DN621398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.299e-43 Identity = 83/160 (51.88%), Postives = 111/160 (69.38%), Query Frame = -1 Query: 222 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE-FFFINQSHEQL 698 VT G V G+I+ LR +LY AQLL S++AC+LL++++ G T AL +G+ +V E+++TF L++ YA LDP+ + TI P+ G IVGAN LAGG F GASMNPA SFGPA+ + W NHWVYW+GPL+GG LAG VYE F +N++HE L Sbjct: 94 VTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDPRS-QVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPAMATGVWTNHWVYWIGPLLGGSLAGFVYESLFMVNKTHEPL 252
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.175e-42 Identity = 83/160 (51.88%), Postives = 106/160 (66.25%), Query Frame = -1 Query: 222 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE-FFFINQSHEQL 698 VT G V G+I+ LR +LY AQLL S+ AC+LL+F++ G T AL G+ +V E+++TF L++ YA LDP+ + I P+ G IVGAN LAGG F GASMNPA SFGPAL + W NHWVYW+GPL+GG LAG VYE F + + HE L Sbjct: 92 VTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPRS-QVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGDWTNHWVYWIGPLLGGPLAGFVYESLFLVQKMHEPL 250
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.565e-41 Identity = 82/160 (51.25%), Postives = 107/160 (66.88%), Query Frame = -1 Query: 222 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE-FFFINQSHEQL 698 VT G+I+ R LY AQLL S++AC+LL+++T G T L SG+G +V EI++TF L++ VYAT LDP+ G P+ G IVGAN +AGG F GASMNPA SFGPAL + W +HW+YW+GPLIGG LAG+VYE F + ++HE L Sbjct: 88 VTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPRSSVPG-FGPLLTGLIVGANTIAGGNFSGASMNPARSFGPALATGVWTHHWIYWLGPLIGGPLAGLVYESLFLVKRTHEPL 246
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.620e-38 Identity = 82/165 (49.70%), Postives = 104/165 (63.03%), Query Frame = -1 Query: 219 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFIN-----QSHEQLP 698 VT VGG+I+L R LY AQL GS++ACLLL+ +T G T AL+ GVG V E V TF L+ + AT LDP++ + P+ G +VGAN +AGGA GASMNPA SFGPAL + W +HWVYWVGPL GG LA + YE F++ +H+ LP Sbjct: 90 VTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANTVAGGALTGASMNPARSFGPALATGEWAHHWVYWVGPLAGGPLAVVAYELLFMDVEDAGGAHQPLP 254
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.115e-38 Identity = 83/162 (51.23%), Postives = 104/162 (64.20%), Query Frame = -1 Query: 219 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE--FFFINQSHEQLP 698 VT VGG+++L R LY AQ+L S+ AC LL+++T G T AL+ GVG VV E V TF L++ +YAT LDP+K G P+ G +VGAN +AG A GASMNPA SFGPA+ S W +HWVYWVGPL GG LA +VYE F +H+ LP Sbjct: 85 VTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKLLPGA-GPLLTGLLVGANSVAGAALSGASMNPARSFGPAVASGVWTHHWVYWVGPLAGGPLAVLVYECCFMAAAPTHDLLP 245
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.272e-31 Identity = 68/148 (45.95%), Postives = 93/148 (62.84%), Query Frame = -1 Query: 255 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE 698 VTF V G IS+ + YW +Q++ S +ACL+LK Q + ++ + + A V E V+ F LVYTV+ TA DP++G + PI IGF+ GAN+LA G F G SMNPA +FG A+V S+ N VYWVGPL+GG A +VY+ Sbjct: 90 VTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVLEGVLAFVLVYTVF-TASDPRRGLPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFKNQAVYWVGPLLGGATAALVYD 236
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3) HSP 1 Score: 125.176 bits (313), Expect = 3.385e-28 Identity = 62/156 (39.74%), Postives = 95/156 (60.90%), Query Frame = -1 Query: 255 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLG--------TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE 698 VTF +GG+I++ I YW +Q+LGST ACL+L +++ GQ ++ + + A + E V+TF +VYTV+ DP+ G G + + +G + GA +LA G+ GASMNPA SFGPA+VS + N VYW GP++G +A +V++ Sbjct: 85 VTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEMTGFGAGILEGVLTFMVVYTVHVAG-DPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGHYSNQAVYWAGPMVGAAVAALVHQ 239
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.742e-27 Identity = 66/152 (43.42%), Postives = 91/152 (59.87%), Query Frame = -1 Query: 252 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 698 VTF VG +SLLR I Y AQLLG+ +L VT AL++ GV A EI +T V ++AT + + G LG++A +A+GF + L G + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGLA ++Y+F Sbjct: 71 VTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPIIGGGLASLLYDF 221
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26 Identity = 64/152 (42.11%), Postives = 91/152 (59.87%), Query Frame = -1 Query: 252 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 698 VTF VG +SLLR I Y +AQLLG+ +L VT AL++ GV A + EI +T V ++AT + + G LG++A +A+GF + L G + GA MNPA SF PA+++ ++ NHWVYWVGP+IG GL ++Y+F Sbjct: 71 VTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDF 221
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.426e-26 Identity = 64/152 (42.11%), Postives = 91/152 (59.87%), Query Frame = -1 Query: 252 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 698 VTF VG +SLLR I Y +AQLLG+ +L VT AL++ GV A + EI +T V ++AT + + G LG++A +A+GF + L G + GA MNPA SF PA+++ ++ NHWVYWVGP+IG GL ++Y+F Sbjct: 71 VTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDF 221 The following BLAST results are available for this feature:
BLAST of DN621398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621398 ID=DN621398; Name=DN621398; organism=Citrus sinensis; type=EST; length=698bpback to top |