DN621398

Overview
NameDN621398
Unique NameDN621398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.138e-26
Identity = 65/152 (42.76%), Postives = 90/152 (59.21%), Query Frame = -1
Query:  252 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 698
            VTF   +G  +SL R I Y  AQLLG+     +L  VT        AL++   GV    A   EI +T   V  ++AT  + + G LG+++ +AIGF +    L G  + GASMNPA SF PA+++ ++ NHWVYWVGP+IGG L G+VY+F
Sbjct:   71 VTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVS-LAIGFSLTLGHLFGLYYTGASMNPARSFAPAVLTRNFTNHWVYWVGPIIGGALGGLVYDF 221          
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.138e-26
Identity = 64/152 (42.11%), Postives = 89/152 (58.55%), Query Frame = -1
Query:  252 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 698
            VTF   VG  +SLLR   Y  AQLLG+     +L  VT        AL++   GV    A   EI +T   V  ++AT  + + G LG++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGL  ++Y+F
Sbjct:   71 VTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPIIGGGLGSLLYDF 221          
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.138e-26
Identity = 64/152 (42.11%), Postives = 89/152 (58.55%), Query Frame = -1
Query:  252 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 698
            VTF   VG  +SLLR   Y  AQLLG+     +L  VT        AL++   GV    A   EI +T   V  ++AT  + + G LG++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGL  ++Y+F
Sbjct:   71 VTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPIIGGGLGSLLYDF 221          
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.058e-26
Identity = 63/152 (41.45%), Postives = 88/152 (57.89%), Query Frame = -1
Query:  252 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 698
            VTF   VG  +SLLR   Y  AQLLG+     +L  VT        AL++    V    A   EI +T   V  ++AT  + + G LG++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGL  ++Y+F
Sbjct:   71 VTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSVA-LAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGNFTNHWVYWVGPIIGGGLGSLLYDF 221          
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.218e-26
Identity = 63/152 (41.45%), Postives = 89/152 (58.55%), Query Frame = -1
Query:  252 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 698
            VTF   VG  +SLLR   Y  AQLLG+     +L  VT        AL++   GV    A   EI +T   V  ++AT  + + G +G++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGL  ++Y+F
Sbjct:   69 VTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSNHWVYWVGPIIGGGLGSLLYDF 219          
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.218e-26
Identity = 63/152 (41.45%), Postives = 89/152 (58.55%), Query Frame = -1
Query:  252 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 698
            VTF   VG  +SLLR   Y  AQLLG+     +L  VT        AL++   GV    A   EI +T   V  ++AT  + + G +G++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGL  ++Y+F
Sbjct:   71 VTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSNHWVYWVGPIIGGGLGSLLYDF 221          
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.503e-25
Identity = 63/157 (40.13%), Postives = 88/157 (56.05%), Query Frame = -1
Query:  255 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAL--------DPKKGSLGT-IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE 698
            VTF   +GG I +   + YW +QLLG+T ACL L   + G+      ++  +  +   V E V+TF LVYTV+            D K+    T +  +A+G   GA +LA GA  GASMNPA SFGPA+VS  + N  VYW GP++G  +A +VY+
Sbjct:   88 VTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAGEEVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPARSFGPAVVSGHFKNQAVYWAGPMVGAAVAALVYQ 244          
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 5.975e-25
Identity = 62/154 (40.26%), Postives = 85/154 (55.19%), Query Frame = -1
Query:  246 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 698
            VT G  + G IS+L+   Y I Q +G+     ++K   +G       +SS    +    AV+ E ++TF LV+ V A + DP +  +   AP+A+G  + A  L      GASMNPA SFGPA+V   W  HWVYWVGP+ GG LAGI+Y   F
Sbjct:   79 VTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVALDGVAGGDLGVSSFDPSLNCAQAVLIEALITFILVFVVKAVS-DPGRQDIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVVQGVWTYHWVYWVGPIAGGLLAGIIYRLIF 231          
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24
Identity = 59/154 (38.31%), Postives = 88/154 (57.14%), Query Frame = -1
Query:  246 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 698
            VT G  +  +IS+L+G  Y ++Q +G+     L+K  T         ++     + A   V+ E ++TF LV+ V+    D ++  +   AP+AIG  + A  L+   + GASMNPA SFGPA+V  +W + WVYWVGP++GG LAG VY  FF
Sbjct:   85 VTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVC-DNRRSDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGNWTDQWVYWVGPIVGGILAGAVYRLFF 237          
BLAST of DN621398 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 2.965e-24
Identity = 62/160 (38.75%), Postives = 94/160 (58.75%), Query Frame = -1
Query:  228 VTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN---GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 698
            VT G  +   IS+LR ++Y IAQ +G+ VA  +L  +T+   G +    +L+ GV +   +  EI+ T  LV  V AT  D ++  LG  AP+AIGF V    L    + G  +NPA SFG A+++ ++ +HWV+WVGP IGG LA ++Y+F    +S +
Sbjct:   81 VTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVITHNFQDHWVFWVGPFIGGALAVLIYDFILAPRSSD 239          
The following BLAST results are available for this feature:
BLAST of DN621398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 161
Match NameE-valueIdentityDescription
MIP_RANPI4.138e-2642.76Lens fiber major intrinsic protein OS=Rana pipiens... [more]
MIP_CAVPO4.138e-2642.11Lens fiber major intrinsic protein OS=Cavia porcel... [more]
MIP_CANFA4.138e-2642.11Lens fiber major intrinsic protein OS=Canis famili... [more]
MIP_HUMAN7.058e-2641.45Lens fiber major intrinsic protein OS=Homo sapiens... [more]
MIP_RAT9.218e-2641.45Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_MOUSE9.218e-2641.45Lens fiber major intrinsic protein OS=Mus musculus... [more]
TIP51_MAIZE3.503e-2540.13Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1[more]
AQP_DROME5.975e-2540.26Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
AQP_AEDAE1.331e-2438.31Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP1_PIG2.965e-2438.75Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06K13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621398 ID=DN621398; Name=DN621398; organism=Citrus sinensis; type=EST; length=698bp
TTTTTTTTTTTTTTTTTGAAAGACAAAGCCATAGCCTCGGGACTCCATAA
TTATCGCGATACAATAATCCAGCAGCTCATGACGATGGAAACAGATCAAC
GGCCATAAATTAAACACAAATTAAAAATAAAAAGAAAGAACCTCGGTAAA
AGCAAATTAAATACAACATCCGTGCAAACTCACATAGATGGCAAGCTTTT
AGCTTAGTACTCGGTTGTTGGGAGCTGCTCATGCGACTGGTTAATGAAGA
AGAACTCGTAGACGATGCCAGCTAGCCCACCACCGATGAGTGGCCCGACC
CAGTAGACCCAGTGGTTGTCCCAGCTCCAGCTCACCAAAGCTGGCCCGAA
TGACACTGCTGGGTTCATTGAAGCTCCATCAAACGCCCCGCCCGCCAAGA
TGTTGGCTCCTACAATGAAACCAATTGCAATTGGTGCAATTGTCCCCAAG
CTTCCCTTCTTTGGGTCCAGGGCTGTGGCATACACTGTGTACACTAGTCC
GAATGTCATCACGATCTCGAAAACGACTGCGTTCCATGCACCAACTCCAG
ATGAGAGAGCAAAAGCAGATGTGGTCTGGCCGTTGGTAACGAACTTAAGA
AGCAAGCATGCGACGGTGGATCCAAGAAGCTGGGCGATCCAGTAGAGGAT
GCCACGTAGAAGGGAGATGTTACCTCCAACGAAGGCGCCAAAGGTGAC
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