DN621406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621406 vs. ExPASy Swiss-Prot
Match: YCF3_ORYSA (Photosystem I assembly protein ycf3 OS=Oryza sativa GN=ycf3 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.626e-38 Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = -2 Query: 16 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 243 M AQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY Sbjct: 43 MLAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 118
BLAST of DN621406 vs. ExPASy Swiss-Prot
Match: YCF3_NANDO (Photosystem I assembly protein ycf3 OS=Nandina domestica GN=ycf3 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.626e-38 Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = -2 Query: 16 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 243 MSAQSEGNYAEALQNYYEA RLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY Sbjct: 43 MSAQSEGNYAEALQNYYEATRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 118
BLAST of DN621406 vs. ExPASy Swiss-Prot
Match: YCF3_MAIZE (Photosystem I assembly protein ycf3 OS=Zea mays GN=ycf3 PE=2 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 2.626e-38 Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = -2 Query: 16 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 243 M AQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY Sbjct: 43 MLAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 118
BLAST of DN621406 vs. ExPASy Swiss-Prot
Match: YCF3_CUSEX (Photosystem I assembly protein ycf3 OS=Cuscuta exaltata GN=ycf3 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.626e-38 Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = -2 Query: 16 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 243 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEH KALEYYFRALERNPFLPQAFNNMAVICHY Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHMKALEYYFRALERNPFLPQAFNNMAVICHY 118
BLAST of DN621406 vs. ExPASy Swiss-Prot
Match: YCF3_IPOPU (Photosystem I assembly protein ycf3 OS=Ipomoea purpurea GN=ycf3 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.480e-38 Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = -2 Query: 16 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 243 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQA NNMAVICHY Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQACNNMAVICHY 118
BLAST of DN621406 vs. ExPASy Swiss-Prot
Match: YCF3_CALFG (Photosystem I assembly protein ycf3 OS=Calycanthus floridus var. glaucus GN=ycf3 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.480e-38 Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = -2 Query: 16 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 243 MSAQSEGNYAEALQNYYEA RLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRA+ERNPFLPQAFNNMAVICHY Sbjct: 43 MSAQSEGNYAEALQNYYEATRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRAIERNPFLPQAFNNMAVICHY 118
BLAST of DN621406 vs. ExPASy Swiss-Prot
Match: YCF3_PELHO (Photosystem I assembly protein ycf3 OS=Pelargonium hortorum GN=ycf3 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.851e-38 Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = -2 Query: 16 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 243 MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQA NNMAVICHY Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEMDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQALNNMAVICHY 118
BLAST of DN621406 vs. ExPASy Swiss-Prot
Match: YCF3_CHLSC (Photosystem I assembly protein ycf3 OS=Chloranthus spicatus GN=ycf3 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.851e-38 Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = -2 Query: 16 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 243 MSAQS+GNYAEALQNYYEA RLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY Sbjct: 43 MSAQSDGNYAEALQNYYEATRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 118
BLAST of DN621406 vs. ExPASy Swiss-Prot
Match: YCF3_SORBI (Photosystem I assembly protein ycf3 OS=Sorghum bicolor GN=ycf3 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.303e-37 Identity = 74/76 (97.37%), Postives = 74/76 (97.37%), Query Frame = -2 Query: 16 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 243 M AQSEGNYAEALQNYYEA RLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY Sbjct: 45 MLAQSEGNYAEALQNYYEATRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 120
BLAST of DN621406 vs. ExPASy Swiss-Prot
Match: YCF3_SACOF (Photosystem I assembly protein ycf3 OS=Saccharum officinarum GN=ycf3 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.303e-37 Identity = 74/76 (97.37%), Postives = 74/76 (97.37%), Query Frame = -2 Query: 16 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 243 M AQSEGNYAEALQNYYEA RLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY Sbjct: 43 MLAQSEGNYAEALQNYYEATRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 118 The following BLAST results are available for this feature:
BLAST of DN621406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621406 ID=DN621406; Name=DN621406; organism=Citrus sinensis; type=EST; length=793bpback to top |