DN621392
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=WAXY PE=3 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 3.408e-48 Identity = 93/141 (65.96%), Postives = 108/141 (76.60%), Query Frame = -1 Query: 231 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 653 H+I+AGAD + +PSRFEPCG+IQL MRYGT ASTGGLVDTV EG TGF MG SVDC+ V+P DV V+ T++RA+ GT A EM++N M QDLSWKGPAK WE LL L VAGS PGI+G+EIAPLAKENVA P Sbjct: 469 HLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKENVAAP 609
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: SSG1_MAIZE (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea mays GN=WAXY PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.813e-48 Identity = 92/141 (65.25%), Postives = 107/141 (75.89%), Query Frame = -1 Query: 231 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 653 H I+AGAD + + SRFEPCG+IQL MRYGT ASTGGLVDT+ EG TGF MG SVDC V+P DV V+TT++RA+ GT A EM++N M QDLSWKGPAK WE LL+L VAG EPG++GEEIAPLAKENVA P Sbjct: 465 HHIMAGADVLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVDTIIEGKTGFHMGRLSVDCNVVEPADVKKVATTLQRAIKVVGTPAYEEMVRNCMIQDLSWKGPAKNWENVLLSLGVAGGEPGVEGEEIAPLAKENVAAP 605
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: SSG1_HORVU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 9.915e-48 Identity = 92/141 (65.25%), Postives = 106/141 (75.18%), Query Frame = -1 Query: 231 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 653 H ++AGAD + + SRFEPCG+IQL MRYGT + ASTGGLVDT+ EG TGF MG SVDC V+P DV V+TT++RA+ GT A EM+KN M QDLSWKGPAK WE+ LL L V GSEPGI GEEIAPLA ENVA P Sbjct: 463 HQMMAGADLLAVTSRFEPCGLIQLQGMRYGTPCVCASTGGLVDTIVEGKTGFHMGRLSVDCNVVEPADVKKVATTLKRAVKVVGTPAYQEMVKNCMIQDLSWKGPAKNWEDVLLELGVEGSEPGIVGEEIAPLAMENVAAP 603
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: SSG1_ORYGL (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza glaberrima GN=WAXY PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.295e-47 Identity = 92/141 (65.25%), Postives = 108/141 (76.60%), Query Frame = -1 Query: 231 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 653 H+I+AGAD + +PSRFEPCG+IQL MRYGT ASTGGLVDTV EG TGF MG SV+C+ V+P DV V+ T++RA+ GT A EM++N M QDLSWKGPAK WE LL L VAGS PGI+G+EIAPLAKENVA P Sbjct: 469 HLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVNCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKENVAAP 609
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: SSG1_WHEAT (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WAXY PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.432e-46 Identity = 92/141 (65.25%), Postives = 104/141 (73.76%), Query Frame = -1 Query: 231 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 653 H ++AGAD + + SRFEPCG+IQL MRYGT ASTGGLVDT+ EG TGF MG SVDC V+P DV V TT++RA+ GT A EM+KN M QDLSWKGPAK WE+ LL L V GSEPGI GEEIAPLA ENVA P Sbjct: 475 HQMMAGADVLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVDTIVEGKTGFHMGRLSVDCNVVEPADVKKVVTTLKRAVKVVGTPAYHEMVKNCMIQDLSWKGPAKNWEDVLLELGVEGSEPGIVGEEIAPLALENVAAP 615
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_MYXXD (Glycogen synthase OS=Myxococcus xanthus (strain DK 1622) GN=glgA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.545e-19 Identity = 49/111 (44.14%), Postives = 70/111 (63.06%), Query Frame = -1 Query: 324 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWE 653 H++ AGADF L+PSR+EPCG+ Q++++RYGTVPIV +TGGLVDTVE G G + + +A+ +RRALA Y + L E + GM +D SW +++E Sbjct: 366 HLVEAGADFFLMPSRYEPCGLNQMYSLRYGTVPIVRATGGLVDTVEGGLDGNGI--------LFEAFHKSALLAAIRRALALYADPSRLDEFRRRGMEKDFSWGASGRRYE 468
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_THEYD (Glycogen synthase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=glgA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.670e-19 Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = -1 Query: 321 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-QALAEMMKNGMAQDLSWKGPAKKWEE 653 H I AGAD +L+PSR+EPCG+ QL AMRYGT+PI TGGL DTVE+ TGF +S +A++ + R + Y Q EM++ M +D SW +KK+ E Sbjct: 380 HKIYAGADSLLVPSRYEPCGLSQLIAMRYGTIPICRKTGGLSDTVEDKVTGFLFSEYS----------SSALTHAISRFIEIYNNKQKFLEMIREAMKRDFSWSNSSKKYIE 481
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_POLNA (Glycogen synthase OS=Polaromonas naphthalenivorans (strain CJ2) GN=glgA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.069e-17 Identity = 51/119 (42.86%), Postives = 69/119 (57.98%), Query Frame = -1 Query: 327 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTV---------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 653 H I+AGAD +L+PSRFEPCG+ QL+A+RYGTVP+V GGL DTV + TGF G P AA++ + +A+A +G AL +M GMAQ+ SW A ++ Sbjct: 369 HRIMAGADAMLVPSRFEPCGLTQLYALRYGTVPVVRHVGGLADTVVGASEASVQADRATGFMFG----------PATPAALAQALLQAVAAHGQPALWHRLMLRGMAQNFSWTAAASQY 477
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_ANADE (Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=glgA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.069e-17 Identity = 51/111 (45.95%), Postives = 70/111 (63.06%), Query Frame = -1 Query: 324 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 653 H I AGAD L+PSRFEPCG+ Q++++RYGTVP+V S GGL DTVE+ F GF G+ E A+ T RRAL + +A +++ GMA+D SW+ A ++E Sbjct: 362 HRIEAGADLFLMPSRFEPCGLNQMYSLRYGTVPVVRSVGGLADTVED-FDGFARGTGFRFAEYTP----QALLTATRRALDVFRDRRAWRGLVERGMAEDNSWERSAARYE 467
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_ACIBL (Glycogen synthase OS=Acidobacteria bacterium (strain Ellin345) GN=glgA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.396e-17 Identity = 50/112 (44.64%), Postives = 72/112 (64.29%), Query Frame = -1 Query: 327 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKW 653 H I AG+D L+PSR+EPCG+ Q++++RYGTVPIV +TGGL DT+E + T G V+ D +D TVR+AL + + A ++M+NGMA+D SW AK++ Sbjct: 363 HKIEAGSDMFLMPSRYEPCGLNQIYSLRYGTVPIVRATGGLDDTIENWDPITNRGTGFKFVEYSGEDMLD------TVRKALELFKDKTAWQKLMRNGMARDFSWNTAAKEY 468 The following BLAST results are available for this feature:
BLAST of DN621392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621392 ID=DN621392; Name=DN621392; organism=Citrus sinensis; type=EST; length=653bpback to top |