DN621349

Overview
NameDN621349
Unique NameDN621349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PROMP (Phosphoglycerate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=pgk PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.542e-54
Identity = 112/158 (70.89%), Postives = 125/158 (79.11%), Query Frame = -2
Query:  200 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 670
            EDKL+L  +L  KAK+KGV LLLP+DV++A++F+ DA SKV    AI   WMGLD+GP +IK F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGKTLPGV AL DA
Sbjct:  245 EDKLELARNLEAKAKNKGVELLLPSDVLLANEFSPDAESKVSQIDAISGDWMGLDIGPQSIKVFQNALAECKTIIWNGPMGVFEFDKFAEGTNAIATTLADLSSFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKTLPGVAALKDA 402          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PROM5 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=pgk PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.395e-52
Identity = 108/157 (68.79%), Postives = 124/157 (78.98%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            EDKL+L  +L EKAK+KGV LLLP+DVV+A++F+  A SKV    +I   WMGLD+GP +IK F  AL   KTIIWNGPMGVFEFDKFA GT +IA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV AL++
Sbjct:  245 EDKLELARNLEEKAKTKGVELLLPSDVVLANEFSPTAESKVSQIDSISGDWMGLDIGPQSIKVFQNALAECKTIIWNGPMGVFEFDKFAEGTNSIATTLADLSSFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKNLPGVAALNE 401          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_BREBN (Phosphoglycerate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pgk PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.995e-51
Identity = 96/156 (61.54%), Postives = 120/156 (76.92%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            +DKLDL  +LME+AK +GV LL+P DVV+AD+FAADA  +VV   AIP+GWM LD+GP  ++ +   +  +KT++WNGPMGVFE D FA GT  +AK +A  SG   TTIIGGGDSVAAVEK G+A++M+HISTGGGASLE +EGK LPGV  L D
Sbjct:  240 DDKLDLARTLMEQAKERGVQLLMPVDVVVADRFAADAEKQVVAIDAIPEGWMALDIGPKTVEQYHSVIVDSKTVVWNGPMGVFEMDAFAGGTIGVAKAMAACSG---TTIIGGGDSVAAVEKAGVAEQMTHISTGGGASLEFMEGKELPGVAVLAD 392          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_DEIRA (Phosphoglycerate kinase OS=Deinococcus radiodurans GN=pgk PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.443e-49
Identity = 97/154 (62.99%), Postives = 119/154 (77.27%), Query Frame = -2
Query:  209 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 670
            +D+LDL   L+EK   K   LLLPTD V ADKFAADA SKVVPA  IPDGWMGLD+GPD  +++++AL   KT+ WNGPMGVFEFD+FAAGT A+A  +  L  +   T++GGGDSV+A+ K G AD++ HISTGGGASLELLEGK LPGV+A+
Sbjct:  261 DDQLDLAKGLLEKYGDK---LLLPTDAVAADKFAADAQSKVVPADQIPDGWMGLDIGPDTQRAYADALQGAKTVFWNGPMGVFEFDQFAAGTNAVAAAVGSLKDQAY-TVVGGGDSVSAINKSGKADQIDHISTGGGASLELLEGKELPGVVAM 410          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_CHLT3 (Phosphoglycerate kinase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=pgk PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.215e-49
Identity = 91/157 (57.96%), Postives = 117/157 (74.52%), Query Frame = -2
Query:  200 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 670
            +DKL+L  S++EKAK+ GV  LLPTDVV+ADKF  DAN+K+    +I D WMGLD+GP+    F E +   KT+IWNGPMGVFE +KFA GT A+A+ LA+ + +G  T+IGGGDS AA+   GL D ++H+STGGGASLE LEGK LPG+ AL +A
Sbjct:  241 DDKLELAKSILEKAKTSGVKFLLPTDVVLADKFDQDANTKIATIDSIEDDWMGLDIGPETANCFREEVVNAKTVIWNGPMGVFEMEKFAKGTMAVAQALADATKQGAITVIGGGDSAAAIAVAGLEDSVTHVSTGGGASLEFLEGKELPGIAALSNA 397          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_CHLAD (Phosphoglycerate kinase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=pgk PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.215e-49
Identity = 94/156 (60.26%), Postives = 118/156 (75.64%), Query Frame = -2
Query:  200 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 667
            + + +   LM KA+ +G  LLLP DVVIAD F+A+A  +VV  TAIP GW  LD+GP  I+ +S  + + +T+IWNGPMGVFE + FAAGT AIA+ +AE S  G  TI+GGGDSVAAVE+ GLA+KM+H+STGGGASLELLEG+ LPGV AL DA
Sbjct:  244 ESVPVAQQLMAKAEERGARLLLPVDVVIADAFSAEAQRQVVEVTAIPSGWRVLDIGPKTIELYSAEIRSARTVIWNGPMGVFELEPFAAGTRAIAQAMAEASANGAITIVGGGDSVAAVEQAGLAEKMAHVSTGGGASLELLEGRVLPGVAALQDA 399          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_ROSCS (Phosphoglycerate kinase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pgk PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.222e-48
Identity = 95/156 (60.90%), Postives = 119/156 (76.28%), Query Frame = -2
Query:  200 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 667
            D   +  SL+++A  +GV L+LPTDVVIAD F+ADAN KVVP   IP GW  LD+GP+ I++++E +   +T+IWNGPMGVFE   FA GT AIA+ +A   G    TIIGGGDSVAA+E++GLADK+ HISTGGGASLELLEG+ LPGV AL+DA
Sbjct:  243 DSAPIAKSLLDQAAQRGVRLMLPTDVVIADAFSADANRKVVPVGEIPPGWRALDIGPETIRAYTEVITGAQTVIWNGPMGVFELAPFAEGTRAIAQAMANCPG---MTIIGGGDSVAAIEQMGLADKIRHISTGGGASLELLEGRILPGVAALNDA 395          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_BACST (Phosphoglycerate kinase OS=Bacillus stearothermophilus GN=pgk PE=1 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.596e-48
Identity = 95/156 (60.90%), Postives = 116/156 (74.36%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            EDK++L  S MEKAK KGV   +P DVV+AD+FA DAN+KVVP  AIP  W  LD+GP   + + + +  +K ++WNGPMGVFE D FA GT+AIA+ LAE       ++IGGGDS AAVEK GLADKM HISTGGGASLE +EGK LPGV+AL+D
Sbjct:  240 EDKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVPIDAIPADWSALDIGPKTRELYRDVIRESKLVVWNGPMGVFEMDAFAHGTKAIAEALAE--ALDTYSVIGGGDSAAAVEKFGLADKMDHISTGGGASLEFMEGKQLPGVVALED 393          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_CHLSY (Phosphoglycerate kinase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=pgk PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.084e-48
Identity = 93/156 (59.62%), Postives = 115/156 (73.72%), Query Frame = -2
Query:  200 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 667
            D + +   LM +A+ +G  LLLP DVVIAD F+ADA  +VV  + IP GW  LD+GP  I+ +S  +   +T+IWNGPMGVFE + FA GT AIA+ +AE +  G  TI+GGGDSVAAVE+ GLADKMSH+STGGGASLELLEG+ LPGV AL DA
Sbjct:  244 DSVPVAQQLMARAEERGARLLLPVDVVIADAFSADAQRQVVDVSDIPAGWRVLDIGPKTIERYSAEIRAARTVIWNGPMGVFELEPFAVGTRAIAQAMAEAAANGAITIVGGGDSVAAVEQAGLADKMSHVSTGGGASLELLEGRVLPGVAALQDA 399          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_CHLAA (Phosphoglycerate kinase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=pgk PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.084e-48
Identity = 93/156 (59.62%), Postives = 115/156 (73.72%), Query Frame = -2
Query:  200 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 667
            D + +   LM +A+ +G  LLLP DVVIAD F+ADA  +VV  + IP GW  LD+GP  I+ +S  +   +T+IWNGPMGVFE + FA GT AIA+ +AE +  G  TI+GGGDSVAAVE+ GLADKMSH+STGGGASLELLEG+ LPGV AL DA
Sbjct:  244 DSVPVAQQLMARAEERGARLLLPVDVVIADAFSADAQRQVVDVSDIPAGWRVLDIGPKTIERYSAEIRAARTVIWNGPMGVFELEPFAVGTRAIAQAMAEAAANGAITIVGGGDSVAAVEQAGLADKMSHVSTGGGASLELLEGRVLPGVAALQDA 399          
The following BLAST results are available for this feature:
BLAST of DN621349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PROMP2.542e-5470.89Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM51.395e-5268.79Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_BREBN9.995e-5161.54Phosphoglycerate kinase OS=Brevibacillus brevis (s... [more]
PGK_DEIRA1.443e-4962.99Phosphoglycerate kinase OS=Deinococcus radiodurans... [more]
PGK_CHLT33.215e-4957.96Phosphoglycerate kinase OS=Chloroherpeton thalassi... [more]
PGK_CHLAD3.215e-4960.26Phosphoglycerate kinase OS=Chloroflexus aggregans ... [more]
PGK_ROSCS1.222e-4860.90Phosphoglycerate kinase OS=Roseiflexus castenholzi... [more]
PGK_BACST1.596e-4860.90Phosphoglycerate kinase OS=Bacillus stearothermoph... [more]
PGK_CHLSY2.084e-4859.62Phosphoglycerate kinase OS=Chloroflexus aurantiacu... [more]
PGK_CHLAA2.084e-4859.62Phosphoglycerate kinase OS=Chloroflexus aurantiacu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06J11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621349 ID=DN621349; Name=DN621349; organism=Citrus sinensis; type=EST; length=671bp
TTTTTTTTTTTTTTTTAATCCAGAAAAATGCATCACCATTGATGCCTGTG
AGAAAGAATTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATG
ATAAAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACA
ACTCTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAA
GCATCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTC
TAAGCTGGCTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGAC
CAACCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTC
ACTCCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCC
AGCAGCAAATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGATGA
TGGTTTTAGTAGTATCCAAAGCTTCACTGAATGACTTGATGGCATCAGGT
CCAACATCCAAGCCCATCCAACCATCTGGAATTGCCGTTGCTGGCACCAC
CTTGCTGTTGGCATCAGCAGCAAACTTGTCAGCAATAACAACATCAGTAG
GGAGCAGAAGAGACACCCCTTTAGATTTGGCCTTCTCCATAAGTGACGTA
CCGAGATCAAGCTTGTCTTCC
back to top