DN621408

Overview
NameDN621408
Unique NameDN621408
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: S17A9_MOUSE (Solute carrier family 17 member 9 OS=Mus musculus GN=Slc17a9 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13
Identity = 43/125 (34.40%), Postives = 64/125 (51.20%), Query Frame = 2
Query:  326 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTS---LLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERA 691
            +L L   L    RV M V  V +S   GW++  +GIV SSF WGY ++ + GG L D  GG+ ++    + W   T  TP  A      L  L   R + GL +GV  PA+ +++++    +ERA
Sbjct:   40 ILLLGTCLLYCARVTMPVCTVAMSQDFGWNKKEAGIVLSSFFWGYCLTQVVGGHLGDRIGGEKVILLSASAWGFITVTTPLLAHLGSGHLAFLTFSRILTGLLQGVYFPALTSLLSQKVQESERA 164          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: S17A9_HUMAN (Solute carrier family 17 member 9 OS=Homo sapiens GN=SLC17A9 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13
Identity = 44/133 (33.08%), Postives = 68/133 (51.13%), Query Frame = 2
Query:  329 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAM---RAVVGLAEGVALPAMNNMVARWFPXTERARAVAIAMGG 718
            L L   L    R  M +  V +S   GW++  +GIV SSF WGY ++ + GG L D  GG+ ++    + W   T +TP  A  S   L  M   R ++GL +GV  PA+ +++++    +ERA   +I   G
Sbjct:   30 LLLGTCLLYCARSSMPICTVSMSQDFGWNKKEAGIVLSSFFWGYCLTQVVGGHLGDRIGGEKVILLSASAWGSITAVTPLLAHLSSAHLAFMTFSRILMGLLQGVYFPALTSLLSQKVRESERAFTYSIVGAG 162          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: YLD2_CAEEL (Uncharacterized transporter C38C10.2 OS=Caenorhabditis elegans GN=C38C10.2 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 39/103 (37.86%), Postives = 55/103 (53.40%), Query Frame = 2
Query:  410 WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAIAMGG 718
            W +  +G+V SSF +GY+ S I GG L   YGGK ++   +   +L T L P AA TS  AL  +RA +G  +G   PAM+ M + W P  E +    +   G
Sbjct:   78 WDKQTTGMVLSSFFYGYIGSQIIGGHLASRYGGKRVVFVTILGSALLTLLNPVAARTSEYALAILRAAIGFLQGATFPAMHTMWSVWGPPLELSVLTGVTYAG 180          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: GARP_ECOLI (Probable galactarate transporter OS=Escherichia coli (strain K12) GN=garP PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 45/141 (31.91%), Postives = 71/141 (50.35%), Query Frame = 2
Query:  308 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL--------TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAI 706
            R  ++ ++ +  A+  ADR  +S+A   ++     S    G + S+F W YL+  I GG L+D +G K +  + +  WSL TFL          WA     +++  MR ++G +E  + PA   +VA WFP  ER  A AI
Sbjct:   16 RYLILLIIFIVTAVNYADRATLSIAGTEVAKELQLSAVSMGYIFSAFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAG----ISMFFMRFMLGFSEAPSFPANARIVAAWFPTKERGTASAI 152          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: GARP_ECO57 (Probable galactarate transporter OS=Escherichia coli O157:H7 GN=garP PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 45/141 (31.91%), Postives = 71/141 (50.35%), Query Frame = 2
Query:  308 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL--------TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAI 706
            R  ++ ++ +  A+  ADR  +S+A   ++     S    G + S+F W YL+  I GG L+D +G K +  + +  WSL TFL          WA     +++  MR ++G +E  + PA   +VA WFP  ER  A AI
Sbjct:   16 RYLILLIIFIVTAVNYADRATLSIAGTEVAKELQLSAVSMGYIFSAFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAG----ISMFFMRFMLGFSEAPSFPANARIVAAWFPTKERGTASAI 152          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: NPT3_MOUSE (Sodium-dependent phosphate transport protein 3 OS=Mus musculus GN=Slc17a2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.051e-12
Identity = 36/103 (34.95%), Postives = 58/103 (56.31%), Query Frame = 2
Query:  410 WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAIAMGG 718
            WS    GI+ SS  +G +++ I  G L   +G K I+  G+ + SL T  TP AAD  ++ ++ +R V G+A+G+A      + A+W P  ER++  +IA  G
Sbjct:   86 WSTETQGIIFSSISYGIILTLIPSGYLAGIFGAKQILGAGLLISSLLTLFTPLAADFGVILVIVIRTVQGMAQGMAWTGQFTIWAKWAPPLERSKLTSIAGSG 188          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: PICO_DROME (Putative inorganic phosphate cotransporter OS=Drosophila melanogaster GN=Picot PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 37/104 (35.58%), Postives = 56/104 (53.85%), Query Frame = 2
Query:  410 WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAIAMGG 718
            WS +  G + SSF +GY+++ I  G L   YG    + +G+ + S+  FL P AA    +  L A+R + GL EG  +P  + M+A+W P  ER+R  A    G
Sbjct:  103 WSSALQGYILSSFFYGYVITQIPFGILAKKYGSLRFLGYGMLINSVFAFLVPVAARGGGVWGLCAVRFIQGLGEGPIVPCTHAMLAKWIPPNERSRMGAAVYAG 206          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: PICO_DROAN (Putative inorganic phosphate cotransporter OS=Drosophila ananassae GN=Picot PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 36/104 (34.62%), Postives = 57/104 (54.81%), Query Frame = 2
Query:  410 WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAIAMGG 718
            W+ +  G + SSF +GY+++ I  G L   YG    + +G+ + S+  FL P AA +  +  L A+R + GL EG  +P  + M+A+W P  ER+R  A    G
Sbjct:   57 WNAALQGYILSSFFYGYVITQIPFGILAKKYGSLRFLGYGMLINSVFAFLVPVAAREGGVWGLCAVRFIQGLGEGPIVPCTHAMLAKWIPPNERSRMGAAVYAG 160          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: S17A4_MOUSE (Putative small intestine sodium-dependent phosphate transport protein OS=Mus musculus GN=Slc17a4 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11
Identity = 31/105 (29.52%), Postives = 57/105 (54.29%), Query Frame = 2
Query:  404 HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAIAMGG 718
            + W+    GI+ SS  +G  ++PI  G +   +G K ++  G+ + S+ T   P AAD  +  L+ +R + G+A+ + L    ++ A+W P  ER++ + IA  G
Sbjct:   98 YDWTPEIQGILLSSLSYGSFIAPIPTGYVAGVFGAKYVVGLGLLISSVLTLFIPLAADAGVALLIVLRVIQGMAQVMVLTGQYSLWAKWAPPQERSQLITIAASG 202          
BLAST of DN621408 vs. ExPASy Swiss-Prot
Match: EXUT_BACSU (Hexuronate transporter OS=Bacillus subtilis GN=exuT PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11
Identity = 42/140 (30.00%), Postives = 68/140 (48.57%), Query Frame = 2
Query:  299 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPXTERARAVAIAMGG 718
            + +++ V+  L LA  +   DR  +S+A   +      S +  G++ SSF  GY +    GG   D YG K+ +   + +WSL  F    A     ++LL +R + G+ EG     +N MV  WFP T+RA  + +   G
Sbjct:    3 SKDKLPVILFLFLAGVINYLDRSALSIAAPFIQDDLTLSATQMGLIFSSFSIGYAIFNFLGGVASDRYGAKLTLFVAMVVWSL--FSGAVALAFGFVSLLIIRILFGMGEGPLSATINKMVNNWFPPTQRASVIGVTNSG 140          
The following BLAST results are available for this feature:
BLAST of DN621408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
S17A9_MOUSE2.503e-1334.40Solute carrier family 17 member 9 OS=Mus musculus ... [more]
S17A9_HUMAN5.576e-1333.08Solute carrier family 17 member 9 OS=Homo sapiens ... [more]
YLD2_CAEEL1.242e-1237.86Uncharacterized transporter C38C10.2 OS=Caenorhabd... [more]
GARP_ECOLI1.242e-1231.91Probable galactarate transporter OS=Escherichia co... [more]
GARP_ECO571.242e-1231.91Probable galactarate transporter OS=Escherichia co... [more]
NPT3_MOUSE8.051e-1234.95Sodium-dependent phosphate transport protein 3 OS=... [more]
PICO_DROME1.373e-1135.58Putative inorganic phosphate cotransporter OS=Dros... [more]
PICO_DROAN1.373e-1134.62Putative inorganic phosphate cotransporter OS=Dros... [more]
S17A4_MOUSE3.059e-1129.52Putative small intestine sodium-dependent phosphat... [more]
EXUT_BACSU3.996e-1130.00Hexuronate transporter OS=Bacillus subtilis GN=exu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06K18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621408 ID=DN621408; Name=DN621408; organism=Citrus sinensis; type=EST; length=726bp
TTTCGCACTCACACTCAACATGAGCTCTTGTTCACTCTCACCGTATCGAC
CAATTTACGTTCACATCAACAACAAATTCATCGGAATTAAATCGATCAAC
CTTCAATTTTCTTCACAATTTCCTTACAAATCAACGAACCGAAAACTCTT
CAGAAACGTTTCTTCGAACAGTGGCTCAGTTGGATTGCGTACGATTGTCG
GATGTCGAGTGAGGACGGGAGTTTCATCGAACGACAAGTCATTTGATTTG
GCGCCGAACGAGGATGAAGCGCTGGCGCCGAATTTTCTGGAGTTTATTAC
TTCGGAGAGAGTCAAAGTTGTGTCGATGCTTGCTTTGGCGCTGGCGCTTT
GTAATGCTGATAGAGTTGTAATGTCGGTGGCGATTGTACCGTTGTCTCTT
GCTCATGGCTGGAGCCGATCGTTTTCCGGTATAGTTCAGTCATCTTTCCT
CTGGGGATACCTGGTTTCACCGATAGCTGGAGGAACTTTGGTGGATTATT
ATGGTGGGAAGATAATCATGGCATGGGGTGTGGCGTTATGGTCATTAGCT
ACTTTTCTTACTCCTTGGGCTGCTGATACTTCTTTATTGGCTCTGCTGGC
AATGCGAGCTGTTGTTGGACTAGCAGAAGGTGTGGCTCTTCCTGCGATGA
ACAATATGGTTGCAAGATGGTTTCCTCNAACAGAACGAGCTAGGGCTGTT
GCTATTGCAATGGGTGGATTTACATC
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