DN621393

Overview
NameDN621393
Unique NameDN621393
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13A_SOLLC (Glucan endo-1,3-beta-glucosidase A OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.722e-15
Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = -2
Query:  427 GFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 696
            G + +E+IV+E+GW S G     +AT++NA TY  NL   +    GTP +P   ++ Y+FA+F+EN+K G  SE++FGLFKPD    Y +
Sbjct:  247 GGQNIEIIVSESGWPSEG---HPSATLENAMTYYTNLINHVKGGAGTPKKPGRTIETYLFAMFDENRKDGKPSEQHFGLFKPDQRPKYQL 333          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13B_HORVU (Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = -2
Query:  427 AGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 699
            AG   ++V+V+E+GW S G     AA+  NARTYN  L   +    GTP + +  ++ Y+FA+FNENQK G  +ER+FGLF PD S AY+I
Sbjct:  248 AGAPAVKVVVSESGWPSAGGF---AASAGNARTYNQGLINHVGG--GTP-KKREALETYIFAMFNENQKTGDATERSFGLFNPDKSPAYNI 332          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13D_HORVU (Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 45/91 (49.45%), Postives = 59/91 (64.84%), Query Frame = -2
Query:  427 AGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 699
            AG   + V+V+E+GW S G     AAT +NAR YN  L   +A   GTP +P ++ +AYVFA+FNENQKPG  +ER+FGLF P+    Y I
Sbjct:  222 AGAPSVRVVVSESGWPSAGGF---AATPENARAYNQGLIDHVAH--GTPKKPGHM-EAYVFAMFNENQKPGLETERHFGLFYPNKRPVYHI 306          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13B_VITVI (Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera GN=GSVIVT00022223001 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13
Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = -2
Query:  427 AGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 699
            AG   ++++V+E+GW S G +   AATVDNARTY  NL   +  K GTP R    ++ Y+FA+F+ENQK G  +E++FGLF P     Y I
Sbjct:  199 AGGSNLKIVVSESGWPSEGGT---AATVDNARTYYKNLINHV--KGGTP-RKSGAIETYLFAMFDENQKTGLETEKHFGLFTPSQESKYQI 283          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13E_HORVU (Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.404e-13
Identity = 41/89 (46.07%), Postives = 55/89 (61.80%), Query Frame = -2
Query:  433 AGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAY 699
            AG   + V+V+E+GW S G      A+V+NAR YN  L   +  + GTP RP   ++ Y+FA+FNEN+KPG   ERNFGLF P+    Y
Sbjct:  228 AGTPNVRVVVSESGWPSAGGFG---ASVENARNYNQGLIDHI--RSGTPKRP-GAIETYIFAMFNENRKPGDEVERNFGLFFPNKQPVY 310          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13F_HORVU (Putative glucan endo-1,3-beta-glucosidase GVI (Fragment) OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.395e-13
Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = -2
Query:  427 GFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 696
            G + +E++V+ETGW S G      A+V+NA  Y  NL + +    GTP RP   V+ Y+FA+FNENQKP    E+NFG+F+PD S  Y +
Sbjct:  231 GGESLELVVSETGWPSGGGGY--GASVENAAAYINNLVRHVG---GTPRRPGKAVETYIFAMFNENQKPEGV-EQNFGMFQPDMSQVYHV 314          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13A_HORVU (Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vulgare PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13
Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = -2
Query:  427 AGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 699
            +G   + V+V+E+GW S   ++  AAT DNAR YN  L   +    GTP RP   ++ Y+FA+FNEN K G  +E++FGLF PD S AY I
Sbjct:  223 SGAPGVRVVVSESGWPS---ASGFAATADNARAYNQGLIDHVGG--GTPKRP-GALETYIFAMFNENFKTGELTEKHFGLFNPDKSPAYPI 307          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 2.648e-12
Identity = 39/91 (42.86%), Postives = 58/91 (63.74%), Query Frame = -2
Query:  427 AGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDI 699
            AG   +E++V+E+GW S G     AAT +NA TY  NL + +  K+G+P RP  V++ Y+FA+F+EN K  P  E++FGLF P+    Y +
Sbjct:  260 AGGGSIEIVVSESGWPSAG---AFAATTNNAATYYKNLIQHV--KRGSPRRPNKVIETYLFAMFDENNK-NPELEKHFGLFSPNKQPKYPL 344          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13B_PHAVU (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.458e-12
Identity = 40/87 (45.98%), Postives = 53/87 (60.92%), Query Frame = -2
Query:  424 MEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKPDGSIAYDIG 684
            +EV+V+E+GW S G      AT DNAR Y  NL +R  +  G+P RP    + Y+FA+F+ENQK  P  E++FGLFKP     Y  G
Sbjct:  234 VEVVVSESGWPSDGGFG---ATYDNARVYLDNLVRRAGR--GSPRRPSKPTETYIFAMFDENQK-SPEIEKHFGLFKPSKEKKYPFG 314          
BLAST of DN621393 vs. ExPASy Swiss-Prot
Match: E13A_SOYBN (Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12
Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = -2
Query:  451 AGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTSERNFGLFKP 699
            AG   + ++V+E+GW S G +   A ++DNARTYN NL + +  K+GTP RP   ++ YVFA+F+ENQK  P  E+ +GLF P
Sbjct:  259 AGGGSLNIVVSESGWPSSGGT---ATSLDNARTYNTNLVRNV--KQGTPKRPGAPLETYVFAMFDENQKQ-PEFEKFWGLFSP 335          
The following BLAST results are available for this feature:
BLAST of DN621393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
E13A_SOLLC9.722e-1543.33Glucan endo-1,3-beta-glucosidase A OS=Solanum lyco... [more]
E13B_HORVU3.694e-1447.25Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vu... [more]
E13D_HORVU4.825e-1449.45Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vu... [more]
E13B_VITVI1.075e-1346.15Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera... [more]
E13E_HORVU1.404e-1346.07Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vul... [more]
E13F_HORVU2.395e-1345.56Putative glucan endo-1,3-beta-glucosidase GVI (Fra... [more]
E13A_HORVU6.967e-1346.15Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vul... [more]
GUB_NICPL2.648e-1242.86Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2... [more]
E13B_PHAVU3.458e-1245.98Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
E13A_SOYBN4.516e-1246.99Glucan endo-1,3-beta-glucosidase OS=Glycine max PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06K10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621393 ID=DN621393; Name=DN621393; organism=Citrus sinensis; type=EST; length=703bp
CCCCCNGGGCTGCAGGTTTTTTTTTAAATCTGTAGATGGAATCTCGAATT
TTCCTCCTTGGTTCTTTTGACATGAACTCACTAGGAGAACACGTTTAACC
AGGCAAAAATCAATTTACATTTGCTGATACAGATAAAATAATCAGCAATC
CTAGCTTATGTTTTTAAATGAAAATACAAGAATTTAGGTATATAGTTTCA
ACTATTGAGCATGTTGTGAAATGCACCAAACTCAGAACCCTTTGACTTGC
GTGTGCTGGTTTGGCAATTAAAATATATGACTGCCCTGAGACATGCTCAA
TCACTAGCTTAAGAACAACCATTGCCACAGCAAGATTATTAAAATCAAGG
AACAATCTCGAGCTCGAATATCCTTAAAAGACAGATGTGATGAACCAGCA
GATGAAGACTTCAGTCCATGAAATCCAATGTCATATGCAATGCTCCCATC
AGGCTTAAACAGTCCAAAATTCCTCTCAGAAGTCGGTCCAGGTTTCTGAT
TCTCATTAAAAATAGCAAAAACATAAGCCTTCACCACATTTTTCGGCCGA
AGAGGAGTTCCTTTCTTCTTAGCAAGCCTTTTCCGCAGATTATAATTGTA
TGTCCTTGCATTGTCAACCGTTGCAGCAGCTTCATTGCTATCTCCACGGG
AGGCCCATCCTGTCTCTGTGACTATGACTTCCATCTTTTTAAATCCAGCA
TCC
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