DN621419

Overview
NameDN621419
Unique NameDN621419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPK (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain KT2440) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 65/227 (28.63%), Postives = 107/227 (47.14%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADI------KNRFVLPPHLTLKNYEGLY-IGKMDKTDD-----------SGLASYV---ANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  + TL+ N +  + I  R R+L ++S++ + T +    +SMP+ +AP     M    GE          G   T+S+ +   +EEV+       +FQLYV K R      ++RA+ AG K +  TVD P  G R  D       KN  +      + + E  + +G M +  D           +GLA Y+    N  D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYAEHTLRHNVSDLAGIALRQRVLNNMSELSLETKLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAINRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVGVMGRPHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_PSEP1 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 65/227 (28.63%), Postives = 107/227 (47.14%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADI------KNRFVLPPHLTLKNYEGLY-IGKMDKTDD-----------SGLASYV---ANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  + TL+ N +  + I  R R+L ++S++ + T +    +SMP+ +AP     M    GE          G   T+S+ +   +EEV+       +FQLYV K R      ++RA+ AG K +  TVD P  G R  D       KN  +      + + E  + +G M +  D           +GLA Y+    N  D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYAEHTLRHNVSDLAGIALRQRVLNNMSELSLETKLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAINRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVGVMGRPHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_ACIAD (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter sp. (strain ADP1) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 62/230 (26.96%), Postives = 106/230 (46.09%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  ++TL+ N    S+I  R R+L D+S + + T +    +SMP+ ++P     M    GE          G   T+S+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D    S++ +  D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYAEYTLKRNVEDLSQIALRQRVLNDMSSLSLETKLFNETLSMPVALSPVGLTGMYARRGEVQAAVAADKKGIPFTMSTVSVCPIEEVTPAIKRPMWFQLYVLRDRGFMKNALERAKAAGCSTLVFTVDMPVPGARYRDAHSG-MSGPNAAMRRYLQSMMHPQWAWDVGLLGRPHDLGNISKYLGKTTGLED--YISWLGSNFDPSISWKDLEWIREFWDGPMVIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_ERWCT (L-lactate dehydrogenase [cytochrome] OS=Erwinia carotovora subsp. atroseptica GN=lldD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.122e-18
Identity = 62/227 (27.31%), Postives = 102/227 (44.93%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLY-------IGKMDKTDDSGLAS--------------YVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  + TL+ N    + I  R RIL+++S + + T + G  ++MP+++AP     M    GE          G   TLS+ +   +EEV+       +FQLYV K R      ++RA+ AG K +  TVD P  G R  D  +    P     +  + +        +G   K  D G  S              ++A   D S++W+D+ W++     P+++KG+L
Sbjct:   28 GAYGEHTLRRNTADLADIALRQRILKNMSDLSLETQLFGEKLAMPVVLAPVGLTGMYARRGEVQAARAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRSALERAQAAGVKTLVFTVDMPTPGARYRDAHSGMSGPNAAARRMLQAVTHPQWAWDVGLNGKPHDLGNVSAYRGKPTTLEDYIGWLAANFDPSISWQDLAWIREFWKGPMIIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_ENTS8 (L-lactate dehydrogenase [cytochrome] OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.122e-18
Identity = 62/230 (26.96%), Postives = 106/230 (46.09%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  ++TL+ N    S++  R R+L+++S + + TT+    +SMP+ + P     M    GE          G   TLS+ +   +EEV+       +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +  +   +  ++ Y             GL            Y+GK    +D     ++AN  D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYAEYTLKRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALGPVGLCGMYARRGEVQAARAASAKGIPFTLSTVSVCPIEEVAPVMNRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGTNAAMRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIN (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae GN=lldD PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18
Identity = 65/231 (28.14%), Postives = 103/231 (44.59%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP-------------------------PHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            G+  + TL  N +    I  R R+L+D+S++D +  + G  +SMP ++AP     M    GE          G   TLS+ +   +EEV+       +FQLYV K R      ++RA+ AG   +  TVD P  G R  D+ +    P                         PH TL N    Y+G+    DD     ++    D S++WKD++W++     P+++KG+L
Sbjct:   28 GSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPH-TLGNV-STYMGRQIGLDD--YIGWLTENFDPSISWKDLEWIREFWEGPMVIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIG (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain PittGG) GN=lldD PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18
Identity = 65/231 (28.14%), Postives = 103/231 (44.59%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP-------------------------PHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            G+  + TL  N +    I  R R+L+D+S++D +  + G  +SMP ++AP     M    GE          G   TLS+ +   +EEV+       +FQLYV K R      ++RA+ AG   +  TVD P  G R  D+ +    P                         PH TL N    Y+G+    DD     ++    D S++WKD++W++     P+++KG+L
Sbjct:   28 GSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPH-TLGNV-STYMGRQIGLDD--YIGWLTENFDPSISWKDLEWIREFWEGPMVIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIE (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain PittEE) GN=lldD PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18
Identity = 65/231 (28.14%), Postives = 103/231 (44.59%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP-------------------------PHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            G+  + TL  N +    I  R R+L+D+S++D +  + G  +SMP ++AP     M    GE          G   TLS+ +   +EEV+       +FQLYV K R      ++RA+ AG   +  TVD P  G R  D+ +    P                         PH TL N    Y+G+    DD     ++    D S++WKD++W++     P+++KG+L
Sbjct:   28 GSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPH-TLGNV-STYMGRQIGLDD--YIGWLTENFDPSISWKDLEWIREFWEGPMVIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_HAEI8 (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain 86-028NP) GN=lldD PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18
Identity = 65/231 (28.14%), Postives = 103/231 (44.59%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP-------------------------PHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            G+  + TL  N +    I  R R+L+D+S++D +  + G  +SMP ++AP     M    GE          G   TLS+ +   +EEV+       +FQLYV K R      ++RA+ AG   +  TVD P  G R  D+ +    P                         PH TL N    Y+G+    DD     ++    D S++WKD++W++     P+++KG+L
Sbjct:   28 GSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPH-TLGNV-STYMGRQIGLDD--YIGWLTENFDPSISWKDLEWIREFWEGPMVIKGIL 254          
BLAST of DN621419 vs. ExPASy Swiss-Prot
Match: LLDD_ENT38 (L-lactate dehydrogenase [cytochrome] OS=Enterobacter sp. (strain 638) GN=lldD PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18
Identity = 61/230 (26.52%), Postives = 103/230 (44.78%), Query Frame = 3
Query:   72 GAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------------------EGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 689
            GA  + TL+ N    S +  R R+L+++S + + T +    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+ T     +FQLYV + R      ++RA+ AG   +  TVD P  G R  D  +  +   +  ++ Y                           Y+GK    +D     ++AN  D S++WKD++W++     P+++KG+L
Sbjct:   28 GAYSEHTLRRNVEDLSEVALRQRVLKNMSDLSLETKLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADARGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGANAAMRRYWQAVTHPQWAWDVGVNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGIL 254          
The following BLAST results are available for this feature:
BLAST of DN621419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_PSEPK1.830e-1828.63L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEP11.830e-1828.63L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_ACIAD1.830e-1826.96L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_ERWCT3.122e-1827.31L-lactate dehydrogenase [cytochrome] OS=Erwinia ca... [more]
LLDD_ENTS83.122e-1826.96L-lactate dehydrogenase [cytochrome] OS=Enterobact... [more]
LLDD_HAEIN4.078e-1828.14L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEIG4.078e-1828.14L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEIE4.078e-1828.14L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEI84.078e-1828.14L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_ENT384.078e-1826.52L-lactate dehydrogenase [cytochrome] OS=Enterobact... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06K24_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621419 ID=DN621419; Name=DN621419; organism=Citrus sinensis; type=EST; length=693bp
TTTCTGACTTTATTGCTTTGCGCTCCCTTCACTGGTTCATTTCTTCTTCT
TTTGTTGTTTAAGGAAGCCAAGGTGCTGAGGACCAGTGGACTCTTCAGGA
AAACCGTAATGCATTCTCTAGGATTCTATTTCGACCACGCATTCTTAGAG
ATGTAAGCAAGATTGACATGACTACAACAGTCTTGGGCTTCAACATTTCC
ATGCCCATCATGATTGCTCCAACGGCATTTCAGAAAATGGCTCATCCTGA
AGGGGAGTGTGCAACAGCAAGGGCAGCCTCAGCAGCTGGCACAATCATGA
CATTATCTTCATGGGCCACTTCCAGTGTCGAGGAAGTTTCTTCAACGGGA
CCTGGAATTCGCTTTTTCCAACTCTATGTGACCAAGCACAGGAATGTGGA
CGCACAGCTAGTAAAAAGAGCTGAAAGGGCTGGTTTTAAGGCGATTGCCC
TTACCGTCGATACTCCAAGGCTTGGCCGTCGGGAAGCTGATATTAAGAAC
AGATTTGTTTTGCCGCCACATCTGACTTTGAAGAACTATGAGGGCTTGTA
TATTGGCAAGATGGATAAGACTGATGACTCTGGATTAGCTTCGTATGTTG
CCAACCAAATTGACCGGTCACTGAACTGGAAGGATGTGAAGTGGCTTCAA
ACAATCACCTCACTGCCAATACTCGTGAAGGGTGTTCTTACTG
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