DN621392
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPA (Glycogen synthase OS=Rhodopseudomonas palustris GN=glgA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.487e-15 Identity = 48/119 (40.34%), Postives = 66/119 (55.46%), Query Frame = -1 Query: 306 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD--PVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 653 H I AGAD +L+PSRFEPCG+ QL A+RYG VP+VA GGL DTV + +M + + V PV A+ + A + A + NGM D+SWK PA+ + + +L Sbjct: 364 HQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVD---ANEMATATGVATGVQFAPVTTDALIKAFGKTRALFADVVAWRNLQINGMTTDVSWKNPAQHYAKLYRDL 479
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_PROM1 (Glycogen synthase OS=Prochlorococcus marinus (strain NATL1A) GN=glgA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.487e-15 Identity = 57/142 (40.14%), Postives = 75/142 (52.82%), Query Frame = -1 Query: 231 MIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 650 +I GAD L+PSRFEPCGI QL AMRYG +PIV GGLVDTVE + GS F D +P+D ++ VR A ++ E+ M+ SW AK++E L+ +V G EP D E+ + A P Sbjct: 343 LIYGGADAFLMPSRFEPCGISQLLAMRYGAIPIVRKVGGLVDTVEPYNPMNETGSGFCFD--RYEPIDF--YTSLVRSWEAYRHQKSWKELQLRAMSNKYSWDRSAKEYE--LMYKDVCGIKEPSPDAAEVEKFSYGQEADP 478
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: SSY2_SOLTU (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS2 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 8.472e-15 Identity = 48/128 (37.50%), Postives = 65/128 (50.78%), Query Frame = -1 Query: 312 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE--------------MMKNGMAQDLSWKGPAKKWEETLL 653 H I AGAD +L+PSRFEPCG+ QL+AM+YGT+P+V + GGL DTV + DP + + + T RA A+ AL + M QDLSW A+ +EE L+ Sbjct: 650 HRITAGADILLMPSRFEPCGLNQLYAMKYGTIPVVHAVGGLRDTV----------------QPFDPFNESGLGWTFSRAEASQLIHALGNCLLTYREYKKSWEGIQTRCMTQDLSWDNAAQNYEEVLI 761
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_XANCP (Glycogen synthase OS=Xanthomonas campestris pv. campestris GN=glgA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.472e-15 Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = -1 Query: 327 IIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKW 647 + AGADF+L+PSRFEPCG+ Q++A R+G +PI +TGGL+DTV++G TGF S + A+ + RA T+ +L M+ M + W KK+ Sbjct: 359 MFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQQASAE----------ALRRCLERAFRTFRLPSLLSAMRRAAMLRPSGWDVAGKKY 456
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_XANC8 (Glycogen synthase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=glgA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.472e-15 Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = -1 Query: 327 IIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKW 647 + AGADF+L+PSRFEPCG+ Q++A R+G +PI +TGGL+DTV++G TGF S + A+ + RA T+ +L M+ M + W KK+ Sbjct: 359 MFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQQASAE----------ALRRCLERAFRTFRLPSLLSAMRRAAMLRPSGWDVAGKKY 456
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_SALTY (Glycogen synthase OS=Salmonella typhimurium GN=glgA PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 8.472e-15 Identity = 46/123 (37.40%), Postives = 65/123 (52.85%), Query Frame = -1 Query: 303 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 653 H I+ GAD IL+PSRFEPCG+ QL+ ++YGT+P+V TGGL DTV + G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 361 HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_SALTI (Glycogen synthase OS=Salmonella typhi GN=glgA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.472e-15 Identity = 46/123 (37.40%), Postives = 65/123 (52.85%), Query Frame = -1 Query: 303 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 653 H I+ GAD IL+PSRFEPCG+ QL+ ++YGT+P+V TGGL DTV + G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 361 HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_SALSV (Glycogen synthase OS=Salmonella schwarzengrund (strain CVM19633) GN=glgA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.472e-15 Identity = 46/123 (37.40%), Postives = 65/123 (52.85%), Query Frame = -1 Query: 303 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 653 H I+ GAD IL+PSRFEPCG+ QL+ ++YGT+P+V TGGL DTV + G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 361 HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_SALPK (Glycogen synthase OS=Salmonella paratyphi A (strain AKU_12601) GN=glgA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.472e-15 Identity = 46/123 (37.40%), Postives = 65/123 (52.85%), Query Frame = -1 Query: 303 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 653 H I+ GAD IL+PSRFEPCG+ QL+ ++YGT+P+V TGGL DTV + G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 361 HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
BLAST of DN621392 vs. ExPASy Swiss-Prot
Match: GLGA_SALPC (Glycogen synthase OS=Salmonella paratyphi C (strain RKS4594) GN=glgA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.472e-15 Identity = 46/123 (37.40%), Postives = 65/123 (52.85%), Query Frame = -1 Query: 303 HMIIAGADFILIPSRFEPCGIIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 653 H I+ GAD IL+PSRFEPCG+ QL+ ++YGT+P+V TGGL DTV + G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 361 HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477 The following BLAST results are available for this feature:
BLAST of DN621392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621392 ID=DN621392; Name=DN621392; organism=Citrus sinensis; type=EST; length=653bpback to top |