DN621399

Overview
NameDN621399
Unique NameDN621399
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621399 vs. ExPASy Swiss-Prot
Match: G6PI_SHEB5 (Glucose-6-phosphate isomerase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=pgi PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.864e-11
Identity = 56/158 (35.44%), Postives = 77/158 (48.73%), Query Frame = 3
Query:  291 GLYLDVSRVGFTDE-----FVEEMEPRFQAAFKAMEELEKGAIANPDEGRMVGHYWLRKPE----LAPNSFLKSQIETTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPD-NPPLKIRFIDNTDPAGIDHQIAQLAPE 734
            GL LD S+   T E     F      + +A  KAM     G I N  E R V H  LR       +A    +  +++ TL+ ++ F   V SG+ K  +S     T I+S+GIGGS LGP+ V++AL P  NP LK  F+ N D   I  ++  L PE
Sbjct:   43 GLLLDYSKNRATAETLDLLFALASNSQLEAKIKAMFA---GEIINTTEKRAVLHTALRSTAEQSIIAEGQDIVPEVQQTLNKMQGFVSSVTSGQWKGYTSKA--ITDIVSIGIGGSFLGPKIVSQALRPYWNPELKCHFVANVDGTSISEKLKLLDPE 195          
BLAST of DN621399 vs. ExPASy Swiss-Prot
Match: G6PI_SHEB9 (Glucose-6-phosphate isomerase OS=Shewanella baltica (strain OS195) GN=pgi PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.424e-11
Identity = 55/158 (34.81%), Postives = 76/158 (48.10%), Query Frame = 3
Query:  291 GLYLDVSRVGFTDE-----FVEEMEPRFQAAFKAMEELEKGAIANPDEGRMVGHYWLRKPE----LAPNSFLKSQIETTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPD-NPPLKIRFIDNTDPAGIDHQIAQLAPE 734
            GL LD S+   T E     F      + +A  KAM     G I N  E R V H  LR       +A    +  +++ TL+ ++ F   V SG+ K  +      T I+S+GIGGS LGP+ V++AL P  NP LK  F+ N D   I  ++  L PE
Sbjct:   43 GLLLDYSKNRATAETLDLLFTLASNSQLEAKIKAMFA---GEIINTTEKRAVLHTALRSTAEQSIIAEGQDIVPEVQQTLNKMQGFVSSVTSGQWKGYTGKA--ITDIVSIGIGGSFLGPKIVSQALRPYWNPELKCHFVANVDGTSISEKLKLLDPE 195          
BLAST of DN621399 vs. ExPASy Swiss-Prot
Match: G6PI_SHEB8 (Glucose-6-phosphate isomerase OS=Shewanella baltica (strain OS185) GN=pgi PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.424e-11
Identity = 55/158 (34.81%), Postives = 76/158 (48.10%), Query Frame = 3
Query:  291 GLYLDVSRVGFTDE-----FVEEMEPRFQAAFKAMEELEKGAIANPDEGRMVGHYWLRKPE----LAPNSFLKSQIETTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPD-NPPLKIRFIDNTDPAGIDHQIAQLAPE 734
            GL LD S+   T E     F      + +A  KAM     G I N  E R V H  LR       +A    +  +++ TL+ ++ F   V SG+ K  +      T I+S+GIGGS LGP+ V++AL P  NP LK  F+ N D   I  ++  L PE
Sbjct:   43 GLLLDYSKNKATAETLDLLFTLASNSQLEAKIKAMFA---GEIINTTEKRAVLHTALRSTAEQSIIAEGQDIVPEVQQTLNKMQGFVSSVTSGQWKGYTGKA--ITDIVSIGIGGSFLGPKIVSQALRPYWNPELKCHFVANVDGTSISEKLKLLDPE 195          
BLAST of DN621399 vs. ExPASy Swiss-Prot
Match: G6PI_SHEB2 (Glucose-6-phosphate isomerase OS=Shewanella baltica (strain OS223) GN=pgi PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.424e-11
Identity = 55/158 (34.81%), Postives = 76/158 (48.10%), Query Frame = 3
Query:  291 GLYLDVSRVGFTDE-----FVEEMEPRFQAAFKAMEELEKGAIANPDEGRMVGHYWLRKPE----LAPNSFLKSQIETTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPD-NPPLKIRFIDNTDPAGIDHQIAQLAPE 734
            GL LD S+   T E     F      + +A  KAM     G I N  E R V H  LR       +A    +  +++ TL+ ++ F   V SG+ K  +      T I+S+GIGGS LGP+ V++AL P  NP LK  F+ N D   I  ++  L PE
Sbjct:   43 GLLLDYSKNRATAETLDLLFALASNSQLEAKIKAMFA---GEIINTTEKRAVLHTALRSTAEQSIIAEGQDIVPEVQQTLNKMQGFVSSVTSGQWKGYTGKA--ITDIVSIGIGGSFLGPKIVSQALRPYWNPELKCHFVANVDGTSISEKLKLLDPE 195          
BLAST of DN621399 vs. ExPASy Swiss-Prot
Match: G6PI_VIBVY (Glucose-6-phosphate isomerase OS=Vibrio vulnificus (strain YJ016) GN=pgi PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.084e-11
Identity = 47/138 (34.06%), Postives = 64/138 (46.38%), Query Frame = 3
Query:  333 FVEEMEPRFQAAFKAMEELEKGAIANPDEGRMVGHYWLR----KPELAPNSFLKSQIETTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLAPE 734
            F    E    AA KAM     G   N  EGR V H  LR    +P L     +   +   L+ ++ F D V+ G+ K  +      T I+++GIGGS LGP  V EALAP    L + F+ N D   I   + ++ PE
Sbjct:   68 FALAKETELSAAIKAMFS---GEAINQTEGRAVLHTALRNRSNQPVLVDGEDVMPAVNAVLEKMKSFTDRVIGGEWKGYTGKA--ITDIVNIGIGGSDLGPYMVTEALAPYKNHLNLHFVSNVDGTHIVETLKKVDPE 200          
BLAST of DN621399 vs. ExPASy Swiss-Prot
Match: G6PI_VIBVU (Glucose-6-phosphate isomerase OS=Vibrio vulnificus GN=pgi PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.084e-11
Identity = 47/138 (34.06%), Postives = 64/138 (46.38%), Query Frame = 3
Query:  333 FVEEMEPRFQAAFKAMEELEKGAIANPDEGRMVGHYWLR----KPELAPNSFLKSQIETTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLAPE 734
            F    E    AA KAM     G   N  EGR V H  LR    +P L     +   +   L+ ++ F D V+ G+ K  +      T I+++GIGGS LGP  V EALAP    L + F+ N D   I   + ++ PE
Sbjct:   68 FALAKETELSAAIKAMFS---GEAINQTEGRAVLHTALRNRSNQPVLVDGEDVMPAVNAVLEKMKSFTDRVIGGEWKGYTGKA--ITDIVNIGIGGSDLGPYMVTEALAPYKNHLNLHFVSNVDGTHIVETLKKVDPE 200          
The following BLAST results are available for this feature:
BLAST of DN621399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
G6PI_SHEB51.864e-1135.44Glucose-6-phosphate isomerase OS=Shewanella baltic... [more]
G6PI_SHEB95.424e-1134.81Glucose-6-phosphate isomerase OS=Shewanella baltic... [more]
G6PI_SHEB85.424e-1134.81Glucose-6-phosphate isomerase OS=Shewanella baltic... [more]
G6PI_SHEB25.424e-1134.81Glucose-6-phosphate isomerase OS=Shewanella baltic... [more]
G6PI_VIBVY7.084e-1134.06Glucose-6-phosphate isomerase OS=Vibrio vulnificus... [more]
G6PI_VIBVU7.084e-1134.06Glucose-6-phosphate isomerase OS=Vibrio vulnificus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06K13_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621399 ID=DN621399; Name=DN621399; organism=Citrus sinensis; type=EST; length=741bp
TTTTCTCAATGGCTTCCCTCTCGAGCCTCTGCTCGTCCTCTCCTTCAATC
AAGTCCCAAACCTCGATCGCTAAACCACTTGTCATTCTTCGTAAAGACTC
GGTCACTTTCCCGACTCGTTTCTCTAAAACCCCGAGTTTAGTCCAGACTC
AGTCCGTGGCTCGCGAAATATCTGCAGATTTATCGAATACAAACGACGTC
GTCCCAAAGAAAGCGAAGAACGGATTAGAGAAAGATCCGCGGGAGTTATG
GAAACGCTACGTTGACTGGCTGTACCAGCACAAGGAGCTGGGACTGTACC
TCGACGTGAGCCGGGTTGGGTTCACGGATGAGTTCGTTGAGGAAATGGAG
CCCCGATTTCAGGCTGCGTTTAAGGCAATGGAGGAGTTGGAGAAGGGCGC
GATTGCGAATCCCGACGAGGGAAGAATGGTGGGACACTATTGGTTGAGAA
AGCCGGAACTCGCTCCTAATTCGTTCTTGAAGTCGCAGATTGAGACCACG
CTTGATGCTGTTCGCAAGTTTGCTGATGAAGTCGTCAGTGGTAAGATTAA
GCCGCCATCCTCTCCGGAGGGTCGTTTTACTTCTATACTATCTGTTGGAA
TTGGAGGTTCAGCTCTTGGACCACAGTTTGTTGCAGAGGCATTGGCTCCT
GATAATCCTCCTTTGAAGATAAGATTCATTGACAATACGGATCCAGCTGG
AATTGATCATCAGATTGCACAGCTTGCCCCCGAGTTGGCTT
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