DN621407

Overview
NameDN621407
Unique NameDN621407
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: VGLU1_MOUSE (Vesicular glutamate transporter 1 OS=Mus musculus GN=Slc17a7 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.392e-15
Identity = 49/143 (34.27%), Postives = 78/143 (54.55%), Query Frame = -3
Query:  363 SWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGT-SVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAG 788
            SW F+++L   P YF  V+  ++ +    SA+P  VM     +GG ++D L  R   S T  RK++   GF      L+ +  + S  +A ++L LA+G   F+ SGF VN  +IAP+Y+ +L GISN  GT + ++  +  G
Sbjct:  315 SWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHLVMTIIVPIGGQIADFLRSRHIMSTTNVRKLMNCGGFGMEATLLLVVGYSHSKGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVG 457          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: VGLU1_HUMAN (Vesicular glutamate transporter 1 OS=Homo sapiens GN=SLC17A7 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.392e-15
Identity = 49/143 (34.27%), Postives = 78/143 (54.55%), Query Frame = -3
Query:  363 SWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGT-SVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAG 788
            SW F+++L   P YF  V+  ++ +    SA+P  VM     +GG ++D L  R   S T  RK++   GF      L+ +  + S  +A ++L LA+G   F+ SGF VN  +IAP+Y+ +L GISN  GT + ++  +  G
Sbjct:  315 SWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHLVMTIIVPIGGQIADFLRSRRIMSTTNVRKLMNCGGFGMEATLLLVVGYSHSKGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVG 457          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: VGLU1_BOVIN (Vesicular glutamate transporter 1 OS=Bos taurus GN=SLC17A7 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.392e-15
Identity = 49/143 (34.27%), Postives = 78/143 (54.55%), Query Frame = -3
Query:  363 SWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGT-SVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAG 788
            SW F+++L   P YF  V+  ++ +    SA+P  VM     +GG ++D L  R   S T  RK++   GF      L+ +  + S  +A ++L LA+G   F+ SGF VN  +IAP+Y+ +L GISN  GT + ++  +  G
Sbjct:  315 SWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHLVMTIIVPIGGQIADFLRSRRIMSTTNVRKLMNCGGFGMEATLLLVVGYSHSKGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVG 457          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: VGLU1_XENTR (Vesicular glutamate transporter 1 OS=Xenopus tropicalis GN=slc17a7 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.124e-15
Identity = 48/137 (35.04%), Postives = 77/137 (56.20%), Query Frame = -3
Query:  381 SWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTL-IQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAIL 788
            SW F+++L   P YF  V+  ++ +    SA+P  VM     +GG ++D L  +R  S T  RK++   GF      L+ +  + S  +A ++L LA+G   F+ SGF VN  +IAP+Y+ +L GISN  GT + ++
Sbjct:  315 SWTFYLLLISQPAYFEEVFGFEISKVGLLSALPHLVMTIIVPIGGQIADFLRTKRIMSTTNVRKMMNCGGFGMEATLLLVVGYSHSRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMV 451          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: VGLU2_MOUSE (Vesicular glutamate transporter 2 OS=Mus musculus GN=Slc17a6 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.329e-15
Identity = 48/143 (33.57%), Postives = 78/143 (54.55%), Query Frame = -3
Query:  363 SWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGT-SVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAG 788
            SW F+++L   P YF  V+  ++ +    SAVP  VM     +GG ++D L  +   S T  RKI+   GF      L+ +  + +  +A ++L LA+G   F+ SGF VN  +IAP+Y+ +L GIS+  GT + ++  +  G
Sbjct:  323 SWTFYLLLISQPAYFEEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGYSHTRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISDGVGTLSGMVCPIIVG 465          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: VGLU1_XENLA (Vesicular glutamate transporter 1 OS=Xenopus laevis GN=slc17a7 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.090e-15
Identity = 48/137 (35.04%), Postives = 76/137 (55.47%), Query Frame = -3
Query:  381 SWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTL-IQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAIL 788
            SW F+++L   P YF  V+   + +    SA+P  VM     +GG ++D L  +R  S T  RK++   GF      L+ +  + S  +A ++L LA+G   F+ SGF VN  +IAP+Y+ +L GISN  GT + ++
Sbjct:  315 SWTFYLLLISQPAYFEEVFGFAISKVGLLSALPHLVMTIIVPIGGQIADFLRTKRIMSTTNVRKMMNCGGFGMEATLLLVVGYSHSRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMV 451          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: PICO_DROAN (Putative inorganic phosphate cotransporter OS=Drosophila ananassae GN=Picot PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.892e-14
Identity = 42/145 (28.97%), Postives = 77/145 (53.10%), Query Frame = -3
Query:  363 HSWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQ-RGTSVTLTRKILQSIGFIAPGIALIGLT-AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAG 791
            H++G+  +++ +P Y   V    L+     S++P+  M        +++D +I  +  S+T TRKI+ SIG   PG+ALI  +       +  A LT+ +G+    +SGF +N  ++ P+++G L  I+N +   A +L  + AG
Sbjct:  260 HNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLLSMFISVIADWMISSKRFSLTATRKIINSIGQYGPGLALIAASYTGCDRALTLAILTIGVGLNGGIYSGFKINHLDLTPRFAGFLMSITNCSANLAGLLAPIAAG 404          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: S17A5_SHEEP (Sialin OS=Ovis aries GN=SLC17A5 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.695e-14
Identity = 45/142 (31.69%), Postives = 74/142 (52.11%), Query Frame = -3
Query:  372 HSWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGTSVTL-TRKILQSIGFIAPGIALIGLTAAKSPV-MASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTV 791
            ++W F+ +L+ +P Y   V   ++++  + SAVP+        L G  +D L  R    TL  R++   IG I P I L+          +A A+LT++  +  F  SGF +N  +IAP Y+G+L GI+NT  T   ++G +
Sbjct:  301 YNWTFYTLLTLLPTYMKEVLRFNIQENGFLSAVPYLGCWLCMILSGQAADNLRARWNFSTLWVRRVFSLIGMIGPAIFLVAAGFIGCDYSLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIPGMIGPI 442          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: PICO_DROME (Putative inorganic phosphate cotransporter OS=Drosophila melanogaster GN=Picot PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.239e-13
Identity = 41/148 (27.70%), Postives = 77/148 (52.03%), Query Frame = -3
Query:  354 HSWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQ-RGTSVTLTRKILQSIGFIAPGIALIGLT-AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFV 791
            H++G+  +++ +P Y   V    L+     S++P+  M        +++D +I  +  S T TRK++ SIG   PG+ALI  +       +  A LT+ +G+    +SGF +N  ++ P+++G L  I+N +   A +L  + AG  +
Sbjct:  306 HNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLFSMFISVVADWMISSKRFSHTATRKLINSIGQYGPGVALIAASYTGCDRALTLAILTIGVGLNGGIYSGFKINHLDLTPRFAGFLMSITNCSANLAGLLAPIAAGHLI 453          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: YRT3_CAEEL (Potential vesicular glutamate transporter T07A5.3 OS=Caenorhabditis elegans GN=T07A5.3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.451e-12
Identity = 47/140 (33.57%), Postives = 66/140 (47.14%), Query Frame = -3
Query:  372 SWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGT-SVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTV 788
            SWGFF++L     Y   V H+D++ + + S  P   M       G L D L   G  S    RK + + GF    + L  L   + PV+A   L +A        SGF VN  +IAP+Y+ +L GI+N  G  A + G V
Sbjct:  298 SWGFFLLLGNQLTYMKDVLHIDIKNSGFISIFPQFGMCIVTLATGQLCDYLRSSGKMSTEAVRKSVNTFGFTVEAMMLGCLAFVRDPVIAVTCLVIACTGSGSVLSGFNVNHFDIAPRYAPILMGIANGLGAVAGVGGMV 437          
The following BLAST results are available for this feature:
BLAST of DN621407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
VGLU1_MOUSE2.392e-1534.27Vesicular glutamate transporter 1 OS=Mus musculus ... [more]
VGLU1_HUMAN2.392e-1534.27Vesicular glutamate transporter 1 OS=Homo sapiens ... [more]
VGLU1_BOVIN2.392e-1534.27Vesicular glutamate transporter 1 OS=Bos taurus GN... [more]
VGLU1_XENTR3.124e-1535.04Vesicular glutamate transporter 1 OS=Xenopus tropi... [more]
VGLU2_MOUSE5.329e-1533.57Vesicular glutamate transporter 2 OS=Mus musculus ... [more]
VGLU1_XENLA9.090e-1535.04Vesicular glutamate transporter 1 OS=Xenopus laevi... [more]
PICO_DROAN5.892e-1428.97Putative inorganic phosphate cotransporter OS=Dros... [more]
S17A5_SHEEP7.695e-1431.69Sialin OS=Ovis aries GN=SLC17A5 PE=2 SV=1[more]
PICO_DROME2.239e-1327.70Putative inorganic phosphate cotransporter OS=Dros... [more]
YRT3_CAEEL1.451e-1233.57Potential vesicular glutamate transporter T07A5.3 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06K18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621407 ID=DN621407; Name=DN621407; organism=Citrus sinensis; type=EST; length=796bp
CCCCCCCCTTTTTTTTTAAAAATGAAAACTAGTGCCTGTGGATAAATGCA
CTTTTTATCTTACCTCATACAAGATGCTACAACTTTGGTACAATCAGGGA
TGCAATTATGCAAATATCATACCCTGTACAATTCTTTTATTTTGCAGGGA
AAAAGAGAAAAGAAAAAAAAAAAGCCCTTTTCTTTTAATACAGGATTCAA
CCGCTATTTGGCAGGAGACTTGGACCTCGTTCATAAAGCAGCTTCATCAA
AATTCACTCTCTCTCCTGTAGAAAAGATGATGTAGAAAAGGGCAGAGAGG
AAATATAAGAGCGATGTGAGCAACAGAAACCCTTGGAAAGAGCCCACAAG
CTCCACAAAAAAACCAGCTCCAACTGTTCCTAAAATGGCAGCAAATGTTC
CGGCAGTATTTGAGATTCCGTGTAAAACACCAGAATATTGGGGAGCAATC
TCCTGAAGATTCACAAGAAAACCCGAGTGACTGAAAGATTTCATTCCAAT
GGCTAAAGTCAGCCATGCAGACGCCATTACTGGACTTTTTGCTGCAGTTA
ACCCAATAAGTGCAATTCCCGGTGCGATAAAACCAATTGACTGCAAGATC
TTGCGAGTCAAAGTCACACTTGTGCCCCTCTGTATCAACGTGTCTGACAA
TAAACCACCCAAGTATCCTGTAAATGCCATAACACTCCATGGAACAGCAC
TAAACCATGATGCTTGTCTCAGGTCAACATGATATACAGAGTTGAAGTAG
ATTGGCATCCACGAAAGAATAACAAAAAAACCCCAACTATGCATGG
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