DN621393

Overview
NameDN621393
Unique NameDN621393
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.314e-16
Identity = 36/91 (39.56%), Postives = 57/91 (62.64%), Query Frame = -2
Query:  424 GFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDIG 696
            G+  +++ V E GW ++ +  +    V  AR +N  + +  +  KGTPL P    + Y+F++F+ENQKPGP +ER+FGLF PD +  YD+G
Sbjct:  255 GYGDVDIAVGEAGWPTQAEPGQIGVGVQEARDFNEGMIRVCSSGKGTPLMPNRTFETYLFSLFDENQKPGPIAERHFGLFNPDFTPVYDLG 345          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13I_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-N (Fragment) OS=Nicotiana tabacum GN=PRN PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16
Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = -2
Query:  427 AGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 699
            AG + +E+IV+E+GW S G+S   AAT++NA+TY  NL   +    GTP +P   ++ Y+FA+F+EN K G  +E++FGLF PD    Y +
Sbjct:  185 AGGQNVEIIVSESGWPSEGNS---AATIENAQTYYENLINHVKSGAGTPKKPGKAIETYLFAMFDENNKEGDITEKHFGLFSPDQRAKYQL 272          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13G_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 OS=Nicotiana tabacum GN=PR2 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16
Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = -2
Query:  427 AGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 699
            AG + +E+IV+E+GW S G+S   AAT++NA+TY  NL   +    GTP +P   ++ Y+FA+F+EN K G  +E++FGLF PD    Y +
Sbjct:  253 AGGQNVEIIVSESGWPSEGNS---AATIENAQTYYENLINHVKSGAGTPKKPGKAIETYLFAMFDENNKEGDITEKHFGLFSPDQRAKYQL 340          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13J_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-O (Fragment) OS=Nicotiana tabacum GN=PR0 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.947e-16
Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = -2
Query:  427 AGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 699
            AG   +E+IV+E+GW S G+S   AAT++NA+TY  NL   + +  GTP +P   ++ Y+FA+F+EN K G  +E++FGLF PD    Y +
Sbjct:   70 AGGPNVEIIVSESGWPSEGNS---AATIENAQTYYRNLIDHVKRGAGTPKKPGKTIETYLFAMFDENDKKGEITEKHFGLFSPDQRAKYQL 157          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13C_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41A PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16
Identity = 40/91 (43.96%), Postives = 62/91 (68.13%), Query Frame = -2
Query:  427 AGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 699
            AG   +E+IV+E+GW S G+S   AAT++NA+TY  NL   +    GTP +P  +V+ Y+FA+F+EN+K G  +E++FGLF P+ +  Y +
Sbjct:  257 AGGPNVEIIVSESGWPSEGNS---AATIENAQTYYRNLVNHVKGGAGTPKKPGRIVETYLFAMFDENEKNGEVTEKHFGLFYPNRTAKYQL 344          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13D_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41B PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 39/91 (42.86%), Postives = 62/91 (68.13%), Query Frame = -2
Query:  427 AGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 699
            AG   +E+IV+E+GW S G+S   AAT++NA+TY  NL   +    GTP +P  +++ Y+FA+F+EN+K G  +E++FGLF P+ +  Y +
Sbjct:  257 AGGPNVEIIVSESGWPSEGNS---AATIENAQTYYRNLVNHVKGGAGTPKKPGRIIETYLFAMFDENEKQGEITEKHFGLFYPNRAAKYQL 344          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13L_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL153 OS=Nicotiana tabacum GN=GGL4 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.148e-15
Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = -2
Query:  427 AGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 699
            AG   +E+IV+E+GW S G+S   AAT++NA+TY  NL   + +  GTP +P   ++ Y+FA+F+EN K G  +E++FGLF PD    Y +
Sbjct:  253 AGGPNVEIIVSESGWPSEGNS---AATIENAQTYYRNLIDHVKRGAGTPKKPGKSIETYLFAMFDENVKKGEITEKHFGLFSPDQRAKYQL 340          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13K_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL161 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.148e-15
Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = -2
Query:  427 AGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 699
            AG   +E+IV+E+GW S G S   AAT++NA+TY  NL   +    GTP +P   ++ Y+FA+F+EN K G  +E++FGLF PD    Y +
Sbjct:  233 AGGPNVEIIVSESGWPSEGSS---AATIENAQTYYRNLINHVKSGAGTPKKPGKTIETYLFAMFDENDKIGEITEKHFGLFSPDQRAKYQL 320          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = -2
Query:  433 VIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAY 678
            V+VTE+GW S+GDS E  AT+DNA TYN NL K +  + GTPL P+     Y++ +FNE+ +  P SE ++GLF  + +  Y
Sbjct:  171 VLVTESGWPSKGDSKEPYATIDNADTYNSNLIKHVFDRTGTPLHPEMTSSVYIYELFNEDLRAPPVSEASWGLFYGNSTPVY 252          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13B_MAIZE (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Zea mays PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 45/92 (48.91%), Postives = 59/92 (64.13%), Query Frame = -2
Query:  427 DAGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 702
            +AG   + V+V+E+GW S G     AAT  NA+TYN NL   + +  GTP RP   ++ Y+FA+FNE+QK G  SER+FGLF PD S  Y I
Sbjct:  247 NAGAGNVPVVVSESGWPSAGGD---AATAANAQTYNQNLINHVGQ--GTPKRP-GPIETYIFAMFNEDQKTGAESERHFGLFNPDKSPVYPI 332          
The following BLAST results are available for this feature:
BLAST of DN621393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
E13B_WHEAT2.314e-1639.56Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E13I_TOBAC3.022e-1643.96Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13G_TOBAC3.022e-1643.96Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13J_TOBAC3.947e-1643.96Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13C_TOBAC6.733e-1643.96Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]
E13D_TOBAC8.793e-1642.86Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]
E13L_TOBAC1.148e-1543.96Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13K_TOBAC1.148e-1543.96Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E131_ARATH1.500e-1546.34Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E13B_MAIZE5.699e-1548.91Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06K10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621393 ID=DN621393; Name=DN621393; organism=Citrus sinensis; type=EST; length=703bp
CCCCCNGGGCTGCAGGTTTTTTTTTAAATCTGTAGATGGAATCTCGAATT
TTCCTCCTTGGTTCTTTTGACATGAACTCACTAGGAGAACACGTTTAACC
AGGCAAAAATCAATTTACATTTGCTGATACAGATAAAATAATCAGCAATC
CTAGCTTATGTTTTTAAATGAAAATACAAGAATTTAGGTATATAGTTTCA
ACTATTGAGCATGTTGTGAAATGCACCAAACTCAGAACCCTTTGACTTGC
GTGTGCTGGTTTGGCAATTAAAATATATGACTGCCCTGAGACATGCTCAA
TCACTAGCTTAAGAACAACCATTGCCACAGCAAGATTATTAAAATCAAGG
AACAATCTCGAGCTCGAATATCCTTAAAAGACAGATGTGATGAACCAGCA
GATGAAGACTTCAGTCCATGAAATCCAATGTCATATGCAATGCTCCCATC
AGGCTTAAACAGTCCAAAATTCCTCTCAGAAGTCGGTCCAGGTTTCTGAT
TCTCATTAAAAATAGCAAAAACATAAGCCTTCACCACATTTTTCGGCCGA
AGAGGAGTTCCTTTCTTCTTAGCAAGCCTTTTCCGCAGATTATAATTGTA
TGTCCTTGCATTGTCAACCGTTGCAGCAGCTTCATTGCTATCTCCACGGG
AGGCCCATCCTGTCTCTGTGACTATGACTTCCATCTTTTTAAATCCAGCA
TCC
back to top