DN621407

Overview
NameDN621407
Unique NameDN621407
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: S17A5_HUMAN (Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.451e-12
Identity = 42/142 (29.58%), Postives = 74/142 (52.11%), Query Frame = -3
Query:  372 HSWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGTSVTL-TRKILQSIGFIAPGIALIGLTAAKSPV-MASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTV 791
            ++W F+ +L+ +P Y   +   ++++  + S++P+        L G  +D L  +    TL  R+I   IG I P + L+          +A A+LT++  +  F  SGF +N  +IAP Y+G+L GI+NT  T   ++G V
Sbjct:  301 YNWTFYTLLTLLPTYMKEILRFNVQENGFLSSLPYLGSWLCMILSGQAADNLRAKWNFSTLCVRRIFSLIGMIGPAVFLVAAGFIGCDYSLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIPGMVGPV 442          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: S17A5_MOUSE (Sialin OS=Mus musculus GN=Slc17a5 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.222e-12
Identity = 39/142 (27.46%), Postives = 74/142 (52.11%), Query Frame = -3
Query:  372 HSWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTL-IQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPV-MASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTV 791
            ++W F+ +L+ +P Y   +   ++++  + SA+P+        L G  +D L ++   S    R+I   +G + P + L+          +A A+LT++  +  F+ SGF +N  +IAP Y+G+L GI+NT  T   + G +
Sbjct:  301 YNWSFYTLLTLLPTYMKEILRFNVQENGFLSALPYFGCWLCMILCGQAADYLRVKWNFSTISVRRIFSLVGMVGPAVFLVAAGFIGCDYSLAVAFLTISTTLGGFASSGFSINHLDIAPSYAGILLGITNTFATIPGMTGPI 442          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: NPT1_MOUSE (Sodium-dependent phosphate transport protein 1 OS=Mus musculus GN=Slc17a1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.222e-12
Identity = 41/146 (28.08%), Postives = 77/146 (52.74%), Query Frame = -3
Query:  354 WGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGT-SVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASA-WLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFV 785
            W   +++++ P + ++V HV++R+    S++P+ +    G L G +SD  + R   S+   RK+  ++G   P I ++ L        ++  +LTLA    SFS+ G L+N  +IAP+Y G L  ++   G F  ++ +  AG  +
Sbjct:  274 WSNSLLVTYTPTFISTVLHVNVRENGLLSSLPYLLAYICGILAGQMSDFFLTRKIFSIVTVRKLFTTLGSFCPVIFIMCLLYLSYNFYSTVIFLTLANSTLSFSYCGQLINALDIAPRYYGFLKAVTALIGMFGGLISSTLAGLIL 419          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: S17A4_MOUSE (Putative small intestine sodium-dependent phosphate transport protein OS=Mus musculus GN=Slc17a4 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.514e-12
Identity = 47/152 (30.92%), Postives = 75/152 (49.34%), Query Frame = -3
Query:  336 WGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGTSVTLT-RKILQSIGFIAPGIALIGLTAAKSPVMAS-AWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSF 785
            W    ++++ P Y +SV   +LR +   SA+P+        LGGLL+D L+ R     +T RK+  ++G +A    L+ L   +S    + A+L L+    S   SG L+N  +IAP+Y+G L G+       A  +    AGFF+     F
Sbjct:  301 WLLSTVMAYTPTYISSVLQANLRDSGILSALPFMFGCVCIILGGLLADFLLSRKILRLVTIRKLFTAVGVLASSGILLPLPWVRSSRSTTMAFLVLSSVFASLCDSGALINFLDIAPRYAGFLKGLLQVFSYLAGGIAPTVAGFFISQDSEF 452          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: NPT1_RAT (Sodium-dependent phosphate transport protein 1 OS=Rattus norvegicus GN=Slc17a1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.202e-12
Identity = 41/146 (28.08%), Postives = 76/146 (52.05%), Query Frame = -3
Query:  354 WGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGT-SVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASA-WLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFV 785
            W   +++++ P + ++  HV++R+    S++P+ +    G + G +SD L+ R   SV   RK+  ++G   P I ++ L        ++  +LTLA    SFS  G L+N  +IAP+Y G L  ++   G F  ++ +  AG  +
Sbjct:  274 WSNNLLVTYTPTFISTTLHVNVRENGLLSSLPYLLAYICGIVAGQMSDFLLSRKIFSVVAVRKLFTTLGIFCPVIFVVCLLYLSYNFYSTVIFLTLANSTLSFSFCGQLINALDIAPRYYGFLKAVTALIGIFGGLISSTLAGLIL 419          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: YLD2_CAEEL (Uncharacterized transporter C38C10.2 OS=Caenorhabditis elegans GN=C38C10.2 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.095e-11
Identity = 40/138 (28.99%), Postives = 67/138 (48.55%), Query Frame = -3
Query:  381 WGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTLIQRGTSVTL-TRKILQSIGFIAPGIALI--GLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAIL 785
            WG + +L  +P +   V  ++L      +++P+         GG+L+DTL  +G   TL TR+    +  I  GI L+  G       V+   ++T  + +    ++GF+VN  EIAP +SG + G  NT    A I+
Sbjct:  285 WGAYTMLVSLPSFLKDVLGLNLSSLGAVASIPYIAYFLAINAGGVLADTLRSKGILSTLNTRRAAMLVALIGQGIFLVASGYCGCGQDVLVIIFITCGMAISGLQYAGFVVNYLEIAPPFSGTVMGTGNTISALAGII 422          
BLAST of DN621407 vs. ExPASy Swiss-Prot
Match: EAT4_CAEEL (Probable vesicular glutamate transporter eat-4 OS=Caenorhabditis elegans GN=eat-4 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.095e-11
Identity = 44/136 (32.35%), Postives = 65/136 (47.79%), Query Frame = -3
Query:  384 SWGFFVILSWMPIYFNSVYHVDLRQASWFSAVPWSVMAFTGYLGGLLSDTL-IQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAI 788
            SW F+++L     Y      + +  +   +A+P  VM     +GG L+D L   +  S T  RKI    GF      ++ +    S   A   L  A+GM  F+ SGF VN  +IAP+Y+ +L G SN  GT A +
Sbjct:  318 SWTFYLLLQNQLTYMKEALGMKIADSGLLAAIPHLVMGCVVLMGGQLADYLRSNKILSTTAVRKIFNCGGFGGEAAFMLIVAYTTSDTTAIMALIAAVGMSGFAISGFNVNHLDIAPRYAAILMGFSNGIGTLAGL 453          
The following BLAST results are available for this feature:
BLAST of DN621407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
S17A5_HUMAN1.451e-1229.58Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2[more]
S17A5_MOUSE4.222e-1227.46Sialin OS=Mus musculus GN=Slc17a5 PE=2 SV=2[more]
NPT1_MOUSE4.222e-1228.08Sodium-dependent phosphate transport protein 1 OS=... [more]
S17A4_MOUSE5.514e-1230.92Putative small intestine sodium-dependent phosphat... [more]
NPT1_RAT7.202e-1228.08Sodium-dependent phosphate transport protein 1 OS=... [more]
YLD2_CAEEL2.095e-1128.99Uncharacterized transporter C38C10.2 OS=Caenorhabd... [more]
EAT4_CAEEL2.095e-1132.35Probable vesicular glutamate transporter eat-4 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06K18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621407 ID=DN621407; Name=DN621407; organism=Citrus sinensis; type=EST; length=796bp
CCCCCCCCTTTTTTTTTAAAAATGAAAACTAGTGCCTGTGGATAAATGCA
CTTTTTATCTTACCTCATACAAGATGCTACAACTTTGGTACAATCAGGGA
TGCAATTATGCAAATATCATACCCTGTACAATTCTTTTATTTTGCAGGGA
AAAAGAGAAAAGAAAAAAAAAAAGCCCTTTTCTTTTAATACAGGATTCAA
CCGCTATTTGGCAGGAGACTTGGACCTCGTTCATAAAGCAGCTTCATCAA
AATTCACTCTCTCTCCTGTAGAAAAGATGATGTAGAAAAGGGCAGAGAGG
AAATATAAGAGCGATGTGAGCAACAGAAACCCTTGGAAAGAGCCCACAAG
CTCCACAAAAAAACCAGCTCCAACTGTTCCTAAAATGGCAGCAAATGTTC
CGGCAGTATTTGAGATTCCGTGTAAAACACCAGAATATTGGGGAGCAATC
TCCTGAAGATTCACAAGAAAACCCGAGTGACTGAAAGATTTCATTCCAAT
GGCTAAAGTCAGCCATGCAGACGCCATTACTGGACTTTTTGCTGCAGTTA
ACCCAATAAGTGCAATTCCCGGTGCGATAAAACCAATTGACTGCAAGATC
TTGCGAGTCAAAGTCACACTTGTGCCCCTCTGTATCAACGTGTCTGACAA
TAAACCACCCAAGTATCCTGTAAATGCCATAACACTCCATGGAACAGCAC
TAAACCATGATGCTTGTCTCAGGTCAACATGATATACAGAGTTGAAGTAG
ATTGGCATCCACGAAAGAATAACAAAAAAACCCCAACTATGCATGG
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