DN621404

Overview
NameDN621404
Unique NameDN621404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSI (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica GN=HOX11 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.402e-12
Identity = 42/97 (43.30%), Postives = 62/97 (63.92%), Query Frame = 3
Query:  480 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELKS 770
            + KK RLS +Q   LE++F+  + L P++K+ LA++L L+PRQV VWFQNRRAR K KQ E D        + LK   ++L+ +N  L  E+ EL++
Sbjct:   88 ARKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVD-------CEYLKRCCETLTEENRRLQKELAELRA 177          
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.402e-12
Identity = 42/97 (43.30%), Postives = 61/97 (62.89%), Query Frame = 3
Query:  480 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELKS 770
            + KK RL+  Q   LE NF++ + L P++K  LA++L L+PRQV VWFQNRRAR K KQ E D        + LK   ++L+ +N  L  E+++LK+
Sbjct:  124 ARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVD-------CEFLKKCCETLTDENRRLQKELQDLKA 213          
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.832e-12
Identity = 42/95 (44.21%), Postives = 60/95 (63.16%), Query Frame = 3
Query:  486 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELKS 770
            KK RLS +Q + LE++F + + L P++K  LA +L L+PRQV VWFQNRRAR K KQ E +        + LK  + SL+ +N  L  E+ EL++
Sbjct:   78 KKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEME-------CEYLKRCFGSLTEENRRLQREVEELRA 165          
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.832e-12
Identity = 42/95 (44.21%), Postives = 60/95 (63.16%), Query Frame = 3
Query:  486 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELKS 770
            KK RLS +Q + LE++F + + L P++K  LA +L L+PRQV VWFQNRRAR K KQ E +        + LK  + SL+ +N  L  E+ EL++
Sbjct:   78 KKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEME-------CEYLKRCFGSLTEENRRLQREVEELRA 165          
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSJ (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. japonica GN=HOX19 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.832e-12
Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 3
Query:  480 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELKS 770
            + KK RL+ +Q   LE  F   + L P++KV LA++L L+PRQV VWFQNRRAR K KQ E D        + LK   ++L+ +N  L  E++EL++
Sbjct:  125 TRKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVD-------CEFLKRCCETLTEENRRLQRELQELRA 214          
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSI (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica GN=HOX19 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.832e-12
Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 3
Query:  480 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELKS 770
            + KK RL+ +Q   LE  F   + L P++KV LA++L L+PRQV VWFQNRRAR K KQ E D        + LK   ++L+ +N  L  E++EL++
Sbjct:  125 TRKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVD-------CEFLKRCCETLTEENRRLQRELQELRA 214          
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.832e-12
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 3
Query:  480 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELKS 770
            S KK RLS DQ   LE+ F+  + L P++K  LA++LGL+ RQV VWFQNRRAR K KQ E D        + L+   ++L+ +N  L  E+ EL++
Sbjct:  127 SRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVD-------CEFLRRCCENLTEENRRLQKEVTELRA 216          
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: HAT1_ARATH (Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.392e-12
Identity = 46/94 (48.94%), Postives = 57/94 (60.64%), Query Frame = 3
Query:  486 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELK 767
            KK RLS DQ   LE  F+  N L P++K+ LA++LGL  RQV VWFQNRRAR K KQ E D   LK   +  KL  ++   + EA   E+R LK
Sbjct:  135 KKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVE--KLTEENRRLEKEAA--ELRALK 224          
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: HAT3_ARATH (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.124e-12
Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 3
Query:  480 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELKS 770
            S KK RLS +Q   LE+ F+  + L P++K+ LA++L L+ RQV VWFQNRRAR K KQ E D        + LK   ++L+ +N  L  E+ EL++
Sbjct:  160 SRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVD-------CEYLKRCCENLTDENRRLQKEVSELRA 249          
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: HAT2_ARATH (Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.124e-12
Identity = 46/96 (47.92%), Postives = 58/96 (60.42%), Query Frame = 3
Query:  480 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELK 767
            S KK RLS DQ   LE+ F+  N L P++K+ LA++L L  RQV VWFQNRRAR K KQ E D   LK   +  KL  ++     EA+  E+R LK
Sbjct:  128 SRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVE--KLTEENRRLQKEAM--ELRTLK 219          
The following BLAST results are available for this feature:
BLAST of DN621404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
HOX11_ORYSI1.402e-1243.30Homeobox-leucine zipper protein HOX11 OS=Oryza sat... [more]
HAT22_ARATH1.402e-1243.30Homeobox-leucine zipper protein HAT22 OS=Arabidops... [more]
HOX3_ORYSJ1.832e-1244.21Homeobox-leucine zipper protein HOX3 OS=Oryza sati... [more]
HOX3_ORYSI1.832e-1244.21Homeobox-leucine zipper protein HOX3 OS=Oryza sati... [more]
HOX19_ORYSJ1.832e-1243.30Homeobox-leucine zipper protein HOX19 OS=Oryza sat... [more]
HOX19_ORYSI1.832e-1243.30Homeobox-leucine zipper protein HOX19 OS=Oryza sat... [more]
HAT4_ARATH1.832e-1244.33Homeobox-leucine zipper protein HAT4 OS=Arabidopsi... [more]
HAT1_ARATH2.392e-1248.94Homeobox-leucine zipper protein HAT1 OS=Arabidopsi... [more]
HAT3_ARATH3.124e-1243.30Homeobox-leucine zipper protein HAT3 OS=Arabidopsi... [more]
HAT2_ARATH3.124e-1247.92Homeobox-leucine zipper protein HAT2 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06K16_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621404 ID=DN621404; Name=DN621404; organism=Citrus sinensis; type=EST; length=779bp
TTTTTTTCCTGTTTTCGTTTAAATTCATTTTTATGGGTTCAGAGGGGCAA
CAAGTGTTAAATAGGGAGAAGAAATACGTTGAACTAAAGAGAGAAGAGGA
GTTGTTGTACAATTGTAGTATTATTATACAGAACAGCGCTCTATTTTCAG
ACACGGCAGCTGCTCTTTCAAGTCCTAAAGAAGAAACTCCTCTTAAAGCT
ACTTCTTAAAACTTGAGAGATCCACTTAAAAAAATAAAAAATCAAAAAAA
TTTCCGATCTAAGAAAATAGATCTGCTTACTACAGTCGGCTTCACTTCAT
CATCAGGCATGAAGCGATCACTTTGCAGCTCAGATGATTCCTTGGGTGCT
TTGATGTCCATCTGCCCAGCCACAGACGAGCAGAGTCCGAGAAACAACCA
AGTTTACAGTCGAGAATTCCAGACGATGTTGGACGGTCTGGATGAAGAGG
GGTGTTTAGAAGAATCCGGAGGGCACGTCTCGGAGAAAAAGAGGAGACTG
AGCGTGGATCAGGTGAAGGCCTTGGAGAAGAACTTCGAGGTGGAAAACAA
GCTTGAGCCCGAGAGAAAAGTGAAGTTGGCACAAGAACTTGGGCTGCAGC
CAAGACAAGTTGCTGTTTGGTTCCAAAACCGACGCGCTCGTTGGAAAACC
AAGCAACTTGAAAGAGATTACGGCGTTCTTAAGGCAAATTATGATGCTCT
CAAGCTCAATTATGACTCCCTCTCACACGACAATGAAGCCTTGCTTTAAG
AGATAAGAGAGCTGAAATCAAAGCTGAAT
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