DN621401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 1.404e-60 Identity = 103/140 (73.57%), Postives = 121/140 (86.43%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATN CPPN AL+ D GGWCNPP HFDMAEPAF +IAQ RAG+VP+ +RR+ CAK+GGIRFT+ GHSYFNLVLVTNVGGAGDV +VS+KGS++GWQAMS NWG NWQ+ + L+GQ LSF+VTASDGRTVTS+NV P+ W Sbjct: 98 TATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGW 237
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.086e-60 Identity = 103/146 (70.55%), Postives = 126/146 (86.30%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTG------WQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPN AL +D GGWCNPP +HFD+AEPAFL+IA++ AGIVP+SFRR+ CA+KGG+RFTVNGH+YFNLVLVTNVGGAGDV S+++KGS +G WQ MSRNWGQNWQSN+YL+G++LSF+VTA DGR++T +V PA W Sbjct: 103 TATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGW 248
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.336e-60 Identity = 101/140 (72.14%), Postives = 119/140 (85.00%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPNLA +DNGGWCNPP HFD+A P FL+IA+YRAGIVPIS+RR+ C K GGIRFT+NGH YFNLVL+TNV GAGD+ S+KGSKTGW +++RNWGQNWQSN+ L GQSLSF+VT+SD RT TS N+ P+NW Sbjct: 108 TATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNW 247
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.899e-59 Identity = 101/140 (72.14%), Postives = 117/140 (83.57%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPN ++DNGGWCNPP +HFD+A P FL IA+Y+AGIVP+S+RRIPC KKGGIRFT+NG YFNLVLVTNV GAGDV VS+KGS T W +SRNWGQNWQSN+ L GQSLSF+V SDGR+ TSNN+ P+NW Sbjct: 106 TATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNW 245
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.314e-58 Identity = 100/140 (71.43%), Postives = 114/140 (81.43%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPN AL +DNGGWCNPP HFD+A P FL IA+YRAGIVP+S+RR+PC KKGG+RFT+NG YFNLVL+TNV GAGD+ S+KG+ TGW MSRNWGQNWQSNS L GQ+LSF+VT SD RT TS N PA W Sbjct: 112 TATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGW 251
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 225.713 bits (574), Expect = 1.716e-58 Identity = 99/140 (70.71%), Postives = 118/140 (84.29%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATN CPPN AL ND GGWCNPP QHFDMAEPA+L+I Y GIVP+ ++R+PCAK+GG+RFT+NG YF LVLV+NVGG G + SVSIKGS+TGW AMSRNWG NWQSN+YL+GQSLSF+VT+SDG+T+T +V PA W Sbjct: 109 TATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGW 248
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 6.523e-58 Identity = 98/141 (69.50%), Postives = 120/141 (85.11%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPN AL +D+GGWCNPP HFDM++P F +IA ++AGIVP+S+RR+ C KKGGIRFT+NGHSYFNLVLVTNVGGAGDVH+V++K ++ WQA+SRNWGQNWQS + L+GQ+LSF+VT DGR+V SNN VP W Sbjct: 139 TATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGW 279
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 8.519e-58 Identity = 99/140 (70.71%), Postives = 116/140 (82.86%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPN A +DNGGWCNPP HFD+A P FL+IA+YRAGIVP+SFRR+PC K+GGIRFT+NG YFNLVLVTNV GAG++ + +KG+ T W MSRNWGQNWQSNS L GQSLSF+VT+SD R+ TS N+ PANW Sbjct: 105 TATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANW 244
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.519e-58 Identity = 102/140 (72.86%), Postives = 116/140 (82.86%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPN A +D+GGWCNPP +HFD+A P FL+I YRAGIVP+S+RR+PC K GGIRFTVNG YFNLVLVTNV GAGD++ VS+KGSKT W MSRNWGQNWQSN+ L GQSLSF+VTASD R+ TS NV PA W Sbjct: 110 TATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATW 249
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.579e-56 Identity = 98/140 (70.00%), Postives = 115/140 (82.14%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPN ALS D GGWCNPP +HFDM++PA+ IA YRAGIVP+++RR+PC + GGIRF VNGHSYF LVLVTNVGG+G V + IKGS TGW AMSRNWG NWQSN+ L+GQ+LSF+V A DGR VT+ +V PA W Sbjct: 99 TATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGW 238 The following BLAST results are available for this feature:
BLAST of DN621401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621401 ID=DN621401; Name=DN621401; organism=Citrus sinensis; type=EST; length=675bpback to top |