DN621349

Overview
NameDN621349
Unique NameDN621349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_LACSS (Phosphoglycerate kinase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=pgk PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.183e-43
Identity = 91/156 (58.33%), Postives = 112/156 (71.79%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            EDK++L   L+EKA  K   L+LP D V+AD F+ DA ++ V    IPDG+M LD+GP AI  F   L   KT++WNGPMGVFE D FA GT AI + L  LSG   TTI+GGGDS AAV+K+G+ DK++HISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  254 EDKIELAKELIEKAGDK---LVLPVDNVVADAFSNDAKTETVEGN-IPDGYMALDIGPKAIADFENVLKDAKTVVWNGPMGVFEMDNFAKGTLAIGEFLGNLSG--ATTIVGGGDSTAAVKKLGVGDKLTHISTGGGASLEYLEGKTLPGIAAISD 403          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_PROVI (Phosphoglycerate kinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=pgk PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.546e-43
Identity = 87/156 (55.77%), Postives = 114/156 (73.08%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            ++KL+L  SL+E+AK++ + LLLP DV+ A + +ADA    V    +  G MGLD+GP  I+++ + +   +TI+WNGPMGVFE D FA GT A+A+ +A  + KG TTIIGGGDS AAV K GLA KM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  242 DNKLELALSLLEQAKNRNIKLLLPQDVIAAPELSADAPFHAVSVKELEAGEMGLDIGPLTIEAYRQEILGARTILWNGPMGVFEIDSFANGTFAVAEAMALATAKGATTIIGGGDSAAAVAKAGLASKMTHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_RHOSR (Phosphoglycerate kinase OS=Rhodococcus sp. (strain RHA1) GN=pgk PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.019e-43
Identity = 81/134 (60.45%), Postives = 104/134 (77.61%), Query Frame = -2
Query:  206 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLALD 604
            +P DVVIAD F+ADA SK+V    IPDGWMGLD+GP +++ F+  L + KT+ WNGPMGVFEF+KFAAGT+ +A+ + E +GKG  +++GGGDS AAV ++GL  D  SHISTGGGASLE LEGK LPG+  L+
Sbjct:  269 IPQDVVIADSFSADAESKIVSVLEIPDGWMGLDIGPQSVRRFAAILTSAKTVFWNGPMGVFEFEKFAAGTKGVAEAIIEATGKGAYSVVGGGDSAAAVRQLGLPEDGFSHISTGGGASLEYLEGKELPGIAVLE 402          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_OCEIH (Phosphoglycerate kinase OS=Oceanobacillus iheyensis GN=pgk PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.019e-43
Identity = 84/156 (53.85%), Postives = 110/156 (70.51%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            EDK+DL    M KAK KGV+ +LP D ++AD F+ +AN+K+V    IP  W  LD+G    + +S  +  +K +IWNGPMGVFE + FA GT+A+A+ LA   G    +IIGGGDS AAVEK GLA++M H+STGGGASLE +EGK LPG+ AL+D
Sbjct:  240 EDKIDLAKEFMNKAKEKGVNFVLPVDAIVADDFSEEANTKIVDIDKIPSDWEALDIGTKTREKYSSIVKDSKLVIWNGPMGVFELNAFAGGTKAVAEALASTEG---YSIIGGGDSAAAVEKFGLAEEMDHVSTGGGASLEFMEGKVLPGLAALND 392          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_CHLPD (Phosphoglycerate kinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=pgk PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.019e-43
Identity = 82/156 (52.56%), Postives = 114/156 (73.08%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            ++KLDL  +L+++A  KG++LLLP DV++A   ++DA+S V    ++ DG +G+D+GP  I+ +   +   +T++WNGPMGVFE D FA GT AIAK LAE +  G  TI+GGGDS AA+ K  L+D ++HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  242 DNKLDLAQALLKQAADKGINLLLPDDVLVAATISSDASSHVEAVNSMSDGMIGVDIGPKTIEKYRNEILAARTVLWNGPMGVFEIDNFAEGTFAIAKALAEATSSGAITIVGGGDSAAAIAKAALSDSITHISTGGGASLEFLEGKALPGIEALND 397          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_YEAST (Phosphoglycerate kinase OS=Saccharomyces cerevisiae GN=PGK1 PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 2.637e-43
Identity = 86/148 (58.11%), Postives = 109/148 (73.65%), Query Frame = -2
Query:  203 LMEKAKSKGVSLLLPTDVVIADKFAADANSKVVP-ATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 643
            LMEKAK+KGV ++LP D +IAD F+ADAN+K V     IP GW GLD GP++ K F+  +   KTI+WNGP GVFEF+KFAAGT+A+  ++ + S  G T IIGGGD+    +K G+ DK+SH+STGGGASLELLEGK LPGV  L +
Sbjct:  267 LMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKEGIPAGWQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPGVAFLSE 414          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_THEM4 (Phosphoglycerate kinase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=pgk PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.637e-43
Identity = 83/155 (53.55%), Postives = 108/155 (69.68%), Query Frame = -2
Query:  209 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 670
            EDKLDL   ++E+AK KGV  +LP D V A K  +   +K       IP+GWMGLD+GP++IK F E +   KTI+WNGPMGVFE + F  GT+ +A  +A  + KG TT+IGGGDS AA+ K  L +K+SH+STGGGASLE LEGK LPG+ ++
Sbjct:  240 EDKLDLAKRILEEAKEKGVEFVLPVDAVCAQKIESGVETKTFRINDGIPEGWMGLDIGPESIKLFKEKISGAKTIVWNGPMGVFEIEDFETGTKEVAISIAAETEKGATTVIGGGDSAAAIAKFNLKNKVSHVSTGGGASLEFLEGKELPGIASI 394          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_SCHMA (Phosphoglycerate kinase OS=Schistosoma mansoni GN=PGK PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.637e-43
Identity = 86/149 (57.72%), Postives = 108/149 (72.48%), Query Frame = -2
Query:  200 LMEKAKSKGVSLLLPTDVVIADKFAADANSKV-VPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 643
            +ME AK+K V++ LP D V ADKFA DAN+++    + I DGWMGLD+GP  I+ FS+ +   KTI+WNGPMGVFE DKFA GT+A   ++ + +  G TTIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV+AL DA
Sbjct:  267 VMETAKAKNVAIHLPVDFVTADKFADDANTEIRTIQSGIADGWMGLDIGPKTIEEFSKVISRAKTIVWNGPMGVFEMDKFATGTKAAMDEVVKATKNGATTIIGGGDTATCCAKWDTEDKVSHVSTGGGASLELLEGKQLPGVVALTDA 415          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_CLOB6 (Phosphoglycerate kinase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=pgk PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.637e-43
Identity = 87/156 (55.77%), Postives = 111/156 (71.15%), Query Frame = -2
Query:  203 EDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 670
            EDK++    +++KAK KGV+LLLP D V+ADKF  DA+  V     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  D M+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  245 EDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDNMTHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of DN621349 vs. ExPASy Swiss-Prot
Match: PGK_CANGA (Phosphoglycerate kinase OS=Candida glabrata GN=PGK1 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.637e-43
Identity = 86/148 (58.11%), Postives = 110/148 (74.32%), Query Frame = -2
Query:  203 LMEKAKSKGVSLLLPTDVVIADKFAADANSKVVP-ATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 643
            LMEKAK+KGV ++LP D VIAD F+ADAN+K+V     IP GW GLD GP++ K F+  +   KTI+WNGP GVFEF+KFA+GT+A+  ++ + S  G T IIGGGD+    +K G+ DK+SH+STGGGASLELLEGK LPGV  L +
Sbjct:  267 LMEKAKAKGVEVVLPVDFVIADAFSADANTKIVSDKEGIPAGWQGLDNGPESRKLFAATIAKAKTIVWNGPPGVFEFEKFASGTKAMLDEVVKSSTSGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPGVAFLSE 414          
The following BLAST results are available for this feature:
BLAST of DN621349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_LACSS1.183e-4358.33Phosphoglycerate kinase OS=Lactobacillus sakei sub... [more]
PGK_PROVI1.546e-4355.77Phosphoglycerate kinase OS=Prosthecochloris vibrio... [more]
PGK_RHOSR2.019e-4360.45Phosphoglycerate kinase OS=Rhodococcus sp. (strain... [more]
PGK_OCEIH2.019e-4353.85Phosphoglycerate kinase OS=Oceanobacillus iheyensi... [more]
PGK_CHLPD2.019e-4352.56Phosphoglycerate kinase OS=Chlorobium phaeobactero... [more]
PGK_YEAST2.637e-4358.11Phosphoglycerate kinase OS=Saccharomyces cerevisia... [more]
PGK_THEM42.637e-4353.55Phosphoglycerate kinase OS=Thermosipho melanesiens... [more]
PGK_SCHMA2.637e-4357.72Phosphoglycerate kinase OS=Schistosoma mansoni GN=... [more]
PGK_CLOB62.637e-4355.77Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CANGA2.637e-4358.11Phosphoglycerate kinase OS=Candida glabrata GN=PGK... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06J11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621349 ID=DN621349; Name=DN621349; organism=Citrus sinensis; type=EST; length=671bp
TTTTTTTTTTTTTTTTAATCCAGAAAAATGCATCACCATTGATGCCTGTG
AGAAAGAATTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATG
ATAAAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACA
ACTCTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAA
GCATCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTC
TAAGCTGGCTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGAC
CAACCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTC
ACTCCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCC
AGCAGCAAATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGATGA
TGGTTTTAGTAGTATCCAAAGCTTCACTGAATGACTTGATGGCATCAGGT
CCAACATCCAAGCCCATCCAACCATCTGGAATTGCCGTTGCTGGCACCAC
CTTGCTGTTGGCATCAGCAGCAAACTTGTCAGCAATAACAACATCAGTAG
GGAGCAGAAGAGACACCCCTTTAGATTTGGCCTTCTCCATAAGTGACGTA
CCGAGATCAAGCTTGTCTTCC
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