DN621392
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_RHIEC (Glycogen synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=glgA PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 9.051e-17 Identity = 46/110 (41.82%), Postives = 66/110 (60.00%), Query Frame = -1 Query: 327 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 653 H++ AG D I+IPSRFEPCG+ QL+A+RYG VPIVA TGGL DTV + + + PV + +RRA+ Y + L ++ K GM D+SW+ A+++ Sbjct: 360 HLMQAGCDAIIIPSRFEPCGLTQLYALRYGCVPIVARTGGLNDTVIDANHAALAAKVATGIQ-FSPVTETGMLQAIRRAMHFYADRKLWTQLQKQGMKSDVSWEKSAERY 468
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_ANASK (Glycogen synthase OS=Anaeromyxobacter sp. (strain K) GN=glgA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.544e-16 Identity = 48/116 (41.38%), Postives = 70/116 (60.34%), Query Frame = -1 Query: 324 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEE-----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 653 H I AGAD L+PSRFEPCG+ Q++++RYGTVP+V + GGL DTVE+ TGF+ ++ A+ T RRAL + +A +++ GMA+D SW+ A ++E Sbjct: 362 HRIEAGADLFLMPSRFEPCGLNQMYSLRYGTVPVVRAVGGLADTVEDFDGVARGTGFRFSEYTPQ----------ALLTATRRALDVFRDRRAWRGLVERGMAEDNSWERSAARYE 467
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: SSY1_WHEAT (Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WSSI-2 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.016e-16 Identity = 48/113 (42.48%), Postives = 68/113 (60.18%), Query Frame = -1 Query: 321 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ--ALAEMMKNGMAQDLSWKGPAKKWEE 653 H I AG D +L+PSRFEPCG+ QL+AM+YGTVP+V TGGL DTVE F F A P+ V + +R A++T+ + +MK GM +D +W A+++E+ Sbjct: 523 HRITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTVET-FNPFGAKGEEGTGWAFSPLTVDKMLWALRTAMSTFREHKPSWEGLMKRGMTKDHTWDHAAEQYEQ 634
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_RHILW (Glycogen synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=glgA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.633e-16 Identity = 45/110 (40.91%), Postives = 65/110 (59.09%), Query Frame = -1 Query: 327 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 653 H++ AG D I+IPSRFEPCG+ QL+ +RYG VPIVA TGGL DTV + + + PV + +RRA+ Y + L ++ K GM D+SW+ A+++ Sbjct: 360 HLMQAGCDAIIIPSRFEPCGLTQLYGLRYGCVPIVARTGGLNDTVIDANHAALAAKVATGIQ-FSPVTETGMLQAIRRAMHFYADRKLWTQLQKQGMKSDVSWEKSAERY 468
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_RHIE6 (Glycogen synthase OS=Rhizobium etli (strain CIAT 652) GN=glgA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.633e-16 Identity = 45/110 (40.91%), Postives = 65/110 (59.09%), Query Frame = -1 Query: 327 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 653 H++ AG D I+IPSRFEPCG+ QL+ +RYG VPIVA TGGL DTV + + + PV + +RRA+ Y + L ++ K GM D+SW+ A+++ Sbjct: 360 HLMQAGCDAIIIPSRFEPCGLTQLYGLRYGCVPIVARTGGLNDTVIDANHAALAAKVATGIQ-FSPVTETGLLQAIRRAMHFYADRKLWTQLQKQGMKSDVSWEKSAERY 468
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: SSY3_SOLTU (Soluble starch synthase 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS3 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.439e-16 Identity = 49/116 (42.24%), Postives = 63/116 (54.31%), Query Frame = -1 Query: 321 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDT---VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 653 H+I AGADFIL+PS FEPCG+ QL AMRYG++P+V TGGL DT V+ Q + + D D V + RAL+ + G + K M QD SW PA + E Sbjct: 1106 HLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQQCGLEPNGFSFDGADAGGVDYALNRALSAWYDGRDWFNSLCKQVMEQDWSWNRPALDYLE 1221
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: SSY21_ORYSJ (Soluble starch synthase 2-1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-1 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.439e-16 Identity = 51/116 (43.97%), Postives = 64/116 (55.17%), Query Frame = -1 Query: 312 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 653 H + AGAD +L+PSRFEPCG+ QL+AM YGTVP+V + GGL DTVE + +G EA +D R T + + K GM QDLSW AK +EE LL Sbjct: 632 HRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRT----SWEGLQKRGMMQDLSWDNAAKLYEEVLL 743
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA1_RHIME (Glycogen synthase 1 OS=Rhizobium meliloti GN=glgA1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.439e-16 Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = -1 Query: 327 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEA---VDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 653 H++ AGAD ILIPSRFEPCG+ QL+ +RYG VP+VA TGGL DT+ + + S C PV + +RR L Y L A + GM D+SW A+++ Sbjct: 361 HLMQAGADAILIPSRFEPCGLTQLYGLRYGCVPVVARTGGLTDTIIDA----NEAALSAKCATGFHFLPVTTDGLRLAIRRVLRAYNEPKLWARLQYQGMKSDVSWAKSAERY 469
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPS (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=glgA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.867e-16 Identity = 50/116 (43.10%), Postives = 64/116 (55.17%), Query Frame = -1 Query: 327 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMG-SFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 653 H I AGAD +L+PSRFEPCG+ QL A+RYG VP+VA GGL DTV + TG G FS PV ++ + + A Y A + NGM D+SWK PA+ + Sbjct: 364 HQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFS-------PVTADMLTAALTKTRALYADHATWRNLQINGMTTDVSWKNPAQHY 472
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_RHIL3 (Glycogen synthase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=glgA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.867e-16 Identity = 45/110 (40.91%), Postives = 65/110 (59.09%), Query Frame = -1 Query: 327 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 653 H++ AG D I+IPSRFEPCG+ QL+ +RYG VPIVA TGGL DTV + + + PV + +RRA+ Y + L ++ K GM D+SW+ A+++ Sbjct: 360 HLMQAGCDAIIIPSRFEPCGLTQLYGLRYGCVPIVARTGGLNDTVIDANHAALAAKVATGIQFA-PVTETGMLQAIRRAMHFYQDRKLWTQLQKQGMKSDVSWEKSAERY 468 The following BLAST results are available for this feature:
BLAST of DN621392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621392 ID=DN621392; Name=DN621392; organism=Citrus sinensis; type=EST; length=653bpback to top |