DN621524
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621524 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.189e-48 Identity = 89/128 (69.53%), Postives = 107/128 (83.59%), Query Frame = 3 Query: 3 NFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 386 +FTVTSKA D++ +F+ELY FKW ++N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF + GP +E+CG++C Sbjct: 965 SFTVTSKAGDDE-EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNNGPLLEECGLDC 1091
BLAST of DN621524 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.648e-48 Identity = 86/112 (76.79%), Postives = 98/112 (87.50%), Query Frame = 3 Query: 3 NFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPF 338 NFTVTSKA+DEDGDF ELY+FKW ++NL+G+VAGVSYA+NSGYQSWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV+VWS+LLASIFSLLWVR++PF Sbjct: 953 NFTVTSKATDEDGDFAELYIFKWTALLIPPTTVLLVNLIGIVAGVSYAVNSGYQSWGPLFGKLFFALWVIAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRINPF 1064
BLAST of DN621524 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.516e-48 Identity = 88/128 (68.75%), Postives = 106/128 (82.81%), Query Frame = 3 Query: 3 NFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 386 +FTVTSK D++ +F+ELY FKW ++N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF + GP +E+CG++C Sbjct: 965 SFTVTSKGGDDE-EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEECGLDC 1091
BLAST of DN621524 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.516e-48 Identity = 88/128 (68.75%), Postives = 106/128 (82.81%), Query Frame = 3 Query: 3 NFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 386 +FTVTSK D++ +F+ELY FKW ++N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF + GP +E+CG++C Sbjct: 965 SFTVTSKGGDDE-EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEECGLDC 1091
BLAST of DN621524 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.516e-48 Identity = 88/128 (68.75%), Postives = 106/128 (82.81%), Query Frame = 3 Query: 3 NFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 386 +FTVTSK D++ +F+ELY FKW ++N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF + GP +E+CG++C Sbjct: 966 SFTVTSKGGDDE-EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEECGLDC 1092
BLAST of DN621524 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.006e-47 Identity = 87/114 (76.32%), Postives = 97/114 (85.09%), Query Frame = 3 Query: 3 NFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTT 344 NFTVTSKASDEDGDF ELY+FKW ++NLVG+VAGVSYAINSGYQSWGPL GKL FAFWV+ HLYPFLKGL+GRQNRTPTIV+VWS LLASIFSLLWVR++PF + Sbjct: 940 NFTVTSKASDEDGDFAELYVFKWTSLLIPPTTILLVNLVGIVAGVSYAINSGYQSWGPLMGKLLFAFWVVAHLYPFLKGLLGRQNRTPTIVIVWSALLASIFSLLWVRINPFVS 1053
BLAST of DN621524 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.927e-47 Identity = 88/129 (68.22%), Postives = 105/129 (81.40%), Query Frame = 3 Query: 3 NFTVTSKAS-DEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 386 NFTVTSKA+ DE F ELY+FKW +IN+VG+VAGVS A+N+GY SWGPLFGKLFF+FWVI+HLYPFLKGLMGRQNRTPTIVV+WSILLASIFSL+WVR+DPF + GP ++ CG++C Sbjct: 935 NFTVTSKAAADETDAFGELYLFKWTTLLVPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVILHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFIPKPKGPVLKPCGVSC 1063
BLAST of DN621524 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.041e-44 Identity = 84/128 (65.62%), Postives = 105/128 (82.03%), Query Frame = 3 Query: 3 NFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 386 NFTVTSKA+D DG+F+ELY+FKW +IN+VGV+ GVS AIN+GY SWGPLFG+LFFA WVIVHLYPFLKGL+G+Q+R PTI++VWSILLASI +LLWVRV+PF ++ GP +E CG++C Sbjct: 961 NFTVTSKAAD-DGEFSELYIFKWTSLLIPPTTLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRVPTIILVWSILLASILTLLWVRVNPFVSK-DGPVLEICGLDC 1086
BLAST of DN621524 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 8.814e-44 Identity = 81/128 (63.28%), Postives = 105/128 (82.03%), Query Frame = 3 Query: 3 NFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 386 NFTVTSKA+D DG+F+ELY+FKW +IN++GV+ G+S AI++GY SWGPLFG+LFFAFWVI+HLYPFLKGL+G+Q+R PTI++VWSILLASI +LLWVRV+PF + GP +E CG++C Sbjct: 943 NFTVTSKAAD-DGEFSELYIFKWTSLLIPPTTLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVILHLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVRVNPFVAK-GGPILEICGLDC 1068
BLAST of DN621524 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 1.504e-43 Identity = 81/128 (63.28%), Postives = 104/128 (81.25%), Query Frame = 3 Query: 3 NFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 386 NFTVTSKA+D DG+F++LY+FKW +IN++GV+ GVS AI++GY SWGPLFG+LFFA WVI+HLYPFLKGL+G+Q+R PTI+VVWSILLASI +LLWVRV+PF + GP +E CG++C Sbjct: 958 NFTVTSKAAD-DGEFSDLYLFKWTSLLIPPMTLLIINVIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIIVVWSILLASILTLLWVRVNPFVAK-GGPILEICGLDC 1083 The following BLAST results are available for this feature:
BLAST of DN621524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621524 ID=DN621524; Name=DN621524; organism=Citrus sinensis; type=EST; length=663bpback to top |