DN621349

Overview
NameDN621349
Unique NameDN621349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_THEEB (Phosphoglycerate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 2.804e-61
Identity = 117/157 (74.52%), Postives = 132/157 (84.08%), Query Frame = -2
Query:  200 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 670
            EDKL+L   L  KA+ KGV LLLPTDVV+AD FA DANS+VV   AIPD WMGLD+GP ++K F EAL   KT+IWNGPMGVFEFD+FA GTEAIA+ LAEL+ +GV TIIGGGDSVAAVEKVG+AD+MSHISTGGGASLELLEGK LPG+ ALDDA
Sbjct:  244 EDKLELAKHLETKAQEKGVELLLPTDVVVADNFANDANSQVVSIEAIPDDWMGLDIGPASVKRFQEALQDCKTVIWNGPMGVFEFDQFAKGTEAIARYLAELTSQGVCTIIGGGDSVAAVEKVGVADRMSHISTGGGASLELLEGKQLPGIAALDDA 400          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_CYAP7 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7424) GN=pgk PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 8.158e-61
Identity = 116/157 (73.89%), Postives = 129/157 (82.17%), Query Frame = -2
Query:  200 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 670
            EDKL+L  SL  KA  KGV LLLPTDVV+AD F A+AN K V    IPDGWMGLD+GPD++K F +AL   K++IWNGPMGVFEFDKFA GTEAIA  L  L+GKG TTIIGGGDSVAAVEKVG+ADKMSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  245 EDKLELAKSLEAKASEKGVQLLLPTDVVVADAFDANANDKTVKIEEIPDGWMGLDIGPDSVKLFQDALADCKSVIWNGPMGVFEFDKFAKGTEAIAYTLETLTGKGATTIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKVLPGIAALDEA 401          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_SYNSC (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9605) GN=pgk PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.065e-60
Identity = 117/157 (74.52%), Postives = 128/157 (81.53%), Query Frame = -2
Query:  200 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 670
            EDKL+L   L  KAK+ GV LLLPTDVV+AD FA DANS+     AIPDGWMGLD+GPD+IK F EAL   +T+IWNGPMGVFEFDKFA GT +IA  LA+LSGKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALD A
Sbjct:  245 EDKLELAKELEAKAKANGVQLLLPTDVVLADNFAPDANSQTADINAIPDGWMGLDIGPDSIKVFQEALADCQTVIWNGPMGVFEFDKFATGTNSIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDAA 401          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_MICAN (Phosphoglycerate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=pgk PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.392e-60
Identity = 113/157 (71.97%), Postives = 131/157 (83.44%), Query Frame = -2
Query:  200 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 670
            EDKL+L  SL  KAK KGV  LLPTDVV+ADKF  DA S++V    IPDGWMGLD+GP+++K F EAL   K+++WNGPMGVFEFDKFAAGT+AIA  LA+L+  G TTIIGGGDSVAAVEKVG+A+KMSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  246 EDKLELAKSLEAKAKEKGVEFLLPTDVVLADKFDKDAESQIVKVENIPDGWMGLDIGPESVKVFQEALSNCKSVLWNGPMGVFEFDKFAAGTDAIAHTLADLTATGTTTIIGGGDSVAAVEKVGVAEKMSHISTGGGASLELLEGKVLPGIAALDEA 402          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_CYAP8 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 8801) GN=pgk PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.817e-60
Identity = 115/156 (73.72%), Postives = 129/156 (82.69%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            +DKL+L  SL  KAK KGV  LLPTDVV+AD FA DAN+K V   AI DGWMGLD+GP+++K F  AL   K++IWNGPMGVFEFDKFA GTEAIA  LAEL+GKG  TIIGGGDSVAAVEKVG+ADKMSHISTGGGASLELLEGK LPG+ ALD+
Sbjct:  244 DDKLELAKSLEAKAKEKGVDFLLPTDVVLADNFAPDANAKTVSIDAIEDGWMGLDIGPESVKVFQAALADCKSVIWNGPMGVFEFDKFAKGTEAIAHTLAELTGKGTITIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKVLPGIAALDE 399          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PROM4 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=pgk PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.374e-60
Identity = 113/156 (72.44%), Postives = 132/156 (84.62%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            +DKL+L  +L EKAKSKGV LLLPTDVV+AD F+ DANS++    +IP+GWMGLD+GPD++K F +AL+  +T+IWNGPMGVFEFDKFA GT +IA  L+ LS KG  TIIGGGDSVAAVEK GLADKMSHISTGGGASLELLEGKTLPGV ALD+
Sbjct:  245 DDKLELAKALEEKAKSKGVELLLPTDVVLADNFSPDANSQIAQINSIPEGWMGLDIGPDSVKLFQDALEDCQTVIWNGPMGVFEFDKFANGTNSIATTLSVLSQKGCCTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKTLPGVAALDE 400          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_ACAM1 (Phosphoglycerate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=pgk PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.049e-60
Identity = 112/157 (71.34%), Postives = 131/157 (83.44%), Query Frame = -2
Query:  200 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 670
            EDKLDL  +L  KAK KGV+LLLP+DVV+AD FAADAN++ V    IPDGWMGLD+GP+++K F  AL   KT+IWNGPMGVFEFDKFAAGT+A+A  LA ++  G  TIIGGGDSVAAVEKVG+A+KMSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  245 EDKLDLARTLEAKAKEKGVALLLPSDVVVADNFAADANAQTVSINNIPDGWMGLDIGPNSVKEFQAALSDCKTVIWNGPMGVFEFDKFAAGTDAVAHSLAAITETGADTIIGGGDSVAAVEKVGVAEKMSHISTGGGASLELLEGKVLPGIAALDEA 401          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_SYNJA (Phosphoglycerate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=pgk PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.178e-59
Identity = 111/156 (71.15%), Postives = 132/156 (84.62%), Query Frame = -2
Query:  200 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 667
            DKLDL  SLMEKAK++GV LLLP DVV+AD+F  DAN++ V   AIP+ WMGLD+GP+++K+F  AL   KT++WNGPMGVFEFD+FAAGTEAIA+ LA+L+  G  TIIGGGDSVAAVEKVGLADKM+HISTGGGASLELLEGK LPG+ AL +A
Sbjct:  257 DKLDLARSLMEKAKARGVELLLPVDVVVADRFDKDANAQTVSIHAIPEDWMGLDIGPESVKAFQAALQGCKTVVWNGPMGVFEFDRFAAGTEAIARTLADLTQAGAITIIGGGDSVAAVEKVGLADKMTHISTGGGASLELLEGKELPGIAALSEA 412          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_SYNP2 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=pgk PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.624e-59
Identity = 115/157 (73.25%), Postives = 129/157 (82.17%), Query Frame = -2
Query:  200 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 670
            +DK+DL  SLMEKA+ K   +LLPTDV++ADKFA DA +K V   AIPDGWMGLD+G D++K F EALD   T IWNGPMGVFEFDKFA GTEAIAK LA  +  G  TIIGGGDSVAAVEKVG+ADKMSHISTGGGASLELLEGK LPG++ALDDA
Sbjct:  245 DDKIDLAKSLMEKAQGK---ILLPTDVIVADKFAPDAEAKTVSVDAIPDGWMGLDIGADSVKVFQEALDGCGTAIWNGPMGVFEFDKFAVGTEAIAKTLAGATETGTVTIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKELPGIVALDDA 398          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_SYNJB (Phosphoglycerate kinase OS=Synechococcus sp. GN=pgk PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.302e-58
Identity = 109/156 (69.87%), Postives = 130/156 (83.33%), Query Frame = -2
Query:  200 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 667
            DKLDL  SLMEKAK +GV LLLP DVV+AD+F  DA ++ V   AIP+ WMGLD+GP+++K+F  AL   +T++WNGPMGVFEFD+FA GTEAIA+ LA+L+  G TTIIGGGDSVAAVEKVGLADKM+HISTGGGASLELLEGK LPG+ AL +A
Sbjct:  257 DKLDLARSLMEKAKERGVELLLPVDVVVADRFDKDAQAQTVSIHAIPEDWMGLDIGPESVKAFQSALQGCQTVVWNGPMGVFEFDRFALGTEAIARTLADLTQAGATTIIGGGDSVAAVEKVGLADKMTHISTGGGASLELLEGKVLPGIAALTEA 412          
The following BLAST results are available for this feature:
BLAST of DN621349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_THEEB2.804e-6174.52Phosphoglycerate kinase OS=Thermosynechococcus elo... [more]
PGK_CYAP78.158e-6173.89Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_SYNSC1.065e-6074.52Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_MICAN1.392e-6071.97Phosphoglycerate kinase OS=Microcystis aeruginosa ... [more]
PGK_CYAP81.817e-6073.72Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_PROM42.374e-6072.44Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_ACAM14.049e-6071.34Phosphoglycerate kinase OS=Acaryochloris marina (s... [more]
PGK_SYNJA1.178e-5971.15Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNP22.624e-5973.25Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNJB1.302e-5869.87Phosphoglycerate kinase OS=Synechococcus sp. GN=pg... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06J11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621349 ID=DN621349; Name=DN621349; organism=Citrus sinensis; type=EST; length=671bp
TTTTTTTTTTTTTTTTAATCCAGAAAAATGCATCACCATTGATGCCTGTG
AGAAAGAATTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATG
ATAAAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACA
ACTCTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAA
GCATCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTC
TAAGCTGGCTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGAC
CAACCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTC
ACTCCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCC
AGCAGCAAATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGATGA
TGGTTTTAGTAGTATCCAAAGCTTCACTGAATGACTTGATGGCATCAGGT
CCAACATCCAAGCCCATCCAACCATCTGGAATTGCCGTTGCTGGCACCAC
CTTGCTGTTGGCATCAGCAGCAAACTTGTCAGCAATAACAACATCAGTAG
GGAGCAGAAGAGACACCCCTTTAGATTTGGCCTTCTCCATAAGTGACGTA
CCGAGATCAAGCTTGTCTTCC
back to top