DN621336

Overview
NameDN621336
Unique NameDN621336
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621336 vs. ExPASy Swiss-Prot
Match: CP4D1_DROSI (Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4d1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 56/197 (28.43%), Postives = 88/197 (44.67%), Query Frame = -2
Query:  138 GTDTTSTALQWIMANLVKHPHVQETVYTEIR--XXXXXXXXXXXXELQKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFVLDDKYVIPKDGSVNFMVAEMGWDPKVWEDPMGFKPERFLNDHDQDFDITGSRE----IKMMPFGAGRRICPGFGLAMLHLEYFVANLVWNFEWTAVDGDEVDLTEKQEFTVVMKNPL 710
            G DTTS+AL +   N+  HP  Q+  + EIR               L ++ Y+   + E LR +P    +L   V ED  ++ K +IP   ++      +G   +++ +P  FKPER        FD+  + E       +PF AG R C G   AML ++  VAN++ ++E   V           E  +  K+PL
Sbjct:  317 GHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVP-LLGRKVLEDCEINGK-LIPAGTNIGISPLYLGRREELFSEPNSFKPER--------FDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKDPL 503          
BLAST of DN621336 vs. ExPASy Swiss-Prot
Match: CP4AP_PIG (Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 47/166 (28.31%), Postives = 69/166 (41.57%), Query Frame = -2
Query:  213 GTDTTSTALQWIMANLVKHPHVQETVYTEIRXXXXXXXXXXXXELQKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFVLDDKYVIPKDGSVNFMVAEMGWDPKVWEDPMGFKPERFLNDHDQDFDITGSREIKMMPFGAGRRICPGFGLAMLHLEYFVANLVWNFE 710
            G DTT++ + WI+  L  HP  Q+    EI+             L +MPY    I E LR +PP   V    +++     D   +P    ++  V  +  +P+VW +P  F P RF          +       MPF  G R C G   AM  ++  VA  +  FE
Sbjct:  316 GHDTTASGISWILYALASHPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPGV-SRELSKPITFPDGRSLPAGIILSLSVYSLHHNPQVWPNPEEFDPSRFAPG-------SARHSHAFMPFSGGSRNCIGKQFAMNEMKVAVALTLLRFE 473          
BLAST of DN621336 vs. ExPASy Swiss-Prot
Match: CP4AO_PIG (Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 46/166 (27.71%), Postives = 70/166 (42.17%), Query Frame = -2
Query:  213 GTDTTSTALQWIMANLVKHPHVQETVYTEIRXXXXXXXXXXXXELQKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFVLDDKYVIPKDGSVNFMVAEMGWDPKVWEDPMGFKPERFLNDHDQDFDITGSREIKMMPFGAGRRICPGFGLAMLHLEYFVANLVWNFE 710
            G DTT++ + WI+  L  HP  Q+    EI+             L +MPY    I E LR +PP   V    +++     D   +P   +++  +  +  +P+VW +P  F P RF          +       MPF  G R C G   AM  ++  VA  +  FE
Sbjct:  316 GHDTTASGISWILYALASHPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPGV-SRELSKPITFPDGRSLPAGITLSLSIYGLHHNPQVWPNPEEFDPSRFAPG-------SARHSHAFMPFSGGSRNCIGKQFAMNEMKVAVALTLLRFE 473          
BLAST of DN621336 vs. ExPASy Swiss-Prot
Match: CP4A7_RABIT (Cytochrome P450 4A7 OS=Oryctolagus cuniculus GN=CYP4A7 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 49/166 (29.52%), Postives = 66/166 (39.76%), Query Frame = -2
Query:  213 GTDTTSTALQWIMANLVKHPHVQETVYTEIRXXXXXXXXXXXXELQKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFVLDDKYVIPKDGSVNFMVAEMGWDPKVWEDPMGFKPERFLNDHDQDFDITGSREIKMMPFGAGRRICPGFGLAMLHLEYFVANLVWNFE 710
            G DTT++ + WI   L  HP  Q     EI+             L KMPY    I E LR +PP   V    ++      D   +PK   +   +  +  +PKVW +P  F P RF          +       +PF  G R C G   AM  L+  VA  +  FE
Sbjct:  323 GHDTTASGISWIFYALATHPEHQHRCREEIQGLLGDGASITWEHLDKMPYTTMCIKEALRLYPPVPGV-GSKLSSPVTFPDGRSLPKGIIITLSIYGLHHNPKVWPNPEVFDPSRFAPG-------SARHSHAFLPFSGGSRNCIGKQFAMNELKVAVALTLVRFE 480          
BLAST of DN621336 vs. ExPASy Swiss-Prot
Match: C85A3_SOLLC (Cytochrome P450 85A3 OS=Solanum lycopersicum GN=CYP85A3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 52/181 (28.73%), Postives = 78/181 (43.09%), Query Frame = -2
Query:  186 GTDTTSTALQWIMANLVKHPHVQETVYTE---IRXXXXXXXXXXXXELQKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFVLDDKYVIPKDGSVNFMVAEMGWDPKVWEDPMGFKPERFLN---DHDQDFDITGSREIKMMPFGAGRRICPGFGLAMLHLEYFVANLVWNFEWTAVDGDEV 710
            G +T ST     +  L  HP   E +  E   IR            + + M + +AVI E LR     + VL    T+D  L+  Y+IPK   +     E+ +DP ++ DP  F P R+L    DH   F          + FG G R+CPG  L +  +  F+   V  + W  V G+++
Sbjct:  280 GFETVSTTSMMAVKYLHDHPKALEEIRKEHFAIREKKSLEDPIDYNDFKAMRFTRAVIYETLRLATIVNGVL-RKTTQDMELNG-YMIPKGWRIYVYTRELNYDPLIYPDPYTFNPWRWLENNLDHQSSF----------LMFGGGTRLCPGKELGVAEISTFLHYFVTRYRWEEVGGNKL 448          
BLAST of DN621336 vs. ExPASy Swiss-Prot
Match: C4AE1_DROME (Cytochrome P450 4ae1 OS=Drosophila melanogaster GN=Cyp4ae1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 47/175 (26.86%), Postives = 86/175 (49.14%), Query Frame = -2
Query:  192 GTDTTSTALQWIMANLVKHPHVQETVYTEIR--XXXXXXXXXXXXELQKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFVLDDKYVIPKDGSVNFMVAEMGWDPKVWEDPMGFKPERFLNDHDQDFDITGSREIKMMPFGAGRRICPGFGLAMLHLEYFVANLVWNFEWTAVDGD 710
            G DTT++A+ + +  L +H  VQ+ ++ E+R              +   +PYL  V+ E LR +PP   V    + +D V+D+ Y IP   +V  ++ ++  D  ++ DP+ F+PER L +     +         +PF AG R C G   A+L ++  V  ++ +++   +  D
Sbjct:  305 GHDTTTSAVSFCLYLLSRHEAVQQKLFEELRMHYGQDLFRGVILSDFATLPYLSCVVKESLRLYPPIPAV-ARCLEKDLVIDEGY-IPVGTNVVVLLWQLLRDEAIFTDPLVFQPERHLGE-----EAPRLSPYSYIPFSAGPRNCIGQKFALLEMKTMVTKVIRHYQLLPMGAD 472          
The following BLAST results are available for this feature:
BLAST of DN621336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 456
Match NameE-valueIdentityDescription
CP4D1_DROSI8.658e-1128.43Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4... [more]
CP4AP_PIG8.658e-1128.31Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2... [more]
CP4AO_PIG8.658e-1127.71Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2... [more]
CP4A7_RABIT8.658e-1129.52Cytochrome P450 4A7 OS=Oryctolagus cuniculus GN=CY... [more]
C85A3_SOLLC8.658e-1128.73Cytochrome P450 85A3 OS=Solanum lycopersicum GN=CY... [more]
C4AE1_DROME8.658e-1126.86Cytochrome P450 4ae1 OS=Drosophila melanogaster GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06J05_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621336 ID=DN621336; Name=DN621336; organism=Citrus sinensis; type=EST; length=711bp
TTTTTTTTTTTTTTGGTAATATAATTATGCCAATATTAATATAGAAGTCT
TACTTAATTTTTAAATGCATAATAATACTAATAATAATAATCAGGTGAGT
TATGTTCTTATCTAGTTCTAGGAGAAAGAAGAGCCTGCAATGGATTCTTC
ATCACAACGGTAAACTCTTGCTTCTCAGTCAAATCAACCTCATCACCATC
CACAGCCGTCCACTCAAAATTCCAAACCAAATTAGCCACAAAATACTCCA
AATGAAGCATAGCCAAACCAAAACCGGGACAGATTCTCCTGCCAGCTCCA
AATGGCATCATCTTAATTTCCCTACTCCCCGTTATGTCAAAATCTTGATC
ATGATCATTCAAAAACCTCTCGGGCTTAAACCCCATCGGATCCTCCCAAA
CTTTCGGATCCCAACCCATTTCGGCCACCATGAAATTCACACTCCCGTCC
TTTGGTATCACATACTTATCATCAAGAACGAAATCCTCTGTCACGGCATG
TGGCAACACGAAATGCCCAGGCGGGTGCCTCCTCAGTCCCTCTAAAATCA
CTGCTTTCAGATACGGCATCTTCTGCAACTCCTCCTCTTTCACCTCTTCA
TTTTCACCAACAACTCCTCTGATTTCCGTATAAACCGTCTCTTGAACGTG
CGGGTGCTTCACCAGATTGGCCATGATCCACTGTAGCGCCGTGGAGGTAG
TGTCAGTGCCC
back to top