DN621401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 8.539e-50 Identity = 87/141 (61.70%), Postives = 106/141 (75.18%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGS-KTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPN L +DNGGWCNPP HFDMA+PA+ +I YRAGI+P+ ++R+PC KKGG+RFT+NGH YFNLVLVTNV G + S+ + GS T W M RNWG NW S SYL GQ LSF+VT DG+T+ N+VP+ W Sbjct: 127 TATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGW 267
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.115e-49 Identity = 87/141 (61.70%), Postives = 110/141 (78.01%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATN CPPN SNDNGGWCNPP +HFD++ PAFLQIAQ +AGIVPIS+RR+PC K GGIR+T+ G+ YFNLV+V+NVGGAGDV +S+KG+K W + RNWGQ WQ++ L G+SL+F+V D R TS +V+P +W Sbjct: 116 TATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDW 256
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 194.512 bits (493), Expect = 4.238e-49 Identity = 84/140 (60.00%), Postives = 113/140 (80.71%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATN CPPN AL+ND+GGWCNPP HFDM++PA+ I YRAGIVP+ ++++ C ++GG+RFTV+G +YF LVL+TNV G+G V ++S+KGSKTGW ++RNWG NWQ NS L GQ+LSF+VT++ G+T+ N+VVP W Sbjct: 102 TATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWW 241
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 9.441e-49 Identity = 85/140 (60.71%), Postives = 107/140 (76.43%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATN+CPPN + S D GGWCNPP +HFDM++PA+ IA Y +GIVP+ + R PC + GGIRF + GH Y+ LVLVTNV G+G V + +KGS T W +MSRNWG+NWQSN+YL GQ+LSF+V A DG VT+ +V PANW Sbjct: 101 TATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANW 240
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.233e-48 Identity = 84/141 (59.57%), Postives = 104/141 (73.76%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPN L +DNGGWCNPP HFDMA+PA+ +I Y AGI+P+ ++R+PC KKGG+RFT+NGH YF LVLVTNV AG + S+ + GS T W M+RNWG W S +YL GQ LSF+VT +D +T+ NVVP W Sbjct: 114 TATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGW 254
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.610e-48 Identity = 83/141 (58.87%), Postives = 107/141 (75.89%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPN L +D+GGWCNPP HFDMA+PA+ +I YR GI+P+ ++R+PC KKGG+RFT+NGH YF LVL+TNVG AG + ++ +KGSK+ W AM+ NWG W S +YL GQ LSF+VT +DG+T+ NVV W Sbjct: 109 TATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGW 249
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 1.780e-47 Identity = 83/140 (59.29%), Postives = 110/140 (78.57%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATN CPPN AL +++GGWCNPP HFDMAEPA+LQI Y+AGI+P+ ++++ C ++GGIRFT+ G ++F LVLV+NV G+G V SVS+KG TGW ++RNWG NWQ NS L GQ+LSF VT++ G+T+ NVVP+ W Sbjct: 102 TATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALSFAVTSTGGQTLYIYNVVPSWW 241
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 3.966e-47 Identity = 81/140 (57.86%), Postives = 109/140 (77.86%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 T TN CPPN ALS+++GGWCNPP HFDMAEPA+LQI Y+AGIVP+ ++R+PC K+GG+RFT+ G +YF LVL++NV G+G + SV +KG T +SRNWG NWQS++ L GQ+L+F VT++ G+T+ N+VPA W Sbjct: 107 TGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWW 246
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.276e-45 Identity = 81/140 (57.86%), Postives = 104/140 (74.29%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATN CPPN AL +D GGWCNPP +HFDM++PA+ +I YRAGIVP+ +RR+ C ++GG+RFTV G +F LVLV NV G+G V +VS++G+ TGW MSRNWG NWQS + L GQ LSF VT + G+ + +V PA W Sbjct: 102 TATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGW 241
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.712e-45 Identity = 79/141 (56.03%), Postives = 110/141 (78.01%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTA-SDGRTVTSNNVVPANW 674 TATN CPPN ++ GGWCNPP HFDMA+PAF+++A +RAGI+P+++RR+PC + GG+RF G+SY+ L+ V NVGGAGD+ S+++KGS+T W +MS NWG ++Q+ S L GQSLSF+VT+ + G T+ + NV PANW Sbjct: 109 TATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANW 249 The following BLAST results are available for this feature:
BLAST of DN621401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621401 ID=DN621401; Name=DN621401; organism=Citrus sinensis; type=EST; length=675bpback to top |