DN621354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621354 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.958e-26 Identity = 67/153 (43.79%), Postives = 103/153 (67.32%), Query Frame = 1 Query: 94 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTL--EYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 546 M RG+ ++KRIEN +RQVTFSKRR+GLLKKA E+SVLCDAEVAL++FS + KL+E+S+ S + +ERY+R +++ N + + E S L ++E L+ +++ +GE + S++ELQ +E Q+D L IR++K QL+ + I Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSS-IAATIERYQRRI---KEIGNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEI 149
BLAST of DN621354 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.340e-26 Identity = 63/152 (41.45%), Postives = 97/152 (63.82%), Query Frame = 1 Query: 94 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 549 M R ++Q+K+I+N RQVTFSKRR GL KKA E+SVLCDA+VALI+FS+ GKLF+YS+ S M++ILER + + +L +E YS+L + + GE+L L+++ELQ +E+ +++GL + RK +++ I+ Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSS-MKQILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSRVIERKGDKIMREIN 151
BLAST of DN621354 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.363e-26 Identity = 66/159 (41.51%), Postives = 104/159 (65.41%), Query Frame = 1 Query: 94 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYC-------YAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 549 M RG+ Q+KRIEN +RQVTFSKRR+GLLKKA E+SVLCDAEVALIVFS +GKL+E+++ S ++ +ERY Y ++ ++ + + +G L ++E L+ ++ +GE L + S++EL S+E +++ L IR RK +L+ + ++ Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASAS-TQKTIERYRTYTKENIGNKTVQQDIEQVKADADG--------LAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVA 150
BLAST of DN621354 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.658e-25 Identity = 60/153 (39.22%), Postives = 101/153 (66.01%), Query Frame = 1 Query: 94 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQ--ANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 546 MGRG++ +++I++ +RQVTFSKRR GL+KKA E+++LCDAEV LI+FS KL+++++ S ++ +ER+ E++L A+E++ W E L+ + LQ N + G +L LS+KELQ++E Q++ L+ IR ++ Q++ I Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSS-VKSTIERFNTAKMEEQELMNPASEVK---FWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEI 149
BLAST of DN621354 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 61/149 (40.94%), Postives = 97/149 (65.10%), Query Frame = 1 Query: 94 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSC-MERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLML 537 MGRG++++KRIEN NR VTFSKRR+GL+KKA EI+VLCDA+VALI+F++ GK+ +Y S + +L++Y++ + +E N + E ++K + LQ +H GED+ L+LK L +VE I+ GL +R + ++++ Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGKKLWDAKHE-----NLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVRDHQMEILI 144
BLAST of DN621354 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.300e-25 Identity = 59/153 (38.56%), Postives = 102/153 (66.67%), Query Frame = 1 Query: 94 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEI-EPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLS-LKELQSVEQQIDSGLKLIRSRKNQLMLQSI 546 MG+G++++KRIE+ RQVTFSKRR+G LKKA+E++VLCDA+V ++VFS KGKLF++ + + ++E + RY R + E + +E ++L+ ++ L+ + + GEDL+ +S + EL ++ Q++S L + +RK++LM Q + Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVI--LMELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQL 151
BLAST of DN621354 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 1.403e-24 Identity = 63/151 (41.72%), Postives = 94/151 (62.25%), Query Frame = 1 Query: 94 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSC------MERILERYERYCYAERQLQANEI---EPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSR 519 MGRG++++KRIEN NRQVTFSKRR+G+LKKA EI VLCDAEV +++FS+ GKL +Y T + RILE+Y Q + +I E + + + E ++K + +Q +H GEDL L KEL ++E+ +++G +R + Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKY--------QTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDK 143
BLAST of DN621354 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.394e-24 Identity = 57/149 (38.26%), Postives = 97/149 (65.10%), Query Frame = 1 Query: 100 RGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 546 R R+ ++RI+N RQVTFSKRR GL KKA E+S+LCDAEV L+VFS GKLF++++ S ME+I++RY + ++ + ++++ G + ++LK + + GE+L L++++LQ +E+ ++SGL + K++ +L I Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTS-MEQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEI 169
BLAST of DN621354 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.127e-24 Identity = 65/147 (44.22%), Postives = 95/147 (64.63%), Query Frame = 1 Query: 94 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSC-MERILERYERYCYAERQLQANEIEPNGNWTLEYSK---LKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRK 522 MGRG++++KRIEN NRQVT+SKRR+G++KKA E++VLCDA+VA+I+FS+ GK E+ + S ++ I +RY++ ++ E N TL + K R E+ QR MGEDL L EL+ +EQ +D+ LK +R RK Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQAIGTSLWIEQYE---NMQRTLSHLKDINRNLRTEIRQR-----MGEDLDGLEFDELRGLEQNVDAALKEVRHRK 139
BLAST of DN621354 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.333e-24 Identity = 59/153 (38.56%), Postives = 100/153 (65.36%), Query Frame = 1 Query: 94 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANE-IEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLAD-LSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 546 M RG+VQL+RIEN ++RQVTF KRR+GLLKKA E+S+LC+A++ +I+FS GKL++ +T ME ++ERY+ + ++ ++P E LK + +LQ+ ++ G + ++++EL ++E+ ++ + IRS K Q+M+Q I Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANACGDQRMDPK----QEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEI 149 The following BLAST results are available for this feature:
BLAST of DN621354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621354 ID=DN621354; Name=DN621354; organism=Citrus sinensis; type=EST; length=721bpback to top |