DN621404

Overview
NameDN621404
Unique NameDN621404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: HAT9_ARATH (Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana GN=HAT9 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.960e-12
Identity = 43/97 (44.33%), Postives = 61/97 (62.89%), Query Frame = 3
Query:  480 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELKS 770
            + KK RL+  Q   LE++F+  + L P++K  LA++L L+PRQV VWFQNRRAR K KQ E D        + LK   ++L+ +N  L  EI+ELK+
Sbjct:  111 ARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVD-------CEFLKKCCETLADENIRLQKEIQELKT 200          
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSJ (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. japonica GN=HOX7 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.091e-12
Identity = 43/99 (43.43%), Postives = 57/99 (57.58%), Query Frame = 3
Query:  480 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELKSKL 776
            + KK RLS +Q   LE +F+  + L P++K  LA  L L+PRQV VWFQNRRAR K KQ E D        + LK   + L+ +N  L  E+ EL+  L
Sbjct:  151 ARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVD-------CEHLKRCCERLTRENRRLQREVAELRGTL 242          
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSI (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. indica GN=HOX7 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 9.091e-12
Identity = 43/99 (43.43%), Postives = 57/99 (57.58%), Query Frame = 3
Query:  480 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELKSKL 776
            + KK RLS +Q   LE +F+  + L P++K  LA  L L+PRQV VWFQNRRAR K KQ E D        + LK   + L+ +N  L  E+ EL+  L
Sbjct:  151 ARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVD-------CEHLKRCCERLTRENRRLQREVAELRGAL 242          
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSJ (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. japonica GN=HOX18 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.454e-11
Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  480 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELK 767
            + KK +L+ +Q   LE +F V N L   +K +LA++L L+PRQV VWFQNRRAR K KQ E D        + LK   +SL+ +N+ L  E+ EL+
Sbjct:  113 TRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVD-------CEFLKRCCESLTEENKQLKHELMELR 201          
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSI (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. indica GN=HOX18 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.454e-11
Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  480 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELK 767
            + KK +L+ +Q   LE +F V N L   +K +LA++L L+PRQV VWFQNRRAR K KQ E D        + LK   +SL+ +N+ L  E+ EL+
Sbjct:  113 TRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVD-------CEFLKRCCESLTEENKQLKHELMELR 201          
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.454e-11
Identity = 40/95 (42.11%), Postives = 58/95 (61.05%), Query Frame = 3
Query:  486 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELKS 770
            KK RL+ +Q + LE +F   + L P++K  LA+ L L+PRQ+ VWFQNRRAR K KQ E +        + LK  + SL+ +N  L  E+ EL++
Sbjct:  139 KKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEME-------CEYLKRWFGSLTEENHRLHREVEELRA 226          
BLAST of DN621404 vs. ExPASy Swiss-Prot
Match: HOX26_ORYSJ (Putative homeobox-leucine zipper protein HOX26 OS=Oryza sativa subsp. japonica GN=HOX26 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.892e-11
Identity = 43/96 (44.79%), Postives = 54/96 (56.25%), Query Frame = 3
Query:  480 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLSHDNEALL*EIRELK 767
            S KK RL+ +Q   LE +F   N L    K +LA +LGL  RQV VWFQNRRAR K KQ E       A+ D L+   D L+ DN  L  ++ EL+
Sbjct:  115 SRKKLRLTGEQATLLEDSFRAHNILSHAEKQELAGKLGLSARQVEVWFQNRRARTKLKQTE-------ADCDLLRRWCDHLAADNARLRRDLAELR 203          
The following BLAST results are available for this feature:
BLAST of DN621404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
HAT9_ARATH6.960e-1244.33Homeobox-leucine zipper protein HAT9 OS=Arabidopsi... [more]
HOX7_ORYSJ9.091e-1243.43Homeobox-leucine zipper protein HOX7 OS=Oryza sati... [more]
HOX7_ORYSI9.091e-1243.43Homeobox-leucine zipper protein HOX7 OS=Oryza sati... [more]
HOX18_ORYSJ3.454e-1143.75Homeobox-leucine zipper protein HOX18 OS=Oryza sat... [more]
HOX18_ORYSI3.454e-1143.75Homeobox-leucine zipper protein HOX18 OS=Oryza sat... [more]
ATB17_ARATH3.454e-1142.11Homeobox-leucine zipper protein ATHB-17 OS=Arabido... [more]
HOX26_ORYSJ5.892e-1144.79Putative homeobox-leucine zipper protein HOX26 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06K16_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621404 ID=DN621404; Name=DN621404; organism=Citrus sinensis; type=EST; length=779bp
TTTTTTTCCTGTTTTCGTTTAAATTCATTTTTATGGGTTCAGAGGGGCAA
CAAGTGTTAAATAGGGAGAAGAAATACGTTGAACTAAAGAGAGAAGAGGA
GTTGTTGTACAATTGTAGTATTATTATACAGAACAGCGCTCTATTTTCAG
ACACGGCAGCTGCTCTTTCAAGTCCTAAAGAAGAAACTCCTCTTAAAGCT
ACTTCTTAAAACTTGAGAGATCCACTTAAAAAAATAAAAAATCAAAAAAA
TTTCCGATCTAAGAAAATAGATCTGCTTACTACAGTCGGCTTCACTTCAT
CATCAGGCATGAAGCGATCACTTTGCAGCTCAGATGATTCCTTGGGTGCT
TTGATGTCCATCTGCCCAGCCACAGACGAGCAGAGTCCGAGAAACAACCA
AGTTTACAGTCGAGAATTCCAGACGATGTTGGACGGTCTGGATGAAGAGG
GGTGTTTAGAAGAATCCGGAGGGCACGTCTCGGAGAAAAAGAGGAGACTG
AGCGTGGATCAGGTGAAGGCCTTGGAGAAGAACTTCGAGGTGGAAAACAA
GCTTGAGCCCGAGAGAAAAGTGAAGTTGGCACAAGAACTTGGGCTGCAGC
CAAGACAAGTTGCTGTTTGGTTCCAAAACCGACGCGCTCGTTGGAAAACC
AAGCAACTTGAAAGAGATTACGGCGTTCTTAAGGCAAATTATGATGCTCT
CAAGCTCAATTATGACTCCCTCTCACACGACAATGAAGCCTTGCTTTAAG
AGATAAGAGAGCTGAAATCAAAGCTGAAT
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