DN621308

Overview
NameDN621308
Unique NameDN621308
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATZ_HUMAN (Cathepsin Z OS=Homo sapiens GN=CTSZ PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.893e-15
Identity = 47/147 (31.97%), Postives = 64/147 (43.54%), Query Frame = -3
Query:  285 ISAWRYFVHHGVVTEECDPYF--DSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKI 719
            +S W Y   HG+  E C+ Y   D        C       +C    ++   LWR   + S+S        E +MAEIY NGP+       E  A+Y  G+Y          H V + GWG S DG +YWI+ N W   WG  G+ +I
Sbjct:  138 LSVWDYAHQHGIPDETCNNYQAKDQECDKFNQCGTCNEFKEC--HAIRNYTLWRVGDYGSLSGR------EKMMAEIYANGPISCGIMATERLANYTGGIYAEYQDTTYINHVVSVAGWGIS-DGTEYWIVRNSWGEPWGERGWLRI 275          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.022e-13
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = -3
Query:  258 AYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 539
            AY + S+ + +   +++ GPV V+  V  D  +YKSGV KH + D    H V L+G+G  +D + YW L N W   WG  G+F+IKR  N CGI
Sbjct:  242 AYDLRSEKK-LRQVLHEKGPVSVAIDVV-DLTNYKSGVAKHCSVDHGLNHGVLLVGYGQENDVK-YWTLKNSWGSDWGEQGFFRIKRDVNSCGI 332          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATC_PLAF7 (Probable cathepsin C OS=Plasmodium falciparum (isolate 3D7) GN=PF11_0174 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.733e-13
Identity = 47/135 (34.81%), Postives = 64/135 (47.41%), Query Frame = -3
Query:  255 KKNQLWRNSKHYSISAYRIN--SDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVY--------------------KHITGDVMGGHAVKLIGWGTSD-DGE--DYWILANQWNRSWGADGYFKIKRGSNECGIE 584
            ++N+ +    +Y    Y  N  +  + +M EIY+NGP+  SF    DF  Y  GVY                     +ITG     HA+ L+GWG  + +G+   YWI  N W   WG +GYFKI RG N  GIE
Sbjct:  538 EENRWYAKDFNYVGGCYGCNQCNGEKIMMNEIYRNGPIVSSFEASPDFYDYADGVYFVEDFPHARRCTIEPKNDGVYNITGWDRVNHAIVLLGWGEEEINGKLYKYWIGRNSWGNGWGKEGYFKILRGQNFSGIE 672          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.148e-12
Identity = 54/161 (33.54%), Postives = 73/161 (45.34%), Query Frame = -3
Query:  258 PISAWRYFVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAE-IYKNGPVEVSFTVYEDFAHYKSGVYK----HITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 722
            P  A+ Y +++ G++ E+  PY    G      E A    K V                      I  + E  M E +    PV  +F V EDF  YKSGVY     H T D +  HAV  +G+G   +G  YWI+ N W  +WG +GYF I+RG N CG+
Sbjct:  184 PSQAFEYILYNKGIMGEDSYPYIGKNGQCKFNPEKAVAFVKNV--------------------VNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVN-HAVLAVGYG-EQNGLLYWIVKNSWGSNWGNNGYFLIERGKNMCGL 322          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.959e-12
Identity = 38/79 (48.10%), Postives = 47/79 (59.49%), Query Frame = -3
Query:  258 PVEVSFTVYEDFAHYKSGVYK----HITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 482
            PV  +F V EDF  YKSGVY     H T D +  HAV  +G+G   +G  YWI+ N W   WG +GYF I+RG N CG+
Sbjct:  246 PVSFAFEVTEDFLMYKSGVYSSKSCHKTPDKVN-HAVLAVGYG-EQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGL 322          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.558e-12
Identity = 35/78 (44.87%), Postives = 46/78 (58.97%), Query Frame = -3
Query:  258 PVEVSFTVYEDFAHYKSGVYKHIT-GDVMG--GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 482
            PV V+F V + F  YKSGVY     GD      HAV  +G+G  ++G  YW++ N W   WG DGYFK++ G N CG+
Sbjct:  270 PVSVAFEVVKGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGV-ENGTPYWLIKNSWGADWGEDGYFKMEMGKNMCGV 346          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.341e-12
Identity = 51/163 (31.29%), Postives = 72/163 (44.17%), Query Frame = -3
Query:  258 PISAWRYFVHHGVV-TEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAE-IYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMG------GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 722
            P  A+ Y  ++G + TEE  PY    G  H   E                    N+    + +  I  + ED +   +    PV V+F V + F  YKSGVY   T D  G       HAV  +G+G  ++G  YW++ N W   WG +GYFK++ G N C I
Sbjct:  213 PSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAE--------------------NAAVQVLDSVNITLNAEDELKNAVGLVRPVSVAFQVIDGFRQYKSGVY---TSDHCGTTPDDVNHAVLAVGYGV-ENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAI 351          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.364e-12
Identity = 36/81 (44.44%), Postives = 46/81 (56.79%), Query Frame = -3
Query:  258 PVEVSFTVYEDFAHYKSGVYKHITGDVMG------GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 482
            PV V+F V   F  YKSGVY   T D  G       HAV  +G+G  +DG  YW++ N W   WG +GYFK++ G N CG+
Sbjct:  274 PVSVAFEVITGFRLYKSGVY---TSDHCGTTPMDVNHAVLAVGYGV-EDGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGV 350          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.364e-12
Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = -3
Query:  258 SDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYK----HITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 524
            +D E ++  +    PV  +F V  DF  Y+ G+Y     H T D +  HAV  +G+G  ++G  YWI+ N W   WG +GYF I+RG N CG+
Sbjct:  234 NDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVN-HAVLAVGYG-EENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGL 324          
BLAST of DN621308 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.700e-12
Identity = 50/149 (33.56%), Postives = 72/149 (48.32%), Query Frame = -3
Query:  198 EPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRG----SNECGIEEDVVAGLPSSKNLVKEITS 626
            E  YP      KC   N L +NS+  +I  Y  + S  E  +       PV V+       F HY+SG++    G  M  HAV  +G+G S++G DYWI+ N W   WG DGY +++R     S +CGI  +    +  S N V+  +S
Sbjct:  184 EKDYPYHGTNGKC---NSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGKCGTNMD-HAVVAVGYG-SENGVDYWIVRNSWGTRWGEDGYIRMERNVASKSGKCGIAIEASYPVKYSPNPVRGTSS 327          
The following BLAST results are available for this feature:
BLAST of DN621308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
CATZ_HUMAN1.893e-1531.97Cathepsin Z OS=Homo sapiens GN=CTSZ PE=1 SV=1[more]
CATV_GVXN3.022e-1341.49Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATC_PLAF76.733e-1334.81Probable cathepsin C OS=Plasmodium falciparum (iso... [more]
CATH_RAT1.148e-1233.54Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATH_MOUSE1.959e-1248.10Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CYSP3_SOLLC2.558e-1244.87Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
ALEU_HORVU3.341e-1231.29Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CYSP2_MAIZE4.364e-1244.44Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CATH_PIG4.364e-1238.71Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CYSP4_BRANA5.700e-1233.56Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06I15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006I15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621308 ID=DN621308; Name=DN621308; organism=Citrus sinensis; type=EST; length=811bp
GGGCCCCCTTTTTTTTTTAACACAACATTAAACTCCATTAATACATTCAA
TTATGCAAGACGGGAGCTTCCCATTTCATGCCTTGATAGCTTAGGTTCAA
CGATACACCCCTATAGCTACACATTTGATATATAAATAACAACATGAAGG
TATAGCAAAGTCTGCTCTCAAGCTGAAGCATCCTCAAACATATCTGCACT
TGTAATCTCTTTGACAAGATTTTTGGATGAAGGCAAACCAGCAACCACAT
CCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCA
TCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTC
GCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCA
TTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAA
TCCTCATAAACTGTGAAGGAAACTTCAACTGGTCCATTCTTGTAAATTTC
TGCCATTATGTCCTCTGGATCAGAATTGATTCTATATGCACTAATACTGT
AGTGCTTTGAATTCCTCCAAAGCTGGTTTTTCTTGACGCACTTCCTCACA
CACTTTGGAGTAGGATATGCCGGCTCACAACCAGGGTGGGAACAGCCAGT
ACTATCAAAGTAGGGATCACACTCTTCGGTAACAACACCATGGTGGACAA
AGTATCGCCATGCAGAAATTGGATAACCCCCGTCACAACCATCTCCACAC
AAAAAGCCACAGCAGGCTAAAAGATCATTAACTGATAGAAATAGGTTCAT
GCCAAAATGGA
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