EY720295

Overview
NameEY720295
Unique NameEY720295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E_BOVIN (Eukaryotic translation initiation factor 4E OS=Bos taurus GN=EIF4E PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 9.005e-27
Identity = 62/184 (33.70%), Postives = 99/184 (53.80%), Query Frame = 3
Query:  234 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPH-DASLRGYSSYRNTWL 767
            HPL+N++  W+ +         +++ N++ I  F TVE FW  Y H+   S L    D  LFK+GI P+WED  N  GG+W+I   K        RFW + VL L+G+   DY D++CGAV+++R   D +++W     + +AV  +    K  L LP   V+ Y+ H D + +  S+ +N ++
Sbjct:   37 HPLQNRWALWFFKNDKS----KTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETVLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFV 216          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: I4E1B_MOUSE (Eukaryotic translation initiation factor 4E type 1B OS=Mus musculus GN=Eif4e1b PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.176e-26
Identity = 61/189 (32.28%), Postives = 99/189 (52.38%), Query Frame = 3
Query:  171 SVDNNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPH 722
            S+    + A      E+ + LHPL+ ++V W+ +         +++DN++ +  F+TVE FW  Y H+   S L S  D  LFKEGI P+WED+ N  GG+W++   K +      R W + +L LVG+   +Y   +CGAV++IR   D +++W   A D   VM +    K  L +    ++ Y+ H
Sbjct:   44 SLKTQRRKAHREHPPEVLSKLHPLQYRWVLWFFKND----RSRAWQDNLQLVTKFNTVEDFWAVYSHIKLASKLSSGCDYALFKEGILPMWEDNRNKQGGRWLLSIDKQLRHFELDRLWLETLLCLVGNCFEEYSREVCGAVVNIRTKRDKIALWTSEAEDKAGVMQIGQIYKERLGISTKTIIGYQAH 228          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E1_ORYSJ (Eukaryotic translation initiation factor 4E-1 OS=Oryza sativa subsp. japonica GN=Os01g0970400 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.536e-26
Identity = 63/177 (35.59%), Postives = 94/177 (53.11%), Query Frame = 3
Query:  192 DAEERQARELK-------------ANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHL 683
            DA+ER+  E+              A  HPL++ + FW+     G   Q ++  +I+ I  FSTVE FW  Y ++  PS L    D H FK  I P WED    NGGKW     +  S   W   +LA++G+Q DYGD ICGAV+S+R  ++ +++W +NA++  A +++    K  L
Sbjct:   25 DADEREEGEIADDDSGHAPPQANPAAPHPLEHAWTFWFDN-PQGKSKQATWGSSIRPIHTFSTVEDFWSLYNNIHHPSKLVVGADFHCFKNKIEPKWEDPICANGGKWTFSCGRGKSDTMWLHTLLAMIGEQFDYGDEICGAVVSVRGKQERIAIWTKNAANEAAQISIGKQWKEFL 200          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E_HUMAN (Eukaryotic translation initiation factor 4E OS=Homo sapiens GN=EIF4E PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.006e-26
Identity = 61/184 (33.15%), Postives = 99/184 (53.80%), Query Frame = 3
Query:  234 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPH-DASLRGYSSYRNTWL 767
            HPL+N++  W+ +         +++ N++ I  F TVE FW  Y H+   S L    D  LFK+GI P+WED  N  GG+W+I   K        RFW + +L L+G+   DY D++CGAV+++R   D +++W     + +AV  +    K  L LP   V+ Y+ H D + +  S+ +N ++
Sbjct:   37 HPLQNRWALWFFKNDKS----KTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFV 216          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E1_MAIZE (Eukaryotic translation initiation factor 4E-1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.620e-26
Identity = 56/142 (39.44%), Postives = 85/142 (59.86%), Query Frame = 3
Query:  234 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMAL 659
            HPL++ + FW+       + Q ++  +I+ I  FSTVE FW  Y ++  PS L    D H FK  I P WED    NGGKW I   +  S  FW   +LA++G+Q DYGD ICGAV+S+R  ++ +++W +NA++  A +++
Sbjct:   43 HPLEHSWTFWFDNPQSKSK-QAAWGSSIRPIHTFSTVEEFWGLYNNINHPSKLIVGADFHCFKNKIEPKWEDPICANGGKWTISCGRGKSDTFWLHTLLAMIGEQFDYGDEICGAVVSVRGKQERIAIWTKNAANEAAQVSI 183          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E_RAT (Eukaryotic translation initiation factor 4E OS=Rattus norvegicus GN=Eif4e PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.422e-26
Identity = 61/184 (33.15%), Postives = 98/184 (53.26%), Query Frame = 3
Query:  234 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPH-DASLRGYSSYRNTWL 767
            HPL+N++  W+ +         +++ N++ I  F TVE FW  Y H+   S L    D  LFK+GI P+WED  N  GG+W+I   K        RFW + +L L+G+   DY D++CGAV+++R   D +++W     +  AV  +    K  L LP   V+ Y+ H D + +  S+ +N ++
Sbjct:   37 HPLQNRWALWFFKNDKS----KTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFV 216          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E_RABIT (Eukaryotic translation initiation factor 4E OS=Oryctolagus cuniculus GN=EIF4E PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.422e-26
Identity = 61/184 (33.15%), Postives = 98/184 (53.26%), Query Frame = 3
Query:  234 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPH-DASLRGYSSYRNTWL 767
            HPL+N++  W+ +         +++ N++ I  F TVE FW  Y H+   S L    D  LFK+GI P+WED  N  GG+W+I   K        RFW + +L L+G+   DY D++CGAV+++R   D +++W     +  AV  +    K  L LP   V+ Y+ H D + +  S+ +N ++
Sbjct:   37 HPLQNRWALWFFKNDKS----KTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFV 216          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E_MOUSE (Eukaryotic translation initiation factor 4E OS=Mus musculus GN=Eif4e PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.422e-26
Identity = 61/184 (33.15%), Postives = 98/184 (53.26%), Query Frame = 3
Query:  234 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPH-DASLRGYSSYRNTWL 767
            HPL+N++  W+ +         +++ N++ I  F TVE FW  Y H+   S L    D  LFK+GI P+WED  N  GG+W+I   K        RFW + +L L+G+   DY D++CGAV+++R   D +++W     +  AV  +    K  L LP   V+ Y+ H D + +  S+ +N ++
Sbjct:   37 HPLQNRWALWFFKNDKS----KTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFV 216          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4EA_DANRE (Eukaryotic translation initiation factor 4E-1A OS=Danio rerio GN=eif4e1a PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.422e-26
Identity = 64/211 (30.33%), Postives = 111/211 (52.61%), Query Frame = 3
Query:  153 TQTVADSVDNNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKK----VVSGRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPH-DASLRGYSSYRNTWL 767
            T T   + +  N++ E++         HPL+N++  W+ +         +++ N++ I  F TVE FW  Y H+   S L S  D  LFK+GI P+WED  N  GG+W+I   K        RFW + +L LVG+   D+ D++CGAV++IR   D +++W  +  +  A++ +    K  L +P   ++ Y+ H D + +  S+ +N ++
Sbjct:    8 TSTNPSNSEEKNEENEQQIVSLEDYIKHPLQNRWALWFFKNDKS----KTWQANLRLISKFDTVEDFWALYNHIQLSSNLMSGCDYSLFKDGIEPMWEDERNKRGGRWLITLSKQQRRADLDRFWLETLLCLVGEAFDDHSDDVCGAVVNIRTKGDKIAIWTTDYENKDAIVHIGRVYKERLGVPPKVIIGYQSHADTATKSGSTTKNKFV 214          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E_XENLA (Eukaryotic translation initiation factor 4E OS=Xenopus laevis GN=eif4e PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.300e-25
Identity = 60/184 (32.61%), Postives = 99/184 (53.80%), Query Frame = 3
Query:  234 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQLD-YGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPH-DASLRGYSSYRNTWL 767
            HPL+N++  W+ +         +++ N++ I  F TVE FW  Y H+   S L S  D  LFK+GI P+WED  N  GG+W+I   K        RFW + ++ L+G+  D + D++CGAV+++R   D +++W     +  AV  +    K  L LP   V+ Y+ H D + +  S+ +N ++
Sbjct:   33 HPLQNRWALWFFKNDKS----KTWQANLRLISKFDTVEDFWALYNHIQLSSNLMSGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRNDLDRFWLETLMCLIGESFDEHSDDVCGAVVNVRAKGDKIAIWTTEFENKDAVTHIGRVYKERLGLPAKVVIGYQSHADTATKSGSTTKNRFV 212          
The following BLAST results are available for this feature:
BLAST of EY720295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
IF4E_BOVIN9.005e-2733.70Eukaryotic translation initiation factor 4E OS=Bos... [more]
I4E1B_MOUSE1.176e-2632.28Eukaryotic translation initiation factor 4E type 1... [more]
IF4E1_ORYSJ1.536e-2635.59Eukaryotic translation initiation factor 4E-1 OS=O... [more]
IF4E_HUMAN2.006e-2633.15Eukaryotic translation initiation factor 4E OS=Hom... [more]
IF4E1_MAIZE2.620e-2639.44Eukaryotic translation initiation factor 4E-1 OS=Z... [more]
IF4E_RAT3.422e-2633.15Eukaryotic translation initiation factor 4E OS=Rat... [more]
IF4E_RABIT3.422e-2633.15Eukaryotic translation initiation factor 4E OS=Ory... [more]
IF4E_MOUSE3.422e-2633.15Eukaryotic translation initiation factor 4E OS=Mus... [more]
IF4EA_DANRE3.422e-2630.33Eukaryotic translation initiation factor 4E-1A OS=... [more]
IF4E_XENLA1.300e-2532.61Eukaryotic translation initiation factor 4E OS=Xen... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-004-E10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720295 ID=EY720295; Name=EY720295; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGCCCACGCGTCCGTCTTCACTTCCCTTGTTTGGTTAAAAG
TGAGAAAATTAGGGCTTGAGGTGAAGAAGAACAAAATTTTAAAAAGAAAA
AGAAAATCAATAAATGGAAATAACAGATAAGAAGGAATCCGATATCAATA
ACACACAAACAGTCGCCGATTCCGTCGATAACAATAACAAAGACGCCGAA
GAACGCCAAGCTCGTGAACTTAAAGCCAATTTGCATCCTCTTAAGAACAA
GTTTGTCTTTTGGTACACTCGTCGAACACCTGGAGTTCGAACTCAAACAT
CCTATGAGGACAACATAAAGAAAATTGTGGACTTCAGTACTGTTGAAGGC
TTTTGGGTCTGCTATTGCCACTTGGCTCGTCCTTCTTTGTTGCCAAGCCC
TACAGATTTGCATCTTTTCAAGGAAGGAATTCGCCCATTATGGGAGGACT
CTGCAAATTGCAATGGCGGTAAATGGATAATAAGGTTCAAGAAAGTTGTA
TCAGGTCGCTTTTGGGAAGATCTGGTTCTTGCCTTGGTGGGTGACCAGCT
TGACTATGGTGATAACATATGTGGTGCAGTCCTAAGCATTCGATTCAATG
AAGATATATTGAGTGTGTGGAACCGCAATGCATCTGATCATCAGGCTGTG
ATGGCTCTTAGAGATTCTATCAAACGGCACTTAAAGCTGCCCCACAGCTA
TGTTATGGAATACAAGCCCCATGATGCTTCTCTGCGCGGATACTCGTCAT
ACAGAAACACATGGTTGAGAGGCTAGAATTTCACTAGGCTTTATGACACT
GCACTGATGGAGAAAGAACATGACAGTAGGGAGTCTTCTGGTTTTATTAC
ATGCTCTGGTTT
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