DN621435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621435 vs. ExPASy Swiss-Prot
Match: QCR1_HUMAN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens GN=UQCRC1 PE=1 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 2.701e-37 Identity = 75/182 (41.21%), Postives = 115/182 (63.19%), Query Frame = -3 Query: 212 PDSMTLMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 757 PD++ L V A++G ++ GG H+ S LA N++ +S F+ Y +TGL G + V +DD+ + + + +L +E++V R +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI VDAS V+ + +++IYD+ A+A GPI+ LPDYN R +W R+ Sbjct: 299 PDNVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKLCQSFQTFSICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCTSATESEVARGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREICSKYIYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 480
BLAST of DN621435 vs. ExPASy Swiss-Prot
Match: MPPB_DICDI (Mitochondrial-processing peptidase subunit beta OS=Dictyostelium discoideum GN=mppB PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.900e-36 Identity = 74/181 (40.88%), Postives = 114/181 (62.98%), Query Frame = -3 Query: 215 PDSMTLMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNR 757 PD L ++Q M+G+WN+ GK++ S L + V ++AES F T Y+DTGLFG Y V +P+ +DDL ++ E ++A ++ +V R + +L ++ L+ DGTS V E IGRQ+LT GRR+ E++ RI+ + + V+RVA+ + D A+ A+GPI PDYN+ + TYWNR Sbjct: 288 PDYFVLELIQTMIGNWNRGIAAGKNIASNLGEIVATEDLAESYSTFFTCYQDTGLFGNYGVCQPERVDDLVAEMLKEWQRIATSCNKNEVERNKQKLLATTLMQYDGTSKVCEGIGRQILTLGRRLSPFEVYTRINEITVADVQRVASTLLRDVSPAVTAIGPIANYPDYNFVKGWTYWNR 468
BLAST of DN621435 vs. ExPASy Swiss-Prot
Match: MPPB_NEUCR (Mitochondrial-processing peptidase subunit beta OS=Neurospora crassa GN=pep PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.135e-35 Identity = 83/170 (48.82%), Postives = 120/170 (70.59%), Query Frame = -3 Query: 248 DSMTLMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVA-KPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDY 754 D T +V QA++G+++K H GS+L+ V +++A S M+F+T+Y DTGL+G+Y V K D +DDL + + E T+L VSEA+V RA+ QLK+S+LL +DGT+ VAEDIGRQ++T GRR+ AE+ ID+V A V AN+ I+D+DIAI+A+G I+GL DY Sbjct: 295 DYFTGLVTQAIVGNYDKALGNAPHQGSKLSGFVHKHDLATSFMSFSTSYSDTGLWGIYLVTDKLDRVDDLVHFSLREWTRLCSNVSEAEVERAKAQLKASILLSLDGTTAVAEDIGRQIVTTGRRMSPAEIERIIDAVSAKDVMDFANKKIWDQDIAISAVGSIEGLFDY 464
BLAST of DN621435 vs. ExPASy Swiss-Prot
Match: MPPB_LENED (Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes GN=mppB PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.355e-35 Identity = 72/175 (41.14%), Postives = 117/175 (66.86%), Query Frame = -3 Query: 236 PDSMTLMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDC-LDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFR 757 PD +MVMQ++ G+W+++ + S L+ + N +A S M+F+T+Y DTGL+G+Y V++ LDD + + E T+++ +E +V RA++QLK+ LLL +DGT+ VAEDIGRQ++T G+R+ A++ +D+V +KRVA ++++D+D A+AA G I GL DY R Sbjct: 284 PDYFPMMVMQSIFGNWDRSLGASSLLSSRLSHIISSNSLANSFMSFSTSYSDTGLWGIYLVSENLMNLDDTLHFTLKEWTRMSIAPTEGEVERAKSQLKAGLLLSLDGTTAVAEDIGRQIVTSGKRMTPAQIENAVDAVSVDDIKRVAQKYLWDKDFALAAFGNIDGLKDYGRIR 458
BLAST of DN621435 vs. ExPASy Swiss-Prot
Match: MPPB_SCHPO (Probable mitochondrial-processing peptidase subunit beta OS=Schizosaccharomyces pombe GN=qcr1 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.140e-34 Identity = 78/183 (42.62%), Postives = 118/183 (64.48%), Query Frame = -3 Query: 212 PDSMTLMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKP-DCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 757 PD T +VMQA++G+W++ H+ S L+ V +++A S M+F+T+Y DTGL+G+Y V + +DDL + + +L + A+V RA+ QL++SLLL +D T+ +AEDIGRQLLT GRR+ E+ RI + V RVA+ I+D+DIA++A+G I+GL DYN R NR+ Sbjct: 276 PDYFTALVMQAIIGNWDRAMGASPHLSSRLSTIVQQHQLANSFMSFSTSYSDTGLWGIYLVTENLGRIDDLVHFTLQNWARLTV-ATRAEVERAKAQLRASLLLSLDSTTAIAEDIGRQLLTTGRRMSPQEVDLRIGQITEKDVARVASEMIWDKDIAVSAVGSIEGLLDYNRIRSSISMNRW 457
BLAST of DN621435 vs. ExPASy Swiss-Prot
Match: UCR1_CAEEL (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Caenorhabditis elegans GN=ucr-1 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 4.186e-22 Identity = 57/183 (31.15%), Postives = 95/183 (51.91%), Query Frame = -3 Query: 215 DSMTLMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDD---LAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNR 754 D++ L + +G W+ + S L Q++G + ++ FN NYKDTGLFG+Y VA L+D + ++ +E LA +E +V A+NQ +++L +++ + A ++LL G +EL A+I VDA V+ +R +YDRD+A +G + P+Y R W R Sbjct: 288 DALALQIANQFIGQWDVTHATSRTAASRLVQKIGHDHGVHNLQHFNINYKDTGLFGIYFVADAHDLNDTSGIMKSVAHEWKHLASAATEEEVAMAKNQFRTNLYQNLETNTQKAGFNAKELLYTGNLRQLSELEAQIQKVDAGAVREAISRHVYDRDLAAVGVGRTEAFPNYALTRAGMSWWR 470
BLAST of DN621435 vs. ExPASy Swiss-Prot
Match: MPPB_YEAST (Mitochondrial-processing peptidase subunit beta OS=Saccharomyces cerevisiae GN=MAS1 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.045e-21 Identity = 57/182 (31.32%), Postives = 106/182 (58.24%), Query Frame = -3 Query: 230 PDSMTLMVMQAMLGSWNKNSVGGKHMGSELAQRVGIN-EIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTK-----LAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRR 757 PD + QA++G+W++ G + S LA N +A S M+F+T+Y D+GL+G+Y V D + I+ E K + ++S+A+V RA+ QLK++LLL +DG++ + EDIGRQ++T G+R+ E+F ++D + + AN + ++ +++ A+G +P+ ++ + Sbjct: 280 PDYFVALATQAIVGNWDRAIGTGTNSPSPLAVAASQNGSLANSYMSFSTSYADSGLWGMYIVT--DSNEHNVQLIVNEILKEWKRIKSGKISDAEVNRAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYRLQNKPVSMVALGNTSTVPNVSYIEEK 459
BLAST of DN621435 vs. ExPASy Swiss-Prot
Match: MPPA_YEAST (Mitochondrial-processing peptidase subunit alpha OS=Saccharomyces cerevisiae GN=MAS2 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.377e-17 Identity = 55/155 (35.48%), Postives = 88/155 (56.77%), Query Frame = -3 Query: 317 PDSMTLMVMQAMLGSWNKNSVGG--KHMGSELAQRVGINE--IAESMMAFNTNYKDTGLFGV----YAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVA 757 PD L +Q +LG S GG K M S L V +N+ E+ +AFN +Y D+G+FG+ A P ++ +A + R++E +V+RA+NQLKSSLL++++ ED+GRQ+L +GR+IP E+ ++I+ + + RVA Sbjct: 271 PDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTHV-LNQYYFVENCVAFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSSLLMNLESKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDDISRVA 424
BLAST of DN621435 vs. ExPASy Swiss-Prot
Match: QCR1_EUGGR (Ubiquinol-cytochrome-c reductase complex core protein I, mitochondrial OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.104e-17 Identity = 52/172 (30.23%), Postives = 92/172 (53.49%), Query Frame = -3 Query: 305 PDSMTLMVMQAMLGSWNKNSVGGKHMGSELA----------------QRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCL-----DDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFI 757 PD++ + V++ +LGS++++ + A + G N I S+ AF Y D GL G YA+A+P +++ + M E +++ +SE + RA+NQLK +L +DGT+ +A+DIGRQ+L++G R+P A F ++D++ + RV R + Sbjct: 275 PDAIKIKVLEQLLGSYSRDKGEAAYSCFARAIVMDFYDPKVGQFFRPNKAGHNPI-HSLNAFWAPYSDVGLLGFYAIAEPGKSYGHEWENILHYAMRELIRVSRNISEEEFERAKNQLKLQTMLQLDGTTNIADDIGRQVLSFGARVPLASFFEQLDAISREDLIRVGPRVL 445
BLAST of DN621435 vs. ExPASy Swiss-Prot
Match: MPPA_SOLTU (Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.032e-17 Identity = 58/176 (32.95%), Postives = 90/176 (51.14%), Query Frame = -3 Query: 245 DSMTLMVMQAMLGSWNKNSVGG--KHMGSELAQRVGINEIAE--SMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY--RVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYN 754 +SMTL V+Q ++G S GG K M S L RV +N+ + + AF++ Y +TGLFG+ D + E +A V + + RA+ KS++L++++ +EDIGRQLLTYG R P ID+V A + V + I + +A+ G + LP Y+ Sbjct: 322 ESMTLTVLQMLMGGGGSFSAGGPGKGMYSRLYLRV-LNQYPQIHAFSAFSSIYNNTGLFGIQGTTSSDFGPQAVDVAVKELIAVANPSEVDQVQLNRAKQATKSAILMNLESRMVASEDIGRQLLTYGERNPVEHFLKAIDAVSAKDIASVVQKLI-SSPLTMASYGDVLSLPSYD 495 The following BLAST results are available for this feature:
BLAST of DN621435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621435 ID=DN621435; Name=DN621435; organism=Citrus sinensis; type=EST; length=759bpback to top |