DN621335

Overview
NameDN621335
Unique NameDN621335
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621335 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.564e-13
Identity = 38/94 (40.43%), Postives = 56/94 (59.57%), Query Frame = -2
Query:  402 KSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXLCVQYEAEFRPNMSIVVKALQPLL 683
            KSDV+SFGVVLLE+++GR+P++   PR + SLV WA P +   KV + VDP +KG Y              C++  + +RP M  +V+ L+  L
Sbjct:  778 KSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDAL 871          
BLAST of DN621335 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13
Identity = 38/94 (40.43%), Postives = 56/94 (59.57%), Query Frame = -2
Query:  402 KSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXLCVQYEAEFRPNMSIVVKALQPLL 683
            KSDV+SFGVVLLE+++GR+P++   PR + SLV WA P +   KV + VDP +KG Y              C++  + +RP M  +V+ L+  L
Sbjct:  779 KSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDAL 872          
BLAST of DN621335 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12
Identity = 38/92 (41.30%), Postives = 56/92 (60.87%), Query Frame = -2
Query:  411 KSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLS-EDKVKQCVDPKLKGEYXXXXXXXXXXXXXLCVQYEAEFRPNMSIVVKALQ 683
            KSDV++FGVVLLE++TG    +   PRGQ+SLV W  P LS + +VKQ +D  +KG+Y              C++ + + RP+M  VV+ L+
Sbjct:  275 KSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVLE 366          
BLAST of DN621335 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12
Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = -2
Query:  405 KSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSED-KVKQCVDPKLKGEYXXXXXXXXXXXXXLCVQYEAEFRPNMSIVVKALQPL 683
            KSDVYSFGVVLLEL++GR+ +D++    + SLV WATP L +  K+ + +D KL G+Y              C+  +A+ RP MS V+  L+ L
Sbjct:  276 KSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAKLRPKMSEVLVTLEQL 369          
BLAST of DN621335 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11
Identity = 36/91 (39.56%), Postives = 50/91 (54.95%), Query Frame = -2
Query:  411 KSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXLCVQYEAEFRPNMSIVVKALQ 683
            KSD+YSFGV+LLE +TGR PVD+  P  + +LV W    +   + ++ VDP+L+                 CV  EAE RP MS V + L+
Sbjct:  365 KSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLE 455          
BLAST of DN621335 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.144e-11
Identity = 30/91 (32.97%), Postives = 51/91 (56.04%), Query Frame = -2
Query:  411 KSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXLCVQYEAEFRPNMSIVVKALQ 683
            KSD+YSFG++++E++TGR PVD++ P+G+ +LV W    +   + ++ VDPK+                  CV  +A  RP M  ++  L+
Sbjct:  336 KSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHMLE 426          
The following BLAST results are available for this feature:
BLAST of DN621335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
NORK_PEA6.564e-1340.43Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
NORK_MEDTR8.573e-1340.43Nodulation receptor kinase OS=Medicago truncatula ... [more]
CX32_ARATH2.494e-1241.30Probable serine/threonine-protein kinase Cx32, chl... [more]
APK2A_ARATH2.494e-1242.55Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y2296_ARATH2.112e-1139.56Probable receptor-like protein kinase At2g42960 OS... [more]
Y1154_ARATH6.144e-1132.97Probable serine/threonine-protein kinase At1g01540... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06J04_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621335 ID=DN621335; Name=DN621335; organism=Citrus sinensis; type=EST; length=684bp
TTTTTAATAAAATCAAATCAAATAAACAATATAAGTTGAGTCCAGAGAGA
AAAGAAATCAAACAAATACTCAGAACAAATATATCCACCACACAACCCAA
TCCAATTGTTAACTTAAAAACCCAAGGCCGACAGTACCATGGTGTCATAC
CAGTTGCAGACATTTTAAGTATCGACGACACTTCGGTACAAATCCAATCC
TAAAAATCTGCTCTCTTATACGAAATCAAATCTCATATACGAAAAATTAA
AAAAATATATATATATAAAAGTGATTTGCAGAAATATGGAGGCATATGAA
ACAAACTGTAACCAAGCTGCAAGAAACTTCAAGCTAGCAGCGGAACTAAA
TTCTTTTGCCTTTTAAGTCTCTGAAACTGGGGCTGCTGGAGGGGGAGATT
TCAGAAGAGGTTGAAGAGCCTTGACAACAATGCTCATATTTGGCCGGAAT
TCCGCTTCATACTGCACACATAATGCTGCTACTGCAGCCAACTTAGCAAC
TCCTTTGGGTGGATATTCACCCTTAAGCTTTGGGTCTACACATTGCTTAA
CTTTGTCTTCACTCAATCTTGGAGTAGCCCAGGTAACAAGACTCTGTTGT
CCACGAGGCATGGTGTGATCAACAGGTTTCCTCCCAGTAAGGAGCTCTAG
AAGGACAACCCCAAAGCTATACACGTCACTTTTC
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