DN621349

Overview
NameDN621349
Unique NameDN621349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_AERHH (Phosphoglycerate kinase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.447e-30
Identity = 66/148 (44.59%), Postives = 97/148 (65.54%), Query Frame = -2
Query:  206 LMEKAKSKGVSLLLP--TDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 643
            L++ AK       +P  TDVV+  +F+    + +     + DG M  D+GPD+ K+ ++ +   KTI+WNGP+GVFEFD+FA GT+ IA+ +A        +I GGGD++AA++K G+ADK+S+ISTGGGA LE +EGK LP V  L+
Sbjct:  238 LIDTAKKLAAETNIPVTTDVVVGAEFSESTPATIKSVADVTDGDMIFDIGPDSAKALADIIMNAKTILWNGPVGVFEFDQFAEGTKVIAEAIA---ASPAFSIAGGGDTLAAIDKFGIADKVSYISTGGGAFLEFVEGKVLPAVAILE 382          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PSEF5 (Phosphoglycerate kinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.726e-30
Identity = 69/154 (44.81%), Postives = 100/154 (64.94%), Query Frame = -2
Query:  206 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 667
            D LD   ++  K     VS+ LP DVV+A +FA  A + V     + D  M LD+GP     F+E L +++TI+WNGP+GVFEFD+F  GT+ +A+ +A+       +I GGGD++AA++K G+A ++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  237 DLLDTARAIAAK-----VSVPLPVDVVVAKEFAESAAATVKLIADVADDDMILDIGPQTAAQFAELLKSSRTILWNGPVGVFEFDQFGNGTKVLAQAIAD---SAAFSIAGGGDTLAAIDKYGVAQQISYISTGGGAFLEFVEGKVLPAVEVLE 382          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_FRAP2 (Phosphoglycerate kinase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=pgk PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.270e-29
Identity = 67/156 (42.95%), Postives = 100/156 (64.10%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            ED +     ++ KAK  GV++ +P DV +A + + +A + V     + D  M LD+GP + ++ +E L +  TI+WNGP+GVFEFD FA GT+A++  +AE       ++ GGGD++AA+EK  + DK+S+IST GGA LE LEGK LP V  L +
Sbjct:  236 EDLVGEAKDILAKAKELGVNIPVPVDVRVAKELSENAVAVVKNVADVADDEMILDIGPKSERNIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAE---SDAFSVAGGGDTIAAIEKFDIKDKVSYISTAGGAFLEFLEGKKLPAVEILKE 388          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_BDEBA (Phosphoglycerate kinase OS=Bdellovibrio bacteriovorus GN=pgk PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.270e-29
Identity = 68/150 (45.33%), Postives = 93/150 (62.00%), Query Frame = -2
Query:  218 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGV 667
            DKL     ++E+ +++  ++LLP D V        A++ V    AI +  +G+D+GP +IK+FS AL    TI WNGPMG+FE   FA GT  +A+ +A+        I+GGGDS AA E  G A KM+HISTGGGASLE L+G  LPG+
Sbjct:  247 DKLKYAKEMIERIEARNKTILLPVDHVATKGITDTAHAHVTNDVAIAEDELGVDIGPKSIKNFSAALREAGTIFWNGPMGIFENPAFAKGTFGVAQAIAD---SEAIKIVGGGDSAAAAEASGFAGKMTHISTGGGASLEYLQGDKLPGL 393          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_METRJ (Phosphoglycerate kinase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=pgk PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.167e-29
Identity = 66/155 (42.58%), Postives = 93/155 (60.00%), Query Frame = -2
Query:  209 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 670
            +D  +  T ++  A+  G  ++LP D V A +F A A  + VP  A+PD  M LD GP ++   + A+D  KT++WNGP+G FE   F A T A AK  A  +  G + ++ GGGD+VAA+   G+    +++ST GGA LE LEGK LPGV AL
Sbjct:  242 KDLAETATRILAAAEKAGCRIILPVDAVAASEFKARAPHETVPVDAVPDASMILDAGPRSVAEINAAIDGAKTLVWNGPLGAFELAPFDAATVATAKHAAARTKDGQLVSVAGGGDTVAALNHAGVGQDFTYVSTAGGAFLEWLEGKALPGVEAL 396          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_METEP (Phosphoglycerate kinase OS=Methylobacterium extorquens (strain PA1) GN=pgk PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.167e-29
Identity = 68/163 (41.72%), Postives = 99/163 (60.74%), Query Frame = -2
Query:  209 DLGTSLMEK------------AKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 658
            D+G SL EK            AK K  +++LP D ++A +F A+A ++ VP  A+P   M LDVG  +I +   A++  +T++WNGP+G FE   F  GT A+A+  A  +  G + ++ GGGD+VAA+   G+ +  S++ST GGA LE LEGK LPGV AL
Sbjct:  234 DVGKSLCEKDLAETAKRILAAAKEKNCTIILPVDALVAREFKANAENETVPVDAVPSDAMILDVGASSIATIDGAIEEARTLVWNGPLGAFELTPFDTGTVAVAQHAARRTKAGQLVSVAGGGDTVAALNHAGVGEDFSYVSTAGGAFLEWLEGKELPGVEAL 396          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_METC4 (Phosphoglycerate kinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=pgk PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.167e-29
Identity = 68/163 (41.72%), Postives = 99/163 (60.74%), Query Frame = -2
Query:  209 DLGTSLMEK------------AKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 658
            D+G SL EK            AK K  +++LP D ++A +F A+A ++ VP  A+P   M LDVG  +I +   A++  +T++WNGP+G FE   F  GT A+A+  A  +  G + ++ GGGD+VAA+   G+ +  S++ST GGA LE LEGK LPGV AL
Sbjct:  234 DVGKSLCEKDLAETAKRILAAAKEKNCTIILPVDALVAREFRANAENETVPVDAVPSDAMILDVGASSIATIDGAIEEARTLVWNGPLGAFELTPFDTGTVAVAQHAARRTKAGQLVSVAGGGDTVAALNHAGVGEDFSYVSTAGGAFLEWLEGKELPGVEAL 396          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_HERAR (Phosphoglycerate kinase OS=Herminiimonas arsenicoxydans GN=pgk PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.167e-29
Identity = 66/147 (44.90%), Postives = 95/147 (64.63%), Query Frame = -2
Query:  206 SLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 646
            ++M+    +G S+ +P DVV A +F+  A + V     + D  M LD+GP      ++ +    TI+WNGP+GVFEFD+FA GT+ +A  +AE SG    ++ GGGD++AA+ K  +ADK+ +ISTGGGA LE LEGKTLP V  L+
Sbjct:  249 AIMDMMAKRGASVPIPVDVVCAKEFSPTAIATVKDVADVTDDDMILDIGPKTADILAKQISQAGTIVWNGPVGVFEFDQFANGTKTLAHAIAESSG---FSVAGGGDTLAAIAKYDIADKIGYISTGGGAFLEFLEGKTLPAVEILE 392          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_ACIAC (Phosphoglycerate kinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.167e-29
Identity = 67/148 (45.27%), Postives = 95/148 (64.19%), Query Frame = -2
Query:  224 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLP 667
            D +    +++E  K++G  + +PTDVV+A  F+ADA + V  AT + D  + LD+GP      +  L    TI+WNGP+GVFEF  F  GT+AIA+ +AE       +I GGGD++AA+ K G+   + +ISTGGGA LE+LEGKTLP
Sbjct:  242 DLVSEAKAVIEAMKARGAEVPIPTDVVVAKTFSADAPATVKAATDVADDDLILDIGPQTAAKLAAQLKAAGTIVWNGPVGVFEFPAFENGTKAIAQAIAE---SPAFSIAGGGDTLAAIAKYGIEKDVGYISTGGGAFLEVLEGKTLP 386          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_RHOFD (Phosphoglycerate kinase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=pgk PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.830e-29
Identity = 68/148 (45.95%), Postives = 96/148 (64.86%), Query Frame = -2
Query:  224 DKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLP 667
            D L+   +++   K++G ++ +PTDVV A  FAADA + V  AT + D  + LD+GP    + +  L    TI+WNGP+GVFEF  F  GT+ IA  +AE S     +I GGGD++AA+ K G+  ++ +ISTGGGA LE+LEGKTLP
Sbjct:  242 DLLEDARAVIAAMKARGAAVPIPTDVVTAKTFAADAVATVKAATDVADDDLILDIGPQTAAALATQLKAAGTIVWNGPVGVFEFPAFENGTQTIAHAIAESS---AFSIAGGGDTLAAIAKYGIEKQIGYISTGGGAFLEVLEGKTLP 386          
The following BLAST results are available for this feature:
BLAST of DN621349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_AERHH7.447e-3044.59Phosphoglycerate kinase OS=Aeromonas hydrophila su... [more]
PGK_PSEF59.726e-3044.81Phosphoglycerate kinase OS=Pseudomonas fluorescens... [more]
PGK_FRAP21.270e-2942.95Phosphoglycerate kinase OS=Francisella philomiragi... [more]
PGK_BDEBA1.270e-2945.33Phosphoglycerate kinase OS=Bdellovibrio bacteriovo... [more]
PGK_METRJ2.167e-2942.58Phosphoglycerate kinase OS=Methylobacterium radiot... [more]
PGK_METEP2.167e-2941.72Phosphoglycerate kinase OS=Methylobacterium extorq... [more]
PGK_METC42.167e-2941.72Phosphoglycerate kinase OS=Methylobacterium chloro... [more]
PGK_HERAR2.167e-2944.90Phosphoglycerate kinase OS=Herminiimonas arsenicox... [more]
PGK_ACIAC2.167e-2945.27Phosphoglycerate kinase OS=Acidovorax avenae subsp... [more]
PGK_RHOFD2.830e-2945.95Phosphoglycerate kinase OS=Rhodoferax ferrireducen... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06J11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621349 ID=DN621349; Name=DN621349; organism=Citrus sinensis; type=EST; length=671bp
TTTTTTTTTTTTTTTTAATCCAGAAAAATGCATCACCATTGATGCCTGTG
AGAAAGAATTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATG
ATAAAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACA
ACTCTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAA
GCATCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTC
TAAGCTGGCTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGAC
CAACCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTC
ACTCCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCC
AGCAGCAAATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGATGA
TGGTTTTAGTAGTATCCAAAGCTTCACTGAATGACTTGATGGCATCAGGT
CCAACATCCAAGCCCATCCAACCATCTGGAATTGCCGTTGCTGGCACCAC
CTTGCTGTTGGCATCAGCAGCAAACTTGTCAGCAATAACAACATCAGTAG
GGAGCAGAAGAGACACCCCTTTAGATTTGGCCTTCTCCATAAGTGACGTA
CCGAGATCAAGCTTGTCTTCC
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