EY720295

Overview
NameEY720295
Unique NameEY720295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E3_DANRE (Eukaryotic translation initiation factor 4E type 3 OS=Danio rerio GN=eif4e3 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.722e-22
Identity = 66/210 (31.43%), Postives = 103/210 (49.05%), Query Frame = 3
Query:  123 TDKKESDINNTQTVADSVDNNNKDAEERQARELKANLH-----PLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQL-DY---GDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHD 725
            T ++ S +N+T+        N+   +ER+   +  ++      PL + + FW  R  PG  T    E N+KKI    TV+ FW  Y ++   S LP     HL +   RPLWE+ +N  GG W ++  K  +   W++L+LA +G+Q  DY    D + G  +S+R  ED++ VWN NAS       L    +   ++    V  YKPH+
Sbjct:   13 TARQSSPVNSTE--------NDIHIDERELENITNHVEDGTSLPLHSPWTFWLDRSLPGT-TAAECESNLKKIYTVHTVQSFWSVYNNIPPVSCLPLRCSYHLMRGERRPLWEEESNAKGGVWKMKVPKESTLAVWKELLLATIGEQFTDYCASEDEVVGVSVSVREREDVVQVWNGNASFANEANVLGRIYELLPQISFKAVF-YKPHE 212          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E2_ARATH (Eukaryotic translation initiation factor 4E-2 OS=Arabidopsis thaliana GN=EIF4E2 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 8.722e-22
Identity = 61/195 (31.28%), Postives = 98/195 (50.26%), Query Frame = 3
Query:  168 DSVDNNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKW---IIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIR--FNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLR 737
            D V+     A E  A E +   H L+ K+ FW+  ++   +   ++  +++K   F TVE FW  +  + + S L +  ++HLFK G+ P WED    NGGKW   +   +K    + W + ++AL+G+Q D  D ICG V S+R    +D LS+W R  S+   +M +    K  L +     + +  HD S R
Sbjct:    4 DDVNEPLPAAAELPATEAEKQPHKLERKWSFWFDNQS---KKGAAWGASLRKAYTFDTVEDFWGLHETIFQTSKLTANAEIHLFKAGVEPKWEDPECANGGKWTWVVTANRKEALDKGWLETLMALIGEQFDEADEICGVVASVRPQSKQDKLSLWTRTKSNEAVLMGIGKKWKEILDVTDK--ITFNNHDDSRR 193          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E2_SCHPO (Eukaryotic translation initiation factor 4E-2 OS=Schizosaccharomyces pombe GN=tif452 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.538e-21
Identity = 59/180 (32.78%), Postives = 94/180 (52.22%), Query Frame = 3
Query:  234 HPLKNKFVFWYTRR-TPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSG--RFWEDLVLALVGDQLD-YGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRGYSSYRNT 761
            HPL++++  W+ +  T G+     + D +K+I+ F TVE FW  +  +++ S+LP+ +D   F +GIRP WED  N NGGKW  + K   S     W  +VLA +G+ LD  G  + G V ++R     ++VW RN +D   +  +    K  L +     +EY  H+ S +  S    T
Sbjct:   64 HPLQHEWTLWFLKPPTQGLE----WSDLLKEIISFKTVEEFWGIFKTISKASMLPAKSDYSYFLKGIRPEWEDPQNMNGGKWAYQSKHKGSNLDELWLYMVLAAIGETLDPTGKEVTGVVCNMRKGFYRIAVWTRNCNDKDVLEKIGLRFKEVLGISDKETIEYSAHEDSSKAGSMRAKT 239          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: I4E3B_XENLA (Eukaryotic translation initiation factor 4E type 3-B OS=Xenopus laevis GN=eif4e3-B PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.384e-21
Identity = 57/167 (34.13%), Postives = 83/167 (49.70%), Query Frame = 3
Query:  237 PLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQL----DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHD 725
            PL + + FW  R  PG  T    E N+KKI    T++ FW  Y ++   S LP     HL +   +PLWE+ +N  GG W ++  K  S   W++L+LA +G+Q        D + G  +S+R  ED++ VWN NAS       L + I   L       + YKPH+
Sbjct:   42 PLNSPWTFWLDRSLPGT-TAAECESNLKKIYTVHTIQSFWSVYNNIPLVSNLPLRWSYHLMRGERKPLWEEESNAKGGVWKMKVPKEASSLVWKELLLATIGEQFTDHCSPEDEVIGVSVSVRDREDVVQVWNGNASVVGEAKVL-EKIYELLPNTSFKAVFYKPHE 206          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E3_MOUSE (Eukaryotic translation initiation factor 4E type 3 OS=Mus musculus GN=Eif4e3 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.643e-21
Identity = 60/169 (35.50%), Postives = 84/169 (49.70%), Query Frame = 3
Query:  237 PLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLD----YGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPH--SYVMEYKPHD 725
            PL + + FW  R  PG  T      N+KKI    TV+ FW  Y ++   + LP     HL +   RPLWE+ +N  GG W ++  K  +   W++L+LA +G+Q        D I G  +S+R  ED++ VWN NAS       L    K H  LPH     + YKPH+
Sbjct:   31 PLHSPWTFWLDRSLPGA-TAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLMRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEIIGVSVSVRDREDVVQVWNVNASLVGEATVLE---KIHQLLPHIAFKAVFYKPHE 195          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E3_XENTR (Eukaryotic translation initiation factor 4E type 3 OS=Xenopus tropicalis GN=eif4e3 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.259e-20
Identity = 56/167 (33.53%), Postives = 84/167 (50.30%), Query Frame = 3
Query:  237 PLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLD----YGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHD 725
            PL + + FW  R  PG  T    E N+KKI    T++ FW  Y ++ + + LP     HL +   +PLWE+ +N  GG W ++  K  S   W++L+LA +G+Q        D + G  +S+R  ED++ VWN NAS       L + I   L       + YKPH+
Sbjct:   42 PLHSPWTFWLDRSLPGT-TAAECESNLKKIYTVHTIQSFWSVYNNIPQVTNLPLRWSYHLMRGERKPLWEEESNAKGGVWKMKVPKEASSLVWKELLLATIGEQFTDRCAPEDEVIGVSVSVRDREDVVQVWNGNASVVGEATVL-EKIYELLPNTSFKAVFYKPHE 206          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: I4E3A_XENLA (Eukaryotic translation initiation factor 4E type 3-A OS=Xenopus laevis GN=eif4e3-A PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.645e-20
Identity = 57/167 (34.13%), Postives = 84/167 (50.30%), Query Frame = 3
Query:  237 PLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLD----YGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHD 725
            PL + + FW  R  PG  T    E N+KKI    T++ FW  Y ++   + LP     HL +   +PLWE+ +N  GG W ++  K  S   W++L+LA +G+Q        D + G  +S+R  EDI+ VWN NAS   A   + + I   L       + YKPH+
Sbjct:   42 PLHSPWTFWLDRSLPGT-TAAECESNLKKIYTVHTIQSFWSVYNNIPLVTNLPVRWSYHLMRGERKPLWEEESNAKGGVWKMKVPKEASSLVWKELLLATIGEQFTDRCAPEDEVIGVSVSVRDREDIVQVWNGNAS-VVAEATVLEKIYELLPNTSFKAVFYKPHE 206          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E1_CAEEL (Eukaryotic translation initiation factor 4E-1 OS=Caenorhabditis elegans GN=ife-1 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.148e-20
Identity = 57/193 (29.53%), Postives = 99/193 (51.30%), Query Frame = 3
Query:  207 QARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKK----VVSGRFWEDLVLALVGDQLDYG-DNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHL-------KLPHSYVMEYKPHDASLRGYSS 749
            +  +  A ++PLK  + +WY           S+ED +KK+  F+TV  FW  Y  +  PS L +  D ++F++ I+P+WE   N NGG+W+I   K     +    W ++++ALVG+Q     ++ICG V ++R     +SVW ++ +D +  M +   +K  L         P   V+ Y+ H++  +  SS
Sbjct:    3 ETEQTTAPIYPLKRNWTWWYLND----ERNKSWEDRLKKVYTFNTVSEFWALYDAIRPPSGLNALCDYNVFRDDIQPMWEVPENSNGGRWLIVIDKGKTPEMVDAIWLEILMALVGEQFGKDMESICGLVCNVRGKGSKISVWTKDCNDDETNMRIGVVLKEKLMAASKDHSKPLFDVIRYEDHESCQKKTSS 191          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E_ASHGO (Eukaryotic translation initiation factor 4E OS=Ashbya gossypii GN=TIF45 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.664e-20
Identity = 60/189 (31.75%), Postives = 98/189 (51.85%), Query Frame = 3
Query:  177 DNNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFK--KVVSGRFWEDLVLALVGDQLDYGD-NICGAVLSIRFNEDILSVWNRNASDHQAVMA-LRDSIKRHLKLPHSYVMEYKPHDAS 731
            DN  + A    +++     HPL +K+  WYT+  P V    S+ D ++ +  F+TVE FW     + +P  LP  +D HLF+  IRP WED AN  GGKW  +FK         W   +LA++G+ +D  +  I G V+++R +   + +W +  S  QA ++ +    K  L+L  S  +E+  H ++
Sbjct:   17 DNEERKAVLTDSKDFDLK-HPLNSKWTLWYTK--PPVGDNESWSDLLRPVTSFTTVEEFWAIQNAIPKPRELPLKSDYHLFRNDIRPEWEDEANSRGGKWSFQFKVRNPPIDDLWLRALLAVIGESIDEDEFEINGVVINVRRSGFKIGLWTK--SVRQAPLSKVGAKFKAVLQLDDSDTLEFFAHSSA 200          
BLAST of EY720295 vs. ExPASy Swiss-Prot
Match: IF4E3_HUMAN (Eukaryotic translation initiation factor 4E type 3 OS=Homo sapiens GN=EIF4E3 PE=2 SV=4)

HSP 1 Score: 98.2117 bits (243), Expect = 6.251e-20
Identity = 58/169 (34.32%), Postives = 84/169 (49.70%), Query Frame = 3
Query:  237 PLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLD----YGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPH--SYVMEYKPHD 725
            PL + + FW  R  PG  T      N+KKI    TV+ FW  Y ++   + LP     HL +   RPLWE+ +N  GG W ++  K  +   W++L+LA +G+Q        D + G  +S+R  ED++ VWN NAS       L    K +  LPH     + YKPH+
Sbjct:   48 PLHSSWTFWLDRSLPGA-TAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLMRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEVIGVSVSVRDREDVVQVWNVNASLVGEATVLE---KIYELLPHITFKAVFYKPHE 212          
The following BLAST results are available for this feature:
BLAST of EY720295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
IF4E3_DANRE8.722e-2231.43Eukaryotic translation initiation factor 4E type 3... [more]
IF4E2_ARATH8.722e-2231.28Eukaryotic translation initiation factor 4E-2 OS=A... [more]
IF4E2_SCHPO2.538e-2132.78Eukaryotic translation initiation factor 4E-2 OS=S... [more]
I4E3B_XENLA7.384e-2134.13Eukaryotic translation initiation factor 4E type 3... [more]
IF4E3_MOUSE9.643e-2135.50Eukaryotic translation initiation factor 4E type 3... [more]
IF4E3_XENTR1.259e-2033.53Eukaryotic translation initiation factor 4E type 3... [more]
I4E3A_XENLA1.645e-2034.13Eukaryotic translation initiation factor 4E type 3... [more]
IF4E1_CAEEL2.148e-2029.53Eukaryotic translation initiation factor 4E-1 OS=C... [more]
IF4E_ASHGO3.664e-2031.75Eukaryotic translation initiation factor 4E OS=Ash... [more]
IF4E3_HUMAN6.251e-2034.32Eukaryotic translation initiation factor 4E type 3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-004-E10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720295 ID=EY720295; Name=EY720295; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGCCCACGCGTCCGTCTTCACTTCCCTTGTTTGGTTAAAAG
TGAGAAAATTAGGGCTTGAGGTGAAGAAGAACAAAATTTTAAAAAGAAAA
AGAAAATCAATAAATGGAAATAACAGATAAGAAGGAATCCGATATCAATA
ACACACAAACAGTCGCCGATTCCGTCGATAACAATAACAAAGACGCCGAA
GAACGCCAAGCTCGTGAACTTAAAGCCAATTTGCATCCTCTTAAGAACAA
GTTTGTCTTTTGGTACACTCGTCGAACACCTGGAGTTCGAACTCAAACAT
CCTATGAGGACAACATAAAGAAAATTGTGGACTTCAGTACTGTTGAAGGC
TTTTGGGTCTGCTATTGCCACTTGGCTCGTCCTTCTTTGTTGCCAAGCCC
TACAGATTTGCATCTTTTCAAGGAAGGAATTCGCCCATTATGGGAGGACT
CTGCAAATTGCAATGGCGGTAAATGGATAATAAGGTTCAAGAAAGTTGTA
TCAGGTCGCTTTTGGGAAGATCTGGTTCTTGCCTTGGTGGGTGACCAGCT
TGACTATGGTGATAACATATGTGGTGCAGTCCTAAGCATTCGATTCAATG
AAGATATATTGAGTGTGTGGAACCGCAATGCATCTGATCATCAGGCTGTG
ATGGCTCTTAGAGATTCTATCAAACGGCACTTAAAGCTGCCCCACAGCTA
TGTTATGGAATACAAGCCCCATGATGCTTCTCTGCGCGGATACTCGTCAT
ACAGAAACACATGGTTGAGAGGCTAGAATTTCACTAGGCTTTATGACACT
GCACTGATGGAGAAAGAACATGACAGTAGGGAGTCTTCTGGTTTTATTAC
ATGCTCTGGTTT
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