DN621349

Overview
NameDN621349
Unique NameDN621349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_DESDA (Phosphoglycerate kinase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=pgk PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.039e-31
Identity = 71/156 (45.51%), Postives = 98/156 (62.82%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            ED L     +M  AK+    L LP DV+ A++ A    + +     +P   M LD+GP+ +  + + L    T++WNGP+G FE + F  GT+A+A+ L++        ++GGGDSVAAVEK GLAD+M +ISTGGGASLELLEGK LP V AL+D
Sbjct:  235 EDLLPEAQKIMALAKTLNKELPLPVDVITAEELAPRQQTMLHAVGDVPGDQMILDIGPETLTLYEKFLSKAATVVWNGPVGAFEIEPFGDGTKALAEYLSDSKA---FVVVGGGDSVAAVEKYGLADRMGYISTGGGASLELLEGKKLPSVAALED 387          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_SHESH (Phosphoglycerate kinase OS=Shewanella sediminis (strain HAW-EB3) GN=pgk PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.357e-31
Identity = 69/146 (47.26%), Postives = 100/146 (68.49%), Query Frame = -2
Query:  206 LMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 643
            L+  A+S+G  + +PTDVV+A +F+  A++ +   + +    M  D+GPD+ ++ SE L    TI+WNGP+GVFEFD+F  GT+ IA+ +AE       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L+
Sbjct:  245 LVANAQSRGGDIPVPTDVVVAGEFSPTASATLKDVSEVTSDDMIFDIGPDSAEALSEILKNAGTIVWNGPVGVFEFDQFGEGTKRIAQAIAE---SDAFSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAVAMLE 387          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_RHOS4 (Phosphoglycerate kinase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=pgk PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.357e-31
Identity = 71/154 (46.10%), Postives = 98/154 (63.64%), Query Frame = -2
Query:  209 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 667
            D  D    ++ KAK+ G ++ LP DVV+A +F A A ++ V   A P   M LD GP  + + SE   + KT+IWNGP+G FE + F A T A A ++A+L+  G + ++ GGGD+VAA+ K G A+  S+IST GGA LE +EGK LPGV AL
Sbjct:  242 DMADTAREILSKAKAAGCTIHLPLDVVVAREFKAGAANETVETAACPADAMILDAGPKTVAALSEVFASAKTLIWNGPLGAFEIEPFDAATNAAALQVAQLTKAGQLISVAGGGDTVAALNKAGAAEGFSYISTAGGAFLEWMEGKELPGVAAL 395          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PSEFS (Phosphoglycerate kinase OS=Pseudomonas fluorescens (strain SBW25) GN=pgk PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.357e-31
Identity = 73/154 (47.40%), Postives = 102/154 (66.23%), Query Frame = -2
Query:  206 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 667
            D LD   ++  K     VS+ LP DVV+A +FA  A + V     + D  M LD+GP    +F+E L  ++TI+WNGP+GVFEFD+F  GT+ +AK +AE S     +I GGGD++AA++K G+AD++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  237 DLLDTARAIAAK-----VSVPLPVDVVVAKEFAESAEATVKLIADVADDDMILDIGPQTAANFAELLKASQTILWNGPVGVFEFDQFGNGTKVLAKAIAESS---AFSIAGGGDTLAAIDKYGVADQISYISTGGGAFLEFVEGKVLPAVEVLE 382          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_COLP3 (Phosphoglycerate kinase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=pgk PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.357e-31
Identity = 69/154 (44.81%), Postives = 103/154 (66.88%), Query Frame = -2
Query:  206 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 667
            D ++  T L ++AK+    + +P+DVV+A +F+A A + + P   +    M  D+GP+  K+ +E +    TI+WNGP+GVFEFD+F  GT+ IA+ +A+ S     +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L+
Sbjct:  237 DLVEEATRLTKQAKANNGDIPVPSDVVVATEFSASATATLKPVNEVTADEMIFDIGPETAKALTEIIANAGTIVWNGPVGVFEFDQFGEGTKVIAQAIADSS---AFSIAGGGDTLAAVDKYEIADKISYISTGGGAFLEFLEGKKLPAVEILE 387          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_SHESM (Phosphoglycerate kinase OS=Shewanella sp. (strain MR-4) GN=pgk PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.773e-31
Identity = 68/153 (44.44%), Postives = 103/153 (67.32%), Query Frame = -2
Query:  209 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 667
            D +D    L+  A+S+G  + +PTDVV+A +F+  A + +     + D  M  D+GPD+ ++ ++ +++  TI+WNGP+GVFEFD+F  GT+ IA+ +A+       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L
Sbjct:  237 DLIDEAKRLVANAQSRGGDIPVPTDVVVAGEFSPTAAATLKAVNEVADSDMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIAD---SKAFSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAVAML 386          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_SILPO (Phosphoglycerate kinase OS=Silicibacter pomeroyi GN=pgk PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.315e-31
Identity = 68/154 (44.16%), Postives = 100/154 (64.94%), Query Frame = -2
Query:  200 DLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 658
            D    ++ KA++ G +++LP+DVV+A+KF + A  +++P    PD  M LD GPD++ +     + ++T+IWNGP+G FE + F A T A A K A L+  G + ++ GGGD+VAA+   G A   ++IST GGA LE +EGKTLPGV AL  A
Sbjct:  244 DTAAEILAKAEAAGCTIVLPSDVVVAEKFESHAPHQILPNDRCPDEGMILDAGPDSLAAIKAIFEKSRTLIWNGPLGAFELEPFDAATNAAALKAAALTRAGKLISVAGGGDTVAALNASGAAGDFTYISTAGGAFLEWMEGKTLPGVAALIQA 397          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_SHESR (Phosphoglycerate kinase OS=Shewanella sp. (strain MR-7) GN=pgk PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.315e-31
Identity = 68/153 (44.44%), Postives = 103/153 (67.32%), Query Frame = -2
Query:  209 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 667
            D +D    L+  A+S+G  + +PTDVV+A +F+  A + +     + D  M  D+GPD+ ++ ++ +++  TI+WNGP+GVFEFD+F  GT+ IA+ +A+       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L
Sbjct:  237 DLIDEAKRLVANAQSRGGDIPVPTDVVVAGEFSPTAAATLKAVNEVGDSDMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIAD---SKAFSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAVAML 386          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_SHESA (Phosphoglycerate kinase OS=Shewanella sp. (strain ANA-3) GN=pgk PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.315e-31
Identity = 68/153 (44.44%), Postives = 103/153 (67.32%), Query Frame = -2
Query:  209 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 667
            D +D    L+  A+S+G  + +PTDVV+A +F+  A + +     + D  M  D+GPD+ ++ ++ +++  TI+WNGP+GVFEFD+F  GT+ IA+ +A+       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L
Sbjct:  237 DLIDEAKRLVANAQSRGGDIPVPTDVVVAGEFSPTAAATLKAVNEVGDSDMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIAD---SKAFSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAVAML 386          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PSEMY (Phosphoglycerate kinase OS=Pseudomonas mendocina (strain ymp) GN=pgk PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.315e-31
Identity = 74/159 (46.54%), Postives = 104/159 (65.41%), Query Frame = -2
Query:  206 LDLGTSLME-------KAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 661
            L +G SL E       KA +  VS+ LP DVV+A  FA DA + V     + D  M LD+GP   + F+E L  ++TI+WNGP+GVFEFD+F  GT+A+A  +AE       +I GGGD++AA++K G+++++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  227 LPVGKSLYEADLVDTAKAIAAKVSVPLPVDVVVAKAFAEDAEATVKSVKDVADDDMILDIGPQTAQQFAEMLKASQTILWNGPVGVFEFDQFGNGTKALALAIAE---SPAFSIAGGGDTLAAIDKYGVSEQISYISTGGGAFLEFVEGKVLPAVEVLE 382          
The following BLAST results are available for this feature:
BLAST of DN621349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_DESDA1.039e-3145.51Phosphoglycerate kinase OS=Desulfovibrio desulfuri... [more]
PGK_SHESH1.357e-3147.26Phosphoglycerate kinase OS=Shewanella sediminis (s... [more]
PGK_RHOS41.357e-3146.10Phosphoglycerate kinase OS=Rhodobacter sphaeroides... [more]
PGK_PSEFS1.357e-3147.40Phosphoglycerate kinase OS=Pseudomonas fluorescens... [more]
PGK_COLP31.357e-3144.81Phosphoglycerate kinase OS=Colwellia psychrerythra... [more]
PGK_SHESM1.773e-3144.44Phosphoglycerate kinase OS=Shewanella sp. (strain ... [more]
PGK_SILPO2.315e-3144.16Phosphoglycerate kinase OS=Silicibacter pomeroyi G... [more]
PGK_SHESR2.315e-3144.44Phosphoglycerate kinase OS=Shewanella sp. (strain ... [more]
PGK_SHESA2.315e-3144.44Phosphoglycerate kinase OS=Shewanella sp. (strain ... [more]
PGK_PSEMY2.315e-3146.54Phosphoglycerate kinase OS=Pseudomonas mendocina (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06J11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621349 ID=DN621349; Name=DN621349; organism=Citrus sinensis; type=EST; length=671bp
TTTTTTTTTTTTTTTTAATCCAGAAAAATGCATCACCATTGATGCCTGTG
AGAAAGAATTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATG
ATAAAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACA
ACTCTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAA
GCATCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTC
TAAGCTGGCTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGAC
CAACCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTC
ACTCCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCC
AGCAGCAAATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGATGA
TGGTTTTAGTAGTATCCAAAGCTTCACTGAATGACTTGATGGCATCAGGT
CCAACATCCAAGCCCATCCAACCATCTGGAATTGCCGTTGCTGGCACCAC
CTTGCTGTTGGCATCAGCAGCAAACTTGTCAGCAATAACAACATCAGTAG
GGAGCAGAAGAGACACCCCTTTAGATTTGGCCTTCTCCATAAGTGACGTA
CCGAGATCAAGCTTGTCTTCC
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