DN621349

Overview
NameDN621349
Unique NameDN621349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGKH_VOLCA (Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 4.949e-58
Identity = 110/156 (70.51%), Postives = 130/156 (83.33%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            EDKL+L  +L   AK+KGV LLLP+DVV+ADKF A+AN++ V   AIPDGWMGLD+GPD+IK+F +AL   KT++WNGPMGVFEF KFA GT AIA  L+EL+ KG  TIIGGGDSVAAVE+ G+A+KMSHISTGGGASLELLEGK LPGV ALD+
Sbjct:  306 EDKLELAKNLEAIAKAKGVQLLLPSDVVVADKFDANANTQTVSVEAIPDGWMGLDIGPDSIKTFQDALADAKTVVWNGPMGVFEFPKFAVGTVAIANTLSELTPKGAITIIGGGDSVAAVEQAGVAEKMSHISTGGGASLELLEGKVLPGVAALDE 461          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PROMA (Phosphoglycerate kinase OS=Prochlorococcus marinus GN=pgk PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 8.442e-58
Identity = 110/156 (70.51%), Postives = 129/156 (82.69%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            +DKLDL  +L +KAK KGV LLLP+DVV+AD F+ DA+S++V   +IP+GWMGLD+G +++K F +AL   KT+IWNGPMGVFEFDKFA GT +I+  LAELS KG  TIIGGGDSVAAVEK GLA KMSHISTGGGASLELLEGK LPGV ALDD
Sbjct:  245 DDKLDLARALEKKAKEKGVQLLLPSDVVLADNFSPDASSQMVQIDSIPEGWMGLDIGKESVKLFQDALADCKTVIWNGPMGVFEFDKFANGTNSISTTLAELSAKGCCTIIGGGDSVAAVEKAGLASKMSHISTGGGASLELLEGKVLPGVAALDD 400          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PROMS (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain AS9601) GN=pgk PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.190e-57
Identity = 116/158 (73.42%), Postives = 127/158 (80.38%), Query Frame = -2
Query:  200 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 670
            EDKL+L   L  KAK+KGV LLLPTDVV+AD+F+ DANSK+    AI   WMGLD+GPD+IK F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGKTLPGV AL+DA
Sbjct:  245 EDKLELAKDLEAKAKAKGVELLLPTDVVLADEFSPDANSKISQIDAISGNWMGLDIGPDSIKVFQNALAECKTIIWNGPMGVFEFDKFADGTNAIATTLADLSAFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKTLPGVAALNDA 402          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PROMT (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=pgk PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 7.147e-57
Identity = 110/157 (70.06%), Postives = 127/157 (80.89%), Query Frame = -2
Query:  200 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 670
            EDKL+L ++L +KA+ KGV  LLPTDVV+AD F+ DANSK+    AI +GWMGLD+G ++++ F  AL   KT+IWNGPMGVFEF+KFA GT AIA  LAELS +G  TIIGGGDSVAAVEK GLA KMSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  245 EDKLELASALEKKAQEKGVEFLLPTDVVLADNFSPDANSKLSKVDAISEGWMGLDIGSESVELFQNALKDCKTVIWNGPMGVFEFEKFANGTNAIANTLAELSAQGCCTIIGGGDSVAAVEKAGLAKKMSHISTGGGASLELLEGKVLPGVSALDDA 401          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PROM9 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=pgk PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 9.334e-57
Identity = 115/158 (72.78%), Postives = 127/158 (80.38%), Query Frame = -2
Query:  200 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 670
            EDKL+L   L  KAK+KGV LLLPTDVV+AD+F+ DANSK+    +I   WMGLD+GPD+IK F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGKTLPGV AL+DA
Sbjct:  245 EDKLELAKDLEAKAKAKGVELLLPTDVVLADEFSPDANSKISQIDSISGNWMGLDIGPDSIKVFQNALAECKTIIWNGPMGVFEFDKFADGTNAIATTLADLSAFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKTLPGVAALNDA 402          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PROM1 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=pgk PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 9.334e-57
Identity = 110/157 (70.06%), Postives = 126/157 (80.25%), Query Frame = -2
Query:  200 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 670
            EDKL+L ++L +KAK KGV  LLPTDVV+AD F+ DANSK+    AI +GWMGLD+G ++++ F  AL   KT+IWNGPMGVFEF+KFA GT AIA  LAELS +G  TIIGGGDSVAAVEK GLA  MSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  245 EDKLELASALEKKAKEKGVEFLLPTDVVLADNFSPDANSKLSKVDAISEGWMGLDIGSESVELFQNALKDCKTVIWNGPMGVFEFEKFANGTNAIANTLAELSAQGCCTIIGGGDSVAAVEKAGLAKNMSHISTGGGASLELLEGKVLPGVSALDDA 401          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PROM2 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=pgk PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.079e-56
Identity = 115/158 (72.78%), Postives = 126/158 (79.75%), Query Frame = -2
Query:  200 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 670
            EDKL L   L  KAK+KGV LLLPTDVV+AD+F+ DANSK+    +I   WMGLD+GPD+IK F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGKTLPGV AL+DA
Sbjct:  245 EDKLKLAKDLEAKAKAKGVELLLPTDVVLADEFSPDANSKISRIDSISGNWMGLDIGPDSIKVFQNALAECKTIIWNGPMGVFEFDKFAEGTNAIATTLADLSAFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKTLPGVAALNDA 402          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGKH_CHLRE (Phosphoglycerate kinase, chloroplastic OS=Chlamydomonas reinhardtii PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.079e-56
Identity = 106/156 (67.95%), Postives = 129/156 (82.69%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            +DK++L   L E AK+KGV LLLPTDVV+ADKF A+AN++ VP TAIPDGWMGLD+GPD++K+F++AL   KT++WNGPMGVFEF +    T +IA  LA L+ KG  TIIGGGDSVAAVE+ G+A+KMSHISTGGGASLELLEGK LPGV ALD+
Sbjct:  305 DDKIELAKKLEEMAKAKGVQLLLPTDVVVADKFDANANTQTVPITAIPDGWMGLDIGPDSVKTFNDALADAKTVVWNGPMGVFEFPQVRQRTVSIANTLAGLTPKGCITIIGGGDSVAAVEQAGVAEKMSHISTGGGASLELLEGKVLPGVAALDE 460          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_TRIEI (Phosphoglycerate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pgk PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.689e-55
Identity = 106/156 (67.95%), Postives = 128/156 (82.05%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            EDK++L  SL  KAK KGV++LLPTDVV+ADKF  +AN++ V   AIPDGWMGLD+GP++ K F +AL   KT+IWNGPMGVFE +KFA GTEAIA+ LA+   +   TIIGGGDSVAAVE++GL +KMSHISTGGGASLELLEGK LPG++ALDD
Sbjct:  244 EDKIELAKSLEAKAKEKGVTMLLPTDVVVADKFDPEANTQTVSIEAIPDGWMGLDIGPESAKVFQDALADCKTVIWNGPMGVFEMEKFAKGTEAIAQTLAD--KQDAITIIGGGDSVAAVEQLGLGEKMSHISTGGGASLELLEGKKLPGIVALDD 397          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PROM0 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=pgk PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 8.736e-55
Identity = 112/158 (70.89%), Postives = 125/158 (79.11%), Query Frame = -2
Query:  200 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 670
            EDKL+L   L  KAK+KGV LLLPTDVV+A++F+ DA SK+    +I   WMGLD+GPD+IK F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV AL+DA
Sbjct:  245 EDKLELAKDLEAKAKAKGVELLLPTDVVLANEFSPDAESKISQIDSISGNWMGLDIGPDSIKVFQNALAECKTIIWNGPMGVFEFDKFADGTNAIATTLADLSAFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKILPGVAALNDA 402          
The following BLAST results are available for this feature:
BLAST of DN621349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGKH_VOLCA4.949e-5870.51Phosphoglycerate kinase, chloroplastic OS=Volvox c... [more]
PGK_PROMA8.442e-5870.51Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROMS4.190e-5773.42Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROMT7.147e-5770.06Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM99.334e-5772.78Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM19.334e-5770.06Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM22.079e-5672.78Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGKH_CHLRE2.079e-5667.95Phosphoglycerate kinase, chloroplastic OS=Chlamydo... [more]
PGK_TRIEI6.689e-5567.95Phosphoglycerate kinase OS=Trichodesmium erythraeu... [more]
PGK_PROM08.736e-5570.89Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06J11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621349 ID=DN621349; Name=DN621349; organism=Citrus sinensis; type=EST; length=671bp
TTTTTTTTTTTTTTTTAATCCAGAAAAATGCATCACCATTGATGCCTGTG
AGAAAGAATTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATG
ATAAAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACA
ACTCTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAA
GCATCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTC
TAAGCTGGCTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGAC
CAACCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTC
ACTCCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCC
AGCAGCAAATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGATGA
TGGTTTTAGTAGTATCCAAAGCTTCACTGAATGACTTGATGGCATCAGGT
CCAACATCCAAGCCCATCCAACCATCTGGAATTGCCGTTGCTGGCACCAC
CTTGCTGTTGGCATCAGCAGCAAACTTGTCAGCAATAACAACATCAGTAG
GGAGCAGAAGAGACACCCCTTTAGATTTGGCCTTCTCCATAAGTGACGTA
CCGAGATCAAGCTTGTCTTCC
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