DN621349

Overview
NameDN621349
Unique NameDN621349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PSEAE (Phosphoglycerate kinase OS=Pseudomonas aeruginosa GN=pgk PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.797e-31
Identity = 68/143 (47.55%), Postives = 95/143 (66.43%), Query Frame = -2
Query:  206 KAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 634
            KA +  V + LP DVV+A +FA  A + V     + D  M LD+GP     F+E L T+KTI+WNGP+GVFEFD+F  GT  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  243 KAIAAKVKVPLPVDVVVAKEFAESAVATVKAIAEVADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILE 382          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PSEAB (Phosphoglycerate kinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pgk PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.797e-31
Identity = 68/143 (47.55%), Postives = 95/143 (66.43%), Query Frame = -2
Query:  206 KAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 634
            KA +  V + LP DVV+A +FA  A + V     + D  M LD+GP     F+E L T+KTI+WNGP+GVFEFD+F  GT  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  243 KAIAAKVKVPLPVDVVVAKEFAESAVATVKAIAEVADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILE 382          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PSEA8 (Phosphoglycerate kinase OS=Pseudomonas aeruginosa (strain LESB58) GN=pgk PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.797e-31
Identity = 68/143 (47.55%), Postives = 95/143 (66.43%), Query Frame = -2
Query:  206 KAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 634
            KA +  V + LP DVV+A +FA  A + V     + D  M LD+GP     F+E L T+KTI+WNGP+GVFEFD+F  GT  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  243 KAIAAKVKVPLPVDVVVAKEFAESAVATVKAIAEVADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILE 382          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_MARMS (Phosphoglycerate kinase OS=Marinomonas sp. (strain MWYL1) GN=pgk PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.797e-31
Identity = 74/155 (47.74%), Postives = 101/155 (65.16%), Query Frame = -2
Query:  206 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 670
            ED +    +LM K      S+ LP DVV+A  FA DA + V  A  +    M LD+GP A  +F+  L+ ++TIIWNGP+GVFEFD+F  GT+A+A  +A   G    +I GGGD++AAV+K  +AD++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  236 EDLIPQAKALMAKT-----SIPLPEDVVVATAFAPDAVATVKDAADVGPDDMILDIGPKAAAAFAALLEESQTIIWNGPVGVFEFDQFGGGTKALAMAIANSKG---FSIAGGGDTLAAVDKYDIADQVSYISTGGGAFLEFVEGKVLPAVAMLE 382          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_XANP2 (Phosphoglycerate kinase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=pgk PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.149e-30
Identity = 67/154 (43.51%), Postives = 97/154 (62.99%), Query Frame = -2
Query:  209 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 667
            D  D    ++EKAK+ G  ++LP D V+A +F A+A ++VV    + D  M LD GP+ +   ++ LD  KT++WNGP G FE   F A T A+A+ + + +  G + ++ GGGD+VAA+   G+A   S++ST GGA LE LEGK LPGV AL
Sbjct:  241 DLADTAREILEKAKAAGCEIVLPVDAVVAKEFKANAANRVVSVDEVGDDEMILDAGPETVAVVAQKLDGAKTVVWNGPFGAFEMTPFDAATVAVARDVGKRTRAGTLLSVAGGGDTVAALNHAGVAGDFSYVSTAGGAFLEWLEGKALPGVEAL 394          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_XANOR (Phosphoglycerate kinase OS=Xanthomonas oryzae pv. oryzae GN=pgk PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.149e-30
Identity = 68/153 (44.44%), Postives = 101/153 (66.01%), Query Frame = -2
Query:  209 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 667
            D +     ++  AK++G  + LPTDVV+A +F  DA + V    A+    + LD+GP   + ++E + +  T++WNGP+GVFEF+ F+ GTE +A+ +A  S K   +I GGGD++AAV+K  +A  +++ISTGGGA LE LEGKTLP V AL
Sbjct:  237 DLIPTANQIVADAKTRGAEIPLPTDVVVAKQFLPDAEASVKALDAVDADDLILDIGPQTAQRYAELIASAGTVVWNGPVGVFEFESFSHGTETLARAIA--SSKAF-SIAGGGDTLAAVDKYDIAKDVTYISTGGGAFLEFLEGKTLPAVAAL 386          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_XANOP (Phosphoglycerate kinase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=pgk PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.149e-30
Identity = 68/153 (44.44%), Postives = 101/153 (66.01%), Query Frame = -2
Query:  209 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 667
            D +     ++  AK++G  + LPTDVV+A +F  DA + V    A+    + LD+GP   + ++E + +  T++WNGP+GVFEF+ F+ GTE +A+ +A  S K   +I GGGD++AAV+K  +A  +++ISTGGGA LE LEGKTLP V AL
Sbjct:  237 DLIPTANQIVADAKTRGAEIPLPTDVVVAKQFLPDAEASVKALDAVDADDLILDIGPQTAQRYAELIASAGTVVWNGPVGVFEFESFSHGTETLARAIA--SSKAF-SIAGGGDTLAAVDKYDIAKDVTYISTGGGAFLEFLEGKTLPAVAAL 386          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_XANOM (Phosphoglycerate kinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=pgk PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.149e-30
Identity = 68/153 (44.44%), Postives = 101/153 (66.01%), Query Frame = -2
Query:  209 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 667
            D +     ++  AK++G  + LPTDVV+A +F  DA + V    A+    + LD+GP   + ++E + +  T++WNGP+GVFEF+ F+ GTE +A+ +A  S K   +I GGGD++AAV+K  +A  +++ISTGGGA LE LEGKTLP V AL
Sbjct:  237 DLIPTANQIVADAKTRGAEIPLPTDVVVAKQFLPDAEASVKALDAVDADDLILDIGPQTAQRYAELIASAGTVVWNGPVGVFEFESFSHGTETLARAIA--SSKAF-SIAGGGDTLAAVDKYDIAKDVTYISTGGGAFLEFLEGKTLPAVAAL 386          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_XANAC (Phosphoglycerate kinase OS=Xanthomonas axonopodis pv. citri GN=pgk PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.149e-30
Identity = 68/153 (44.44%), Postives = 101/153 (66.01%), Query Frame = -2
Query:  209 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 667
            D +     ++  AK++G  + LPTDVV+A +F  DA + V    A+    + LD+GP   + ++E + +  T++WNGP+GVFEF+ F+ GTE +A+ +A  S K   +I GGGD++AAV+K  +A  +++ISTGGGA LE LEGKTLP V AL
Sbjct:  237 DLIPTANRIVADAKARGAEIPLPTDVVVAKQFLPDAQASVKSLDAVDADDLILDIGPQTAQRYAELIASAGTVVWNGPVGVFEFESFSHGTETLARAIA--SSKAF-SIAGGGDTLAAVDKYDIAQDVTYISTGGGAFLEFLEGKTLPAVAAL 386          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_ACISJ (Phosphoglycerate kinase OS=Acidovorax sp. (strain JS42) GN=pgk PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.501e-30
Identity = 67/150 (44.67%), Postives = 100/150 (66.67%), Query Frame = -2
Query:  218 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGV 667
            D ++   +++    ++G  + +PTDVV+A  FAADA + V  A+ + +  + LD+GP+     +  L    TI+WNGP+GVFEFD+FA GT+AIA+ +AE S     +I GGGD++AA+ K G+   + +ISTGGGA LE+LEGKTLP +
Sbjct:  242 DLVNEAKAVIAAMAARGAEVPIPTDVVVAKAFAADAPATVKKASEVAEDDLILDIGPETAAQLAAQLKAAGTIVWNGPVGVFEFDQFAGGTKAIAQAIAESS---AFSIAGGGDTLAAIAKYGIEKDVGYISTGGGAFLEVLEGKTLPAI 388          
The following BLAST results are available for this feature:
BLAST of DN621349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PSEAE8.797e-3147.55Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_PSEAB8.797e-3147.55Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_PSEA88.797e-3147.55Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_MARMS8.797e-3147.74Phosphoglycerate kinase OS=Marinomonas sp. (strain... [more]
PGK_XANP21.149e-3043.51Phosphoglycerate kinase OS=Xanthobacter autotrophi... [more]
PGK_XANOR1.149e-3044.44Phosphoglycerate kinase OS=Xanthomonas oryzae pv. ... [more]
PGK_XANOP1.149e-3044.44Phosphoglycerate kinase OS=Xanthomonas oryzae pv. ... [more]
PGK_XANOM1.149e-3044.44Phosphoglycerate kinase OS=Xanthomonas oryzae pv. ... [more]
PGK_XANAC1.149e-3044.44Phosphoglycerate kinase OS=Xanthomonas axonopodis ... [more]
PGK_ACISJ1.501e-3044.67Phosphoglycerate kinase OS=Acidovorax sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06J11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621349 ID=DN621349; Name=DN621349; organism=Citrus sinensis; type=EST; length=671bp
TTTTTTTTTTTTTTTTAATCCAGAAAAATGCATCACCATTGATGCCTGTG
AGAAAGAATTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATG
ATAAAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACA
ACTCTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAA
GCATCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTC
TAAGCTGGCTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGAC
CAACCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTC
ACTCCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCC
AGCAGCAAATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGATGA
TGGTTTTAGTAGTATCCAAAGCTTCACTGAATGACTTGATGGCATCAGGT
CCAACATCCAAGCCCATCCAACCATCTGGAATTGCCGTTGCTGGCACCAC
CTTGCTGTTGGCATCAGCAGCAAACTTGTCAGCAATAACAACATCAGTAG
GGAGCAGAAGAGACACCCCTTTAGATTTGGCCTTCTCCATAAGTGACGTA
CCGAGATCAAGCTTGTCTTCC
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