DN621406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621406 vs. ExPASy Swiss-Prot
Match: YCF3_SYNPX (Photosystem I assembly protein ycf3 OS=Synechococcus sp. (strain WH8102) GN=ycf3 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.988e-13 Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = -2 Query: 25 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVI 243 +SAQ++G+YAEAL+NY EA++LE +P DR L N+ +I+ SNGE +A+E Y RAL+ N P NM +I Sbjct: 43 LSAQNDGDYAEALENYDEALKLEDNPTDRGETLKNMAIIYMSNGEEERAIETYRRALDENSNQPSCLKNMGLI 115
BLAST of DN621406 vs. ExPASy Swiss-Prot
Match: YCF3_SYNPW (Photosystem I assembly protein ycf3 OS=Synechococcus sp. (strain WH7803) GN=ycf3 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.988e-13 Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = -2 Query: 25 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVI 243 +SAQ++G+YAEAL+NY E+++LE +P DR L N+ +I+ SNGE +AL Y +AL+ NP P NM +I Sbjct: 43 LSAQNDGDYAEALENYEESLKLEENPIDRGETLKNMAIIYMSNGEEDRALATYQKALDENPKQPSCLKNMGLI 115
BLAST of DN621406 vs. ExPASy Swiss-Prot
Match: YCF3_PROMM (Photosystem I assembly protein ycf3 OS=Prochlorococcus marinus (strain MIT 9313) GN=ycf3 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.451e-12 Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = -2 Query: 25 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVI 243 +SAQ+ G+YAEAL+NY E+++LE P+DRS L N+ +I+ SNG+ AL+ Y RAL++N P NM +I Sbjct: 43 LSAQNAGDYAEALENYEESLKLEESPFDRSETLKNMAIIYMSNGDEDLALDTYQRALDQNSNQPSCLKNMGLI 115
BLAST of DN621406 vs. ExPASy Swiss-Prot
Match: YCF3_PROM4 (Photosystem I assembly protein ycf3 OS=Prochlorococcus marinus (strain MIT 9211) GN=ycf3 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.451e-12 Identity = 33/72 (45.83%), Postives = 51/72 (70.83%), Query Frame = -2 Query: 25 SAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVI 240 +AQ+ G+Y+EAL+NY E+++LE +P DR L N+ +I+ SNG+ +ALE Y +AL++NP P NM +I Sbjct: 44 AAQNNGDYSEALENYEESLKLEENPVDRGETLKNMAIIYMSNGDEDRALETYVKALDQNPKQPSCLKNMGLI 115
BLAST of DN621406 vs. ExPASy Swiss-Prot
Match: YCF3_PROM3 (Photosystem I assembly protein ycf3 OS=Prochlorococcus marinus (strain MIT 9303) GN=ycf3 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.451e-12 Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = -2 Query: 25 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVI 243 +SAQ+ G+YAEAL+NY E+++LE P+DRS L N+ +I+ SNG+ AL+ Y RAL++N P NM +I Sbjct: 43 LSAQNAGDYAEALENYEESLKLEESPFDRSETLKNMAIIYMSNGDEDLALDTYQRALDQNSNQPSCLKNMGLI 115
BLAST of DN621406 vs. ExPASy Swiss-Prot
Match: YCF3_PROMA (Photosystem I assembly protein ycf3 OS=Prochlorococcus marinus GN=ycf3 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.406e-12 Identity = 33/72 (45.83%), Postives = 50/72 (69.44%), Query Frame = -2 Query: 25 SAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVI 240 +AQ+ G+Y+EAL+NY E+++LE + DR L N+ +I+ SNG+ KAL+ Y +ALE+NP P NM +I Sbjct: 44 AAQNNGDYSEALENYEESLKLEENAIDRGETLKNMAIIYMSNGDEDKALDTYQKALEQNPKQPSCLKNMGLI 115 The following BLAST results are available for this feature:
BLAST of DN621406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621406 ID=DN621406; Name=DN621406; organism=Citrus sinensis; type=EST; length=793bpback to top |