DN621419

Overview
NameDN621419
Unique NameDN621419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_KLEP3 (L-lactate dehydrogenase [cytochrome] OS=Klebsiella pneumoniae (strain 342) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19
Identity = 66/230 (28.70%), Postives = 106/230 (46.09%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  + TL+ N    S +  R RILR++S + + TT+    ++MP  +AP     M    GE          G   TLS+ +   +EEV+ T     +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +  +  P+  L+ Y             GL            Y+G+    +D     ++AN  D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYAEHTLRRNVEDLSDVALRQRILRNMSDLSLETTLFNEKLAMPTALAPVGLCGMYARRGEVQAAGAADDKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAALRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGQPTGLED--YIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_ECO27 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19
Identity = 63/230 (27.39%), Postives = 104/230 (45.22%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  ++TL  N    S +  R RIL+++S + + TT+    +SMP+ + P     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++ N  D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYSEYTLHRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBY (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain AYE) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19
Identity = 62/227 (27.31%), Postives = 103/227 (45.37%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLY-------IGKMDKTDD-----------SGLASYV---ANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  ++TL+ N    S I  R R+L D+S + + T +    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +    P     +  + ++       +G M +  D           +GL  Y+    +  D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYAEYTLKRNVQDLSEIALRQRVLNDMSALSLETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSVFHPHWSWNVGLMGRPHDLGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBT (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=lldD PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19
Identity = 62/227 (27.31%), Postives = 103/227 (45.37%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLY-------IGKMDKTDD-----------SGLASYV---ANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  ++TL+ N    S I  R R+L D+S + + T +    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +    P     +  + ++       +G M +  D           +GL  Y+    +  D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYAEYTLKRNVQDLSEIALRQRVLNDMSALSLETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSVFHPHWSWNVGLMGRPHDLGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBS (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain SDF) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19
Identity = 62/227 (27.31%), Postives = 103/227 (45.37%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLY-------IGKMDKTDD-----------SGLASYV---ANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  ++TL+ N    S I  R R+L D+S + + T +    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +    P     +  + ++       +G M +  D           +GL  Y+    +  D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYAEYTLKRNVQDLSEIALRQRVLNDMSALSLETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSVFHPHWSWNVGLMGRPHDLGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBC (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain ACICU) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19
Identity = 62/227 (27.31%), Postives = 103/227 (45.37%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLY-------IGKMDKTDD-----------SGLASYV---ANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  ++TL+ N    S I  R R+L D+S + + T +    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +    P     +  + ++       +G M +  D           +GL  Y+    +  D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYAEYTLKRNVQDLSEIALRQRVLNDMSALSLETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSVFHPHWSWNVGLMGRPHDLGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_ACIB5 (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain AB0057) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19
Identity = 62/227 (27.31%), Postives = 103/227 (45.37%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLY-------IGKMDKTDD-----------SGLASYV---ANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  ++TL+ N    S I  R R+L D+S + + T +    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +    P     +  + ++       +G M +  D           +GL  Y+    +  D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYAEYTLKRNVQDLSEIALRQRVLNDMSALSLETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSVFHPHWSWNVGLMGRPHDLGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_ACIB3 (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain AB307-0294) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19
Identity = 62/227 (27.31%), Postives = 103/227 (45.37%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLY-------IGKMDKTDD-----------SGLASYV---ANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  ++TL+ N    S I  R R+L D+S + + T +    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +    P     +  + ++       +G M +  D           +GL  Y+    +  D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYAEYTLKRNVQDLSEIALRQRVLNDMSALSLETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSVFHPHWSWNVGLMGRPHDLGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_XANCB (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. campestris (strain B100) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.073e-18
Identity = 63/227 (27.75%), Postives = 106/227 (46.70%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLY-------IGKMDKTDD-----------SGLASYV---ANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  + TL+ N +  + I  R R+LR++S + ++T + G  ++MP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV K R      ++RA+ AG   +  TVD P  G R  D  +    P     +  + +        +G + K  D           +GL  Y+   A   D S++WKD++W++   + P+++KG+L
Sbjct:   28 GAYAEHTLRRNVSDLADIALRQRVLRNMSDLSLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNAPLRRMLQAMTHPRWAWDVGLLGKPHDLGNISTYRGSPTGLQDYIGWLAANFDPSISWKDLEWIREFWTGPMVIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_AGRVS (L-lactate dehydrogenase [cytochrome] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18
Identity = 62/228 (27.19%), Postives = 107/228 (46.93%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY--------EGLYIGKMDKTDDSG-----------LASYV---ANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  + T++ N +  + +  R R+L+ V  +D++TT+    ++MP+++AP     M    GE          G  +TLS+ +   +EEV +      +FQLYV + R      ++RA  AG + +  TVD P  G R  D  +  +  P+ +L+            + +G + K  D G           LA YV       D S+ WKD++W++     P+++KG+L
Sbjct:   28 GAYSEHTMRRNIDDLADLALRQRVLKSVGTVDISTTLFDEELAMPVVLAPVGLTGMYARRGEVQAARAAEKKGIPLTLSTVSVCPIEEVQAASNRPIWFQLYVLRDRGFMKNALERAWAAGIRKLVFTVDMPVPGARYRDAHSG-MSGPNASLRRIIQAVMHPTWAIDVGLLGKPHDLGNVSAYRQQKTNLADYVGWLGENFDPSIGWKDLEWIRDFWKGPMIIKGIL 254          
The following BLAST results are available for this feature:
BLAST of DN621419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_KLEP38.216e-1928.70L-lactate dehydrogenase [cytochrome] OS=Klebsiella... [more]
LLDD_ECO278.216e-1927.39L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ACIBY8.216e-1927.31L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_ACIBT8.216e-1927.31L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_ACIBS8.216e-1927.31L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_ACIBC8.216e-1927.31L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_ACIB58.216e-1927.31L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_ACIB38.216e-1927.31L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_XANCB1.073e-1827.75L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_AGRVS1.401e-1827.19L-lactate dehydrogenase [cytochrome] OS=Agrobacter... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06K24_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621419 ID=DN621419; Name=DN621419; organism=Citrus sinensis; type=EST; length=693bp
TTTCTGACTTTATTGCTTTGCGCTCCCTTCACTGGTTCATTTCTTCTTCT
TTTGTTGTTTAAGGAAGCCAAGGTGCTGAGGACCAGTGGACTCTTCAGGA
AAACCGTAATGCATTCTCTAGGATTCTATTTCGACCACGCATTCTTAGAG
ATGTAAGCAAGATTGACATGACTACAACAGTCTTGGGCTTCAACATTTCC
ATGCCCATCATGATTGCTCCAACGGCATTTCAGAAAATGGCTCATCCTGA
AGGGGAGTGTGCAACAGCAAGGGCAGCCTCAGCAGCTGGCACAATCATGA
CATTATCTTCATGGGCCACTTCCAGTGTCGAGGAAGTTTCTTCAACGGGA
CCTGGAATTCGCTTTTTCCAACTCTATGTGACCAAGCACAGGAATGTGGA
CGCACAGCTAGTAAAAAGAGCTGAAAGGGCTGGTTTTAAGGCGATTGCCC
TTACCGTCGATACTCCAAGGCTTGGCCGTCGGGAAGCTGATATTAAGAAC
AGATTTGTTTTGCCGCCACATCTGACTTTGAAGAACTATGAGGGCTTGTA
TATTGGCAAGATGGATAAGACTGATGACTCTGGATTAGCTTCGTATGTTG
CCAACCAAATTGACCGGTCACTGAACTGGAAGGATGTGAAGTGGCTTCAA
ACAATCACCTCACTGCCAATACTCGTGAAGGGTGTTCTTACTG
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