DN621392

Overview
NameDN621392
Unique NameDN621392
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length653
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_ECOSE (Glycogen synthase OS=Escherichia coli (strain SE11) GN=glgA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.445e-14
Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = -1 
Query:  303 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 653
            H I+ GAD IL+PSRFEPCG+ QL+ ++YGT+P+V  TGGL DTV     E    G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  361 HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_ECOLU (Glycogen synthase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.445e-14
Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = -1 
Query:  303 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 653
            H I+ GAD IL+PSRFEPCG+ QL+ ++YGT+P+V  TGGL DTV     E    G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  361 HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_ECOLI (Glycogen synthase OS=Escherichia coli (strain K12) GN=glgA PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.445e-14
Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = -1 
Query:  303 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 653
            H I+ GAD IL+PSRFEPCG+ QL+ ++YGT+P+V  TGGL DTV     E    G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  361 HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_ECOLC (Glycogen synthase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=glgA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.445e-14
Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = -1 
Query:  303 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 653
            H I+ GAD IL+PSRFEPCG+ QL+ ++YGT+P+V  TGGL DTV     E    G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  361 HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_ECOL6 (Glycogen synthase OS=Escherichia coli O6 GN=glgA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.445e-14
Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = -1 
Query:  303 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 653
            H I+ GAD IL+PSRFEPCG+ QL+ ++YGT+P+V  TGGL DTV     E    G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  361 HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_ECOL5 (Glycogen synthase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.445e-14
Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = -1 
Query:  303 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 653
            H I+ GAD IL+PSRFEPCG+ QL+ ++YGT+P+V  TGGL DTV     E    G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  361 HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_ECOK1 (Glycogen synthase OS=Escherichia coli O1:K1 / APEC GN=glgA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.445e-14
Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = -1 
Query:  303 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 653
            H I+ GAD IL+PSRFEPCG+ QL+ ++YGT+P+V  TGGL DTV     E    G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  361 HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_ECOHS (Glycogen synthase OS=Escherichia coli O9:H4 (strain HS) GN=glgA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.445e-14
Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = -1 
Query:  303 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 653
            H I+ GAD IL+PSRFEPCG+ QL+ ++YGT+P+V  TGGL DTV     E    G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  361 HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_ECODH (Glycogen synthase OS=Escherichia coli (strain K12 / DH10B) GN=glgA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.445e-14
Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = -1 
Query:  303 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 653
            H I+ GAD IL+PSRFEPCG+ QL+ ++YGT+P+V  TGGL DTV     E    G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  361 HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_ECOBW (Glycogen synthase OS=Escherichia coli (strain K12 / BW2952) GN=glgA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.445e-14
Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = -1 
Query:  303 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 653
            H I+ GAD IL+PSRFEPCG+ QL+ ++YGT+P+V  TGGL DTV     E    G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  361 HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
The following BLAST results are available for this feature:
BLAST of DN621392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 318
Match NameE-valueIdentityDescription
GLGA_ECOSE1.445e-1438.21Glycogen synthase OS=Escherichia coli (strain SE11... [more]
GLGA_ECOLU1.445e-1438.21Glycogen synthase OS=Escherichia coli O17:K52:H18 ... [more]
GLGA_ECOLI1.445e-1438.21Glycogen synthase OS=Escherichia coli (strain K12)... [more]
GLGA_ECOLC1.445e-1438.21Glycogen synthase OS=Escherichia coli (strain ATCC... [more]
GLGA_ECOL61.445e-1438.21Glycogen synthase OS=Escherichia coli O6 GN=glgA P... [more]
GLGA_ECOL51.445e-1438.21Glycogen synthase OS=Escherichia coli O6:K15:H31 (... [more]
GLGA_ECOK11.445e-1438.21Glycogen synthase OS=Escherichia coli O1:K1 / APEC... [more]
GLGA_ECOHS1.445e-1438.21Glycogen synthase OS=Escherichia coli O9:H4 (strai... [more]
GLGA_ECODH1.445e-1438.21Glycogen synthase OS=Escherichia coli (strain K12 ... [more]
GLGA_ECOBW1.445e-1438.21Glycogen synthase OS=Escherichia coli (strain K12 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06K10_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006K10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621392 ID=DN621392; Name=DN621392; organism=Citrus sinensis; type=EST; length=653bp
AGAGTGGCGACAGCCCTCAGAGCCCTTTTACAAAACTGTAAAACAGAACT
TAATATTTCATTATACAAGGTAAACACTAATGTCTCAACTCCAAACCATT
ATTGAAAATAGCGCATGCTGCATATACTGCCAACCTATGTTATTTCCTAA
GTAATATCTTGGGTTGTGGAGAATTACAGGAACATGTTTGCGGTCCAAAA
TAAAAGTGGAGATTTTTGTAGCCTCGATCAAGGAGTGGCCACATTTTCCT
TGGCAAGAGGAGCAATTTCTTCGCCGTCAATTCCAGGTTCACTACCAGCA
ACTTCCAGGTTAAGTAGGGTCTCCTCCCATTTCTTAGCTGGTCCTTTCCA
TGAAAGATCTTGAGCCATGCCATTTTTCATCATTTCAGCCAAAGCTTGAG
TACCATAGGTTGCAAGAGCTCTTCTGACGGTTGTGGACACTGCAGCCACA
TCTACTGGATCCACAGCCTCACAGTCAACACTGAAGCTTCCCATCTGGAA
TCCTGTAAAGCCTTCTTCCACAGTGTCAACCAAACCACCAGTGGAAGCCA
CGATAGGTACGGTTCCATAACGCATGGCATGTAATTGAATGATACCACAA
GGTTCAAATCTGCTTGGAATCAAAATAAAATCAGCTCCTGCTATTATCAT
ATG
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