DN621410

Overview
NameDN621410
Unique NameDN621410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN621410 vs. ExPASy Swiss-Prot
Match: GRPE2_MOUSE (GrpE protein homolog 2, mitochondrial OS=Mus musculus GN=Grpel2 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.532e-11
Identity = 32/78 (41.03%), Postives = 53/78 (67.95%), Query Frame = 3 
Query:  348 ELNDKYKRALAENENIRNRLNKQIQETKLFAIQGFCKDLLEVADVLNKATECVPK-TEVTDKNPHLKNLYEGLTMTES 578
            +L  +Y+RA+A+ ENIR R  + +++ K+F IQ FCKDL+EVAD+L K  +C  +  E  D    L+ +++GL++ E+
Sbjct:   74 DLTLRYQRAVADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADILEKTAKCCSEGAEPEDHRRTLEKVFQGLSLLEA 151
The following BLAST results are available for this feature:
BLAST of DN621410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
GRPE2_MOUSE1.532e-1141.03GrpE protein homolog 2, mitochondrial OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06K19_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621410 ID=DN621410; Name=DN621410; organism=Citrus sinensis; type=EST; length=583bp
TTTTTTTTTTTTTTTTTACAAACTTCTCGAAAAATCAGCGAAGTAAAAGA
ATGATGCAACTGAAAGCTTGATTAGTAGTTTGGTTTTTTGTCAAAAAAAT
GTCTACCATTCATAAGTTATGGACTTGTGGACGTGTTGCAACGAACACGG
CCTCATTAAATTTAAAAAATTCTCCAGCAATCAAATATCCGACATATTCC
AGTTACCGAGGTATTTGGAGTTCCTTTCTGAAACGAAAAGAAGCTTCGGA
TCCTGCACAAAAGGTCGAAAAAGAGAGTGCTGAAGGCTCGGACCCACAAG
TTGAGGAACTGCTAAAAGCGCTCGAAGAAATGAAAGAGAATCGCGACGAA
TTAAATGATAAGTATAAACGAGCTCTAGCTGAAAATGAAAACATACGTAA
TCGGTTAAATAAACAGATTCAAGAAACTAAATTATTCGCCATTCAAGGAT
TTTGTAAAGATTTACTCGAGGTAGCGGATGTGCTGAACAAAGCTACCGAG
TGTGTTCCAAAAACTGAGGTTACGGATAAGAATCCACATCTTAAAAATCT
GTACGAAGGCTTGACGATGACCGAAAGTATTTT
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