DN621349

Overview
NameDN621349
Unique NameDN621349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_STRM5 (Phosphoglycerate kinase OS=Stenotrophomonas maltophilia (strain R551-3) GN=pgk PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.603e-32
Identity = 69/154 (44.81%), Postives = 102/154 (66.23%), Query Frame = -2
Query:  206 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 667
            D LD    ++  AK++G  + LP DVV A +F  DA ++V    A+ +  + LD+GP     +++ ++   T++WNGP+GVFEF+ F+ GTEA+A+ +A        +I GGGD++AAV+K  +A ++S+ISTGGGA LE LEGKTLP V ALD
Sbjct:  237 DLLDTAKKIVADAKARGADIPLPVDVVTAKQFLPDAVAEVKAVDAVAEDDLILDIGPQTAAQYAQLIENAGTVVWNGPVGVFEFEAFSKGTEALARAIA---SSNAFSIAGGGDTLAAVDKFDIAAQVSYISTGGGAFLEFLEGKTLPAVAALD 387          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_SHESW (Phosphoglycerate kinase OS=Shewanella sp. (strain W3-18-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.603e-32
Identity = 69/153 (45.10%), Postives = 105/153 (68.63%), Query Frame = -2
Query:  209 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 667
            D +D    L+  A+S+G  + +PTDVV+A +F+  A + +   + + D  M  D+GPD+ ++ ++ +++  TI+WNGP+GVFEFD+F  GT+ IA+ +A+       +I GGGD++AAV+K G+ADK+S+ISTGGGA LE LEGK LP V  L
Sbjct:  237 DLIDEAKRLVANAQSRGGDIPVPTDVVVAGEFSPTATATLKSVSDVSDSDMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIAD---SKAFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAVAML 386          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_SHEPC (Phosphoglycerate kinase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=pgk PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.603e-32
Identity = 69/153 (45.10%), Postives = 105/153 (68.63%), Query Frame = -2
Query:  209 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 667
            D +D    L+  A+S+G  + +PTDVV+A +F+  A + +   + + D  M  D+GPD+ ++ ++ +++  TI+WNGP+GVFEFD+F  GT+ IA+ +A+       +I GGGD++AAV+K G+ADK+S+ISTGGGA LE LEGK LP V  L
Sbjct:  237 DLIDEAKRLVANAQSRGGDIPVPTDVVVAGEFSPTATATLKSVSDVSDSDMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIAD---SKAFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAVAML 386          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_SHEPA (Phosphoglycerate kinase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=pgk PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.603e-32
Identity = 69/154 (44.81%), Postives = 104/154 (67.53%), Query Frame = -2
Query:  206 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 667
            D ++    L+  A+S+G  + +PTDVV+A +F+  A + +   + + D  M  D+GPD+ ++ +E +    T++WNGP+GVFEFD+F  GT+ IA+ +AE       +I GGGD++AAV+K G+ADK+S+ISTGGGA LE LEGK LP V  L+
Sbjct:  237 DLIEEAQRLVANAQSRGGDIPVPTDVVVAGEFSPTATATLKDVSDVSDTDMIFDIGPDSAEALAEIIKNAGTVVWNGPVGVFEFDQFGEGTKRIAQAIAE---SNAFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAVAMLE 387          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_SHELP (Phosphoglycerate kinase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=pgk PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.603e-32
Identity = 71/154 (46.10%), Postives = 104/154 (67.53%), Query Frame = -2
Query:  206 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 667
            D +D    L+  A+S+G  + +PTDVV+A +F+  A++ +     + D  M  D+GPD+ ++ +E L    TI+WNGP+GVFEFD+F  GT+ IA+ +A+ S     +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L+
Sbjct:  237 DLIDEAKRLVANAQSRGGDIPVPTDVVVASEFSPTASATLKAVDQVADEDMIFDIGPDSAEALAEILKNAGTIVWNGPVGVFEFDQFGEGTKRIAQAIADSS---AFSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAVAMLE 387          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGKD_TRYBB (Phosphoglycerate kinase A OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.603e-32
Identity = 75/157 (47.77%), Postives = 101/157 (64.33%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGK-GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            E KL+   SL++KA+ + V ++LP D V   +F A  +  +     IP+G M LD+GP  I+ + + +   K+ IWNGPMGVFE   ++ GT AIAK +   + K G+ +IIGGG+S  A E  G    +SH+STGGGASLELLEGKTLPGV  LDD
Sbjct:  351 ESKLEFARSLLKKAEDRKVQIILPIDHVCHTEFKAVDSPLITEDQNIPEGHMALDIGPKTIEKYVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKAMGRGTQKRGLMSIIGGGESAGAAELCGKL-SISHVSTGGGASLELLEGKTLPGVAVLDD 506          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGKA_TRYBB (Phosphoglycerate kinase A OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.603e-32
Identity = 75/157 (47.77%), Postives = 102/157 (64.97%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGK-GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            E KL+   SL++KA+ + V ++LP D V   +F A  +  +     IP+G M LD+GP  I+ + + +   K+ IWNGPMGVFE   ++ GT AIAK +   + K G+ +IIGGG+S  A E    A ++SH+STGGGASLELLEGKTLPGV  LDD
Sbjct:  351 ESKLEFARSLLKKAEDRKVQVILPIDHVCHTEFKAVDSPLITEDQNIPEGHMALDIGPKTIEKYVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKAMGRGTQKRGLMSIIGGGESAGAAE----AARISHVSTGGGASLELLEGKTLPGVAVLDD 503          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_STRGG (Phosphoglycerate kinase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=pgk PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.094e-32
Identity = 77/162 (47.53%), Postives = 100/162 (61.73%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFA-----ADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLPGVLALDD 670
            ED++      + +A+ KGV  +LP DVV+A  F      A A+   V A A+P G MGLD GP+  K ++  L    T+ WNGPMGVFE   FA GT A+A+ L + S     +++GGGDS AAV  +G  +    HISTGGGASLE LEGKTLPG+ AL+D
Sbjct:  245 EDQIPAVREYLRRAEEKGVEFVLPVDVVVAPSFPDLKTKAPAHPTTVAADAMPAGQMGLDNGPETNKLYASKLADAATVFWNGPMGVFEHPDFADGTRAVAQALVDSS---AFSVVGGGDSAAAVRILGFDENAFGHISTGGGASLEYLEGKTLPGLAALED 403          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_STRAW (Phosphoglycerate kinase OS=Streptomyces avermitilis GN=pgk PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.094e-32
Identity = 76/162 (46.91%), Postives = 101/162 (62.35%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFA-----ADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLAD-KMSHISTGGGASLELLEGKTLPGVLALDD 670
            ED++      ME+A+  GV L+LP DV+++ +F      A AN   V A AIP    GLD+GP+  K ++  L    T+ WNGPMGVFE   +A GT+A+A+ L +       T++GGGDS AAV  +G  +    HISTGGGASLE LEGKTLPG+ AL+D
Sbjct:  245 EDQIPTVKEYMERAEKNGVELVLPVDVLVSTEFPDLKTKAPANPTTVAADAIPADQEGLDIGPETRKLYASKLADAATVFWNGPMGVFEHPDYAEGTKAVAQALVD---SQAFTVVGGGDSAAAVRILGFDETAFGHISTGGGASLEYLEGKTLPGLAALED 403          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_NEIM0 (Phosphoglycerate kinase OS=Neisseria meningitidis serogroup C (strain 053442) GN=pgk PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.094e-32
Identity = 70/154 (45.45%), Postives = 102/154 (66.23%), Query Frame = -2
Query:  206 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 667
            D ++    +M K  +KG S+ LPTDVV+A  FAADA + V     + +  M LD+GP +  + ++ L    T++WNGP+GVFEFD+FA GT+A+ + +A+       +I GGGD++AA+ K G+ D++ +ISTGGGA LE LEGK LP V AL+
Sbjct:  238 DLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFAADAEAVVKDIADVAEDEMILDIGPKSAAALADLLKAADTVVWNGPVGVFEFDQFAGGTKALTEAIAQ---SKAFSIAGGGDTLAAIAKFGVTDQIGYISTGGGAFLEFLEGKELPAVAALE 388          
The following BLAST results are available for this feature:
BLAST of DN621349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_STRM51.603e-3244.81Phosphoglycerate kinase OS=Stenotrophomonas maltop... [more]
PGK_SHESW1.603e-3245.10Phosphoglycerate kinase OS=Shewanella sp. (strain ... [more]
PGK_SHEPC1.603e-3245.10Phosphoglycerate kinase OS=Shewanella putrefaciens... [more]
PGK_SHEPA1.603e-3244.81Phosphoglycerate kinase OS=Shewanella pealeana (st... [more]
PGK_SHELP1.603e-3246.10Phosphoglycerate kinase OS=Shewanella loihica (str... [more]
PGKD_TRYBB1.603e-3247.77Phosphoglycerate kinase A OS=Trypanosoma brucei br... [more]
PGKA_TRYBB1.603e-3247.77Phosphoglycerate kinase A OS=Trypanosoma brucei br... [more]
PGK_STRGG2.094e-3247.53Phosphoglycerate kinase OS=Streptomyces griseus su... [more]
PGK_STRAW2.094e-3246.91Phosphoglycerate kinase OS=Streptomyces avermitili... [more]
PGK_NEIM02.094e-3245.45Phosphoglycerate kinase OS=Neisseria meningitidis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06J11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621349 ID=DN621349; Name=DN621349; organism=Citrus sinensis; type=EST; length=671bp
TTTTTTTTTTTTTTTTAATCCAGAAAAATGCATCACCATTGATGCCTGTG
AGAAAGAATTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATG
ATAAAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACA
ACTCTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAA
GCATCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTC
TAAGCTGGCTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGAC
CAACCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTC
ACTCCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCC
AGCAGCAAATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGATGA
TGGTTTTAGTAGTATCCAAAGCTTCACTGAATGACTTGATGGCATCAGGT
CCAACATCCAAGCCCATCCAACCATCTGGAATTGCCGTTGCTGGCACCAC
CTTGCTGTTGGCATCAGCAGCAAACTTGTCAGCAATAACAACATCAGTAG
GGAGCAGAAGAGACACCCCTTTAGATTTGGCCTTCTCCATAAGTGACGTA
CCGAGATCAAGCTTGTCTTCC
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