DN621419

Overview
NameDN621419
Unique NameDN621419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_YERPY (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 64/231 (27.71%), Postives = 103/231 (44.59%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP-------------------------PHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA ++ TL+ N    + I  R R+L+++S++ + T + G   +MP+++ P     M    GE          G   TLS+ +   +EEV+       +FQLYV K R      + RA+ AG K +  TVD P  G R  D  +    P                         PH  L N    Y+GK    +D     ++A   D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPH-DLGNISA-YLGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_YERPS (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis GN=lldD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 64/231 (27.71%), Postives = 103/231 (44.59%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP-------------------------PHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA ++ TL+ N    + I  R R+L+++S++ + T + G   +MP+++ P     M    GE          G   TLS+ +   +EEV+       +FQLYV K R      + RA+ AG K +  TVD P  G R  D  +    P                         PH  L N    Y+GK    +D     ++A   D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPH-DLGNISA-YLGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_YERPP (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis (strain Pestoides F) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 64/231 (27.71%), Postives = 103/231 (44.59%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP-------------------------PHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA ++ TL+ N    + I  R R+L+++S++ + T + G   +MP+++ P     M    GE          G   TLS+ +   +EEV+       +FQLYV K R      + RA+ AG K +  TVD P  G R  D  +    P                         PH  L N    Y+GK    +D     ++A   D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPH-DLGNISA-YLGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_YERPN (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 64/231 (27.71%), Postives = 103/231 (44.59%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP-------------------------PHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA ++ TL+ N    + I  R R+L+++S++ + T + G   +MP+++ P     M    GE          G   TLS+ +   +EEV+       +FQLYV K R      + RA+ AG K +  TVD P  G R  D  +    P                         PH  L N    Y+GK    +D     ++A   D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPH-DLGNISA-YLGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_YERPG (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Angola) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 64/231 (27.71%), Postives = 103/231 (44.59%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP-------------------------PHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA ++ TL+ N    + I  R R+L+++S++ + T + G   +MP+++ P     M    GE          G   TLS+ +   +EEV+       +FQLYV K R      + RA+ AG K +  TVD P  G R  D  +    P                         PH  L N    Y+GK    +D     ++A   D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPH-DLGNISA-YLGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_YERPE (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis GN=lldD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 64/231 (27.71%), Postives = 103/231 (44.59%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP-------------------------PHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA ++ TL+ N    + I  R R+L+++S++ + T + G   +MP+++ P     M    GE          G   TLS+ +   +EEV+       +FQLYV K R      + RA+ AG K +  TVD P  G R  D  +    P                         PH  L N    Y+GK    +D     ++A   D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPH-DLGNISA-YLGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_YERPB (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 64/231 (27.71%), Postives = 103/231 (44.59%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP-------------------------PHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA ++ TL+ N    + I  R R+L+++S++ + T + G   +MP+++ P     M    GE          G   TLS+ +   +EEV+       +FQLYV K R      + RA+ AG K +  TVD P  G R  D  +    P                         PH  L N    Y+GK    +D     ++A   D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPH-DLGNISA-YLGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_YERPA (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 64/231 (27.71%), Postives = 103/231 (44.59%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP-------------------------PHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA ++ TL+ N    + I  R R+L+++S++ + T + G   +MP+++ P     M    GE          G   TLS+ +   +EEV+       +FQLYV K R      + RA+ AG K +  TVD P  G R  D  +    P                         PH  L N    Y+GK    +D     ++A   D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPH-DLGNISA-YLGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_YERP3 (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 64/231 (27.71%), Postives = 103/231 (44.59%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP-------------------------PHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA ++ TL+ N    + I  R R+L+++S++ + T + G   +MP+++ P     M    GE          G   TLS+ +   +EEV+       +FQLYV K R      + RA+ AG K +  TVD P  G R  D  +    P                         PH  L N    Y+GK    +D     ++A   D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPH-DLGNISA-YLGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_SERP5 (L-lactate dehydrogenase [cytochrome] OS=Serratia proteamaculans (strain 568) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 62/227 (27.31%), Postives = 101/227 (44.49%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLY-------IGKMDKTDDSGLAS--------------YVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  + TL+ N    + I  R RILR++S + + T++ G  ++MP+++ P     M    GE          G   TLS+ +   +EEV+       +FQLYV K R      ++RA+ AG K +  TVD P  G R  D  +    P     +  + +        +G   K  D G  S              ++    D S++WKD+ W++     P+++KG+L
Sbjct:   28 GAYAEHTLRRNTEDLAGIALRQRILRNMSDLSLETSLFGEKLAMPVILGPVGLTGMYARRGEVQAAKAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAVRRMLQAVTHPQWAWDVGLCGKPHDLGNVSAYRGKPTSLEDYIGWLGTNFDPSISWKDLDWIREFWQGPMIIKGIL 254          
The following BLAST results are available for this feature:
BLAST of DN621419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_YERPY1.830e-1827.71L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPS1.830e-1827.71L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPP1.830e-1827.71L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPN1.830e-1827.71L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPG1.830e-1827.71L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPE1.830e-1827.71L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPB1.830e-1827.71L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPA1.830e-1827.71L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERP31.830e-1827.71L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_SERP51.830e-1827.31L-lactate dehydrogenase [cytochrome] OS=Serratia p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06K24_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621419 ID=DN621419; Name=DN621419; organism=Citrus sinensis; type=EST; length=693bp
TTTCTGACTTTATTGCTTTGCGCTCCCTTCACTGGTTCATTTCTTCTTCT
TTTGTTGTTTAAGGAAGCCAAGGTGCTGAGGACCAGTGGACTCTTCAGGA
AAACCGTAATGCATTCTCTAGGATTCTATTTCGACCACGCATTCTTAGAG
ATGTAAGCAAGATTGACATGACTACAACAGTCTTGGGCTTCAACATTTCC
ATGCCCATCATGATTGCTCCAACGGCATTTCAGAAAATGGCTCATCCTGA
AGGGGAGTGTGCAACAGCAAGGGCAGCCTCAGCAGCTGGCACAATCATGA
CATTATCTTCATGGGCCACTTCCAGTGTCGAGGAAGTTTCTTCAACGGGA
CCTGGAATTCGCTTTTTCCAACTCTATGTGACCAAGCACAGGAATGTGGA
CGCACAGCTAGTAAAAAGAGCTGAAAGGGCTGGTTTTAAGGCGATTGCCC
TTACCGTCGATACTCCAAGGCTTGGCCGTCGGGAAGCTGATATTAAGAAC
AGATTTGTTTTGCCGCCACATCTGACTTTGAAGAACTATGAGGGCTTGTA
TATTGGCAAGATGGATAAGACTGATGACTCTGGATTAGCTTCGTATGTTG
CCAACCAAATTGACCGGTCACTGAACTGGAAGGATGTGAAGTGGCTTCAA
ACAATCACCTCACTGCCAATACTCGTGAAGGGTGTTCTTACTG
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