DN621308

Overview
NameDN621308
Unique NameDN621308
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATB3_GIALA (Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.797e-32
Identity = 71/161 (44.10%), Postives = 89/161 (55.28%), Query Frame = -3
Query:  237 SAWRYFVHHGVVTEECDPYFD-STGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 716
            S WR+    G  T+EC PY   STG              C  KC   + L    K      Y +  D   IM  +   GP++ +FTVY DF +Y+SGVY+H  G V GGHAV ++G+GT DDG DYWI+ N W   WG DGYF+I R +NECGIEE V+ G
Sbjct:  147 SVWRFLTKTGTTTDECVPYQSGSTGARGT----------CPTKCADGSDLPHLYKATKAVDYGL--DAPAIMKALATGGPLQTAFTVYSDFMYYESGVYQHTYGRVEGGHAVDMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRIIRMTNECGIEEQVIGG 295          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATB2_GIALA (Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.950e-28
Identity = 64/161 (39.75%), Postives = 90/161 (55.90%), Query Frame = -3
Query:  237 SAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNS-KHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 716
            + W++    G  T+EC PY   +      C    PT KC     K +     S K Y +       D   +M  +  +GP++V+F V+ DF +Y+SGVY+H  G + GGHAV+++G+GT DDG DYWI+ N W   WG DGYF++ RG N+C IEE   AG
Sbjct:  148 NVWKFLTKTGTTTDECVPYKSGSTTLRGTC----PT-KCADGSSKVHLATATSYKDYGL-------DIPAMMKALSTSGPLQVAFLVHSDFMYYESGVYQHTYGYMEGGHAVEMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRMIRGINDCSIEEQAYAG 296          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: TINAG_HUMAN (Tubulointerstitial nephritis antigen OS=Homo sapiens GN=TINAG PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 9.677e-28
Identity = 67/179 (37.43%), Postives = 94/179 (52.51%), Query Frame = -3
Query:  240 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPA---------YPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGD--------VMGGHAVKLIGWGT----SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVA 713
            AW Y    G+V+  C P F     ++ GC  A         + T  C     K N++++ S       YR++S+  +IM EI +NGPV+    V EDF HYK+G+Y+H+T           +  HAVKL GWGT        E +WI AN W +SWG +GYF+I RG NE  IE+ ++A
Sbjct:  292 AWWYLRKRGLVSHACYPLFKDQNATNNGCAMASRSDGRGKRHATKPCPNNVEKSNRIYQCSP-----PYRVSSNETEIMKEIMQNGPVQAIMQVREDFFHYKTGIYRHVTSTNKESEKYRKLQTHAVKLTGWGTLRGAQGQKEKFWIAANSWGKSWGENGYFRILRGVNESDIEKLIIA 465          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: TINAG_BOVIN (Tubulointerstitial nephritis antigen OS=Bos taurus GN=TINAG PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.156e-27
Identity = 71/195 (36.41%), Postives = 100/195 (51.28%), Query Frame = -3
Query:  192 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPA---------YPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGD--------VMGGHAVKLIGWGT----SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEITSAD 713
            AW Y    G+V+  C P F     ++ GC  A         + T  C     K N++++ S       YR++S+  +IM EI +NGPV+    V+EDF +YK+G+Y+HIT              HAVKL GWGT        E +WI AN W +SWG +GYF+I RG NE  IE+ ++A          ++TSAD
Sbjct:  292 AWWYLRKRGLVSHACYPLFKDQNATNNGCAMASRSDGRGKRHATTPCPNSIEKSNRIYQCSP-----PYRVSSNETEIMREIMQNGPVQAIMQVHEDFFNYKTGIYRHITSTNEDSEKYRKFRTHAVKLTGWGTLRGAQGQKEKFWIAANSWGKSWGENGYFRILRGVNESDIEKLIIAAW-------GQLTSAD 474          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATB1_GIALA (Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=2 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 3.805e-24
Identity = 57/159 (35.85%), Postives = 84/159 (52.83%), Query Frame = -3
Query:  240 WRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAY-RINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDV-MGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVA 710
            W +    G  T EC  Y D     H    P      C   C   + +    + Y    Y +++     IM  +   GP++    VY D ++Y+SGVYKH  G + +G HA++++G+GT+DDG DYWI+ N W   WG +GYF+I RG NEC IE+++ A
Sbjct:  154 WSFLTFTGATTAECVKYVDY---GHTVASP------CPAVCDDGSPI----QLYKAHGYGQVSKSVPAIMGMLVAGGPLQTMIVVYADLSYYESGVYKHTYGTINLGFHALEIVGYGTTDDGTDYWIIKNSWGPDWGENGYFRIVRGVNECRIEDEIYA 299          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATC_MACFA (Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=CTSC PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.221e-23
Identity = 64/176 (36.36%), Postives = 93/176 (52.84%), Query Frame = -3
Query:  222 ISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWR--NSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 719
            ++A +Y    G+V E C PY   TG   P              C  K   +R  +S+++ +  +    +   +  E+  +GP+ V+F VY+DF HY++G+Y H TG         +  HAV L+G+GT S  G DYWI+ N W  SWG DGYF+I+RG++EC IE   VA  P  K
Sbjct:  305 LTAGKYAQDFGLVEEACFPY---TGTDSP--------------CKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVYHGPLAVAFEVYDDFLHYQNGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTSWGEDGYFRIRRGTDECAIESIAVAATPIPK 462          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.177e-23
Identity = 64/174 (36.78%), Postives = 89/174 (51.15%), Query Frame = -3
Query:  222 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWR--NSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 713
            A +Y    G+V E C PY   TG   P              C  K   +R  +S+++ +  +    +   +  E+  +GP+ V+F VY+DF HYK G+Y H TG         +  HAV L+G+GT S  G DYWI+ N W   WG DGYF+I+RG++EC IE   VA  P  K
Sbjct:  307 AGKYAQDFGLVEEACFPY---TGTDSP--------------CKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGEDGYFRIRRGTDECAIESIAVAATPIPK 462          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATC_CANFA (Dipeptidyl-peptidase 1 (Fragment) OS=Canis familiaris GN=CTSC PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.599e-22
Identity = 64/172 (37.21%), Postives = 91/172 (52.91%), Query Frame = -3
Query:  222 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 713
            A +Y    G+V E C PY    G   P C+P      C R        + +S++Y +  +    +   +  E+ ++GP+ V+F VY+DF HY+ G+Y H TG         +  HAV L+G+GT S  G DYWI+ N W   WG DGYF+I+RG++EC IE   VA  P  K
Sbjct:  280 AGKYAQDFGLVEEACFPY---AGSDSP-CKPN----DCFR--------YYSSEYYYVGGFYGACNEALMKLELVRHGPMAVAFEVYDDFFHYQKGIYYH-TGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGSRWGEDGYFRIRRGTDECAIESIAVAATPIPK 434          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATC_RAT (Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Ctsc PE=1 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 2.727e-22
Identity = 60/172 (34.88%), Postives = 88/172 (51.16%), Query Frame = -3
Query:  222 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 713
            A +Y    GVV E C PY  +         P  P   C+R        + +S++Y +  +    +   +  E+ K+GP+ V+F V++DF HY SG+Y H TG         +  HAV L+G+G     G DYWI+ N W   WG  GYF+I+RG++EC IE   +A +P  K
Sbjct:  306 AGKYAQDFGVVEENCFPYTATDA-------PCKPKENCLR--------YYSSEYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHH-TGLSDPFNPFELTNHAVLLVGYGKDPVTGLDYWIVKNSWGSQWGESGYFRIRRGTDECAIESIAMAAIPIPK 461          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.727e-22
Identity = 63/174 (36.21%), Postives = 89/174 (51.15%), Query Frame = -3
Query:  222 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWR--NSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 713
            A +Y    G+V E C PY   TG   P              C  K   +R  +S+++ +  +    +   +  E+  +GP+ V+F VY+DF HYK G+Y H TG         +  HAV L+G+GT S  G DYWI+ N W   WG +GYF+I+RG++EC IE   VA  P  K
Sbjct:  307 AGKYAQDFGLVEEACFPY---TGTDSP--------------CKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATPIPK 462          
The following BLAST results are available for this feature:
BLAST of DN621308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
CATB3_GIALA3.797e-3244.10Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=... [more]
CATB2_GIALA1.950e-2839.75Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=... [more]
TINAG_HUMAN9.677e-2837.43Tubulointerstitial nephritis antigen OS=Homo sapie... [more]
TINAG_BOVIN2.156e-2736.41Tubulointerstitial nephritis antigen OS=Bos taurus... [more]
CATB1_GIALA3.805e-2435.85Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=... [more]
CATC_MACFA3.221e-2336.36Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=C... [more]
CATC_PONAB7.177e-2336.78Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]
CATC_CANFA1.599e-2237.21Dipeptidyl-peptidase 1 (Fragment) OS=Canis familia... [more]
CATC_RAT2.727e-2234.88Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Cts... [more]
CATC_HUMAN2.727e-2236.21Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06I15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006I15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621308 ID=DN621308; Name=DN621308; organism=Citrus sinensis; type=EST; length=811bp
GGGCCCCCTTTTTTTTTTAACACAACATTAAACTCCATTAATACATTCAA
TTATGCAAGACGGGAGCTTCCCATTTCATGCCTTGATAGCTTAGGTTCAA
CGATACACCCCTATAGCTACACATTTGATATATAAATAACAACATGAAGG
TATAGCAAAGTCTGCTCTCAAGCTGAAGCATCCTCAAACATATCTGCACT
TGTAATCTCTTTGACAAGATTTTTGGATGAAGGCAAACCAGCAACCACAT
CCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCA
TCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTC
GCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCA
TTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAA
TCCTCATAAACTGTGAAGGAAACTTCAACTGGTCCATTCTTGTAAATTTC
TGCCATTATGTCCTCTGGATCAGAATTGATTCTATATGCACTAATACTGT
AGTGCTTTGAATTCCTCCAAAGCTGGTTTTTCTTGACGCACTTCCTCACA
CACTTTGGAGTAGGATATGCCGGCTCACAACCAGGGTGGGAACAGCCAGT
ACTATCAAAGTAGGGATCACACTCTTCGGTAACAACACCATGGTGGACAA
AGTATCGCCATGCAGAAATTGGATAACCCCCGTCACAACCATCTCCACAC
AAAAAGCCACAGCAGGCTAAAAGATCATTAACTGATAGAAATAGGTTCAT
GCCAAAATGGA
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