DN621304

Overview
NameDN621304
Unique NameDN621304
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_DESPS (Octanoyltransferase OS=Desulfotalea psychrophila GN=lipB PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.203e-33
Identity = 83/208 (39.90%), Postives = 120/208 (57.69%), Query Frame = 1
Query:   73 LGIVNYSDALKLQEKLVSDRKIHKIS-DTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWV--GDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPL-PAEDVIHEQLVSCFARQFG 684
            LG  +Y      Q+ +V+ R    +  D  L  +HPP YTLGKR  + +L IS+  L + G ++   +RGG+IT+HGP Q +LYPI+ LR   +    YV  LE TMI +A+ +GV+     +   G+W   G  KIG+IG+ I++G++ HG AFN++ DL  F  I PCG+     TSL RE G    PAE  + ++L+S  A  FG
Sbjct:    7 LGATSYIACYATQQAVVARRCSGDLDRDCFLLTEHPPVYTLGKRGGEQHLHISKEMLAQKGIDVVSIERGGEITYHGPGQLVLYPILHLRKRKMRVTEYVGLLEETMIRLAADFGVRVVRNTR-NAGVWTEDGRSKIGSIGIAIRHGVSFHGFAFNLNTDLEPFSWINPCGLTGVTATSLAREAGTDFDPAE--VKKRLLSIVADLFG 211          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_PELPD (Octanoyltransferase OS=Pelobacter propionicus (strain DSM 2379) GN=lipB PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.229e-32
Identity = 72/190 (37.89%), Postives = 112/190 (58.95%), Query Frame = 1
Query:   73 LGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDV 642
            LG+V+Y+ A  LQE++      +   +TLL L+H P YT+G+   + N+L    +  ++        RGGD+TFHGP Q + YP+I+LR  G   R+Y+  LE  +I + + +GV A     G+TG+W    K+ AIGV +++ +T HG A N++ DL+ F+ I PCGIA   + SL R  G P+  ++V
Sbjct:    6 LGVVDYAAAFSLQERIADGVYRNATPETLLLLEHHPVYTIGRAGCEENILDHSIQAIRIS-------RGGDVTFHGPGQLVGYPLINLRPRGCDLRHYLRFLEELLISVVADFGVSAFR-VPGKTGVWTDQGKLAAIGVGVRHWVTMHGFAMNVNNDLSSFERINPCGIATCPIASLERLCGCPIAMDEV 187          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_SYNFM (Octanoyltransferase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=lipB PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.605e-32
Identity = 75/213 (35.21%), Postives = 122/213 (57.28%), Query Frame = 1
Query:   52 RSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFGYD 690
            R   +  LG+++Y+ +  LQ++L + R I  + DT+L ++HP T TLG+R     L  S  +L+++G  +   +RGGD+T+HGP QA++YPI+ LR+ GL   +YV  LES +I +   +G+K     K   G+WVG  KI ++G+ +   ++ HG+A N   +L YF  I  CG+   ++TS+ R  G  +   +V H  +     R F  D
Sbjct:    3 RKAFLLNLGMLDYNRSRDLQKRLHARRVIDVVPDTVLLVEHPHTITLGRRGNRLCLKASPEDLERMGIPVVQVERGGDVTYHGPGQAVVYPILHLRESGLSLADYVSALESLVIGVLGDFGIKGRRNGKNR-GVWVGGDKIASVGIAVSRWVSYHGIALNCTTNLEYFGLIDACGLKGVEMTSISRLLGKDVSGSEV-HRSIAFHLRRLFERD 213          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_MYCSS (Octanoyltransferase OS=Mycobacterium sp. (strain MCS) GN=lipB PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.096e-32
Identity = 89/204 (43.63%), Postives = 118/204 (57.84%), Query Frame = 1
Query:   52 RSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQ-KGETGIWV-GD-----RKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDV 642
            R +++ RLG V Y DA +LQ  LV D ++   SD LL LQHP  YT GKR   H       E    G  +  T RGG IT+HGP Q + YPI+ L +  L   N+V ++E  +I + +  G+ A  G+ +G +G+W+ GD     RKIGAIG+R+  G T HG A N D DL+ F  IVPCGIAD  VTSL  E G  +  ++V
Sbjct:   12 RPVEVRRLGTVEYLDAWELQRGLV-DARVAGGSDALLLLQHPSVYTAGKRTEPH-------ERPADGTPVVDTDRGGKITWHGPGQLVGYPIVGLAE-PLDVVNFVRRIEEALIAVCTGLGLDA--GRVEGRSGVWLPGDGLRPERKIGAIGIRVSRGTTLHGFALNCDCDLSAFSAIVPCGIADAGVTSLTAELGRRVTVDEV 204          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_MYCSK (Octanoyltransferase OS=Mycobacterium sp. (strain KMS) GN=lipB PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.096e-32
Identity = 89/204 (43.63%), Postives = 118/204 (57.84%), Query Frame = 1
Query:   52 RSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQ-KGETGIWV-GD-----RKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDV 642
            R +++ RLG V Y DA +LQ  LV D ++   SD LL LQHP  YT GKR   H       E    G  +  T RGG IT+HGP Q + YPI+ L +  L   N+V ++E  +I + +  G+ A  G+ +G +G+W+ GD     RKIGAIG+R+  G T HG A N D DL+ F  IVPCGIAD  VTSL  E G  +  ++V
Sbjct:   12 RPVEVRRLGTVEYLDAWELQRGLV-DARVAGGSDALLLLQHPSVYTAGKRTEPH-------ERPADGTPVVDTDRGGKITWHGPGQLVGYPIVGLAE-PLDVVNFVRRIEEALIAVCTGLGLDA--GRVEGRSGVWLPGDGLRPERKIGAIGIRVSRGTTLHGFALNCDCDLSAFSAIVPCGIADAGVTSLTAELGRRVTVDEV 204          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_MYCSJ (Octanoyltransferase OS=Mycobacterium sp. (strain JLS) GN=lipB PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.096e-32
Identity = 89/204 (43.63%), Postives = 118/204 (57.84%), Query Frame = 1
Query:   52 RSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQ-KGETGIWV-GD-----RKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDV 642
            R +++ RLG V Y DA +LQ  LV D ++   SD LL LQHP  YT GKR   H       E    G  +  T RGG IT+HGP Q + YPI+ L +  L   N+V ++E  +I + +  G+ A  G+ +G +G+W+ GD     RKIGAIG+R+  G T HG A N D DL+ F  IVPCGIAD  VTSL  E G  +  ++V
Sbjct:   12 RPVEVRRLGTVEYLDAWELQRGLV-DARVAGGSDALLLLQHPSVYTAGKRTEPH-------ERPADGTPVVDTDRGGKITWHGPGQLVGYPIVGLAE-PLDVVNFVRRIEEALIAVCTGLGLDA--GRVEGRSGVWLPGDGLRPERKIGAIGIRVSRGTTLHGFALNCDCDLSAFSAIVPCGIADAGVTSLTAELGRRVTVDEV 204          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_GRAFK (Octanoyltransferase OS=Gramella forsetii (strain KT0803) GN=lipB PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.096e-32
Identity = 85/226 (37.61%), Postives = 117/226 (51.77%), Query Frame = 1
Query:   52 RSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDT-----------LLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG-----DRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQF 681
            + +++  LGI +Y +    QE +  +    KI +             L ++HP  YTLGK     NLLISE ELK   A  +   RGGDIT+HGP Q + YPI+ L +       Y+  LE  +I   S YG+K+     GETG+W+       RKI A+GVR    +T HG A N++ DL YF +I+PCGI  K VTSL  E G      + + E+L+  F   F
Sbjct:    3 KEVEVRNLGIKDYKETWDYQENIFKETVDLKIKNRREGTEIPTRNYFLFVEHPHVYTLGKSGDAENLLISEKELKAKNATFYKINRGGDITYHGPGQIVGYPILDLDNFFTDIHKYLRLLEEAVILTLSEYGLKS-ERSPGETGVWLDVGTPFARKICAMGVRASRWVTMHGFALNVNADLGYFDNIIPCGIKGKAVTSLNVELGQKEINLEEVQEKLLKHFQELF 227          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_FLAPJ (Octanoyltransferase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=lipB PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.737e-32
Identity = 82/226 (36.28%), Postives = 121/226 (53.54%), Query Frame = 1
Query:   52 RSLQIWRLGIVNYSDALKLQEKL--------VSDRKIHKISDT---LLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG-----DRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQF 681
            +++Q+  LG  +Y      QE+L        + +R+  +   T    L ++HP  YTLGK     NLL+SE +L+  GA  +   RGGDIT+HGP Q + YPI+ L +       Y+  LE  +I   + Y +     + GETG+W+G      RKI A+GVR    +T HG A N + DL YF +I+PCGI  K VTSL  E G+    E+ + E+++  F + F
Sbjct:    3 KTIQLQDLGHKDYKATWDYQEQLFQNVLDIKIQNRREERQDQTPNYFLFVEHPHVYTLGKSGDLSNLLLSEKQLEAKGATFYKINRGGDITYHGPGQIVGYPILDLENFFTDIHKYLRLLEEAIILTLAEYNITGTRSE-GETGVWLGVGTPFARKICALGVRASRWVTMHGFALNANADLGYFDNIIPCGIKGKAVTSLNVELGVEKVNEEEVKEKILKHFTQLF 227          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_CLOK5 (Octanoyltransferase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=lipB PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.737e-32
Identity = 75/175 (42.86%), Postives = 106/175 (60.57%), Query Frame = 1
Query:   79 IVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSL 603
            +++YS+ +++Q+K       + I   LL LQH P  T+GK    +N+L S+ EL K   +L +T RGG++T+HGP Q + YPI++L +       Y+ +LE  +I     YG+KA    K  TG+WVGDRKI AIGV I+  IT HG A NI  +  +FK IVPCGI +  V SL
Sbjct:   12 LISYSEGIEIQQKAFDFVIRNNIDGILLLLQHKPVITIGKSGGKNNILASKYELDKYSIDLCHTSRGGNVTYHGPGQLVGYPILNLNNFQKDIHLYLRQLELILINTVREYGIKAGIKPK-YTGVWVGDRKIAAIGVGIRKWITRHGFAINISVNKEHFKLIVPCGIKEFGVCSL 185          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_MAGSM (Octanoyltransferase OS=Magnetococcus sp. (strain MC-1) GN=lipB PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.097e-32
Identity = 81/214 (37.85%), Postives = 120/214 (56.07%), Query Frame = 1
Query:   40 MKVPRSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQF 681
            M  PR++ +    +  Y  A + Q   V      +  DTL+ L+H P YTLGKR T        A++ +      YT RGG +T+HGP Q ++Y + +LR    G R +V +LE  ++E+ + YGV       G  GIWVGD KI +IGVR+  G+T HGL+ N DPDL++F+ I+PCG   + VTSL    G+ + +   + +++V  F RQF
Sbjct:    1 MHEPRAVVVVHRDVWAYQQAWEQQLAWVQAIHEGQRQDTLILLEHMPVYTLGKRAT-------RADVLRQDIPAVYTDRGGQVTYHGPGQLVVYVLWNLRGQLHGVRAHVARLEEMVMEVLAHYGVVGQRDGAGP-GIWVGDAKIASIGVRVTQGVTLHGLSLNRDPDLSHFQGIIPCGQVGRPVTSL-AALGVAV-SRQALEQRMVEAFERQF 204          
The following BLAST results are available for this feature:
BLAST of DN621304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 436
Match NameE-valueIdentityDescription
LIPB_DESPS7.203e-3339.90Octanoyltransferase OS=Desulfotalea psychrophila G... [more]
LIPB_PELPD1.229e-3237.89Octanoyltransferase OS=Pelobacter propionicus (str... [more]
LIPB_SYNFM1.605e-3235.21Octanoyltransferase OS=Syntrophobacter fumaroxidan... [more]
LIPB_MYCSS2.096e-3243.63Octanoyltransferase OS=Mycobacterium sp. (strain M... [more]
LIPB_MYCSK2.096e-3243.63Octanoyltransferase OS=Mycobacterium sp. (strain K... [more]
LIPB_MYCSJ2.096e-3243.63Octanoyltransferase OS=Mycobacterium sp. (strain J... [more]
LIPB_GRAFK2.096e-3237.61Octanoyltransferase OS=Gramella forsetii (strain K... [more]
LIPB_FLAPJ2.737e-3236.28Octanoyltransferase OS=Flavobacterium psychrophilu... [more]
LIPB_CLOK52.737e-3242.86Octanoyltransferase OS=Clostridium kluyveri (strai... [more]
LIPB_MAGSM6.097e-3237.85Octanoyltransferase OS=Magnetococcus sp. (strain M... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06I13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006I13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621304 ID=DN621304; Name=DN621304; organism=Citrus sinensis; type=EST; length=782bp
CCCCCTTCTCCTGACGGCCTGTATTTGTATTATCAGGGAATGAAAGTTCC
ACGGAGTTTACAGATCTGGAGACTGGGCATTGTCAACTACTCCGATGCAC
TTAAGCTGCAGGAAAAACTGGTCTCTGATAGAAAAATTCATAAGATTTCT
GATACCCTCTTGTCCCTTCAGCATCCACCCACGTATACCCTTGGAAAACG
GCGTACGGATCATAATTTATTAATTTCTGAGGCTGAACTGAAAAAGTTAG
GAGCTGAACTTCATTACACTCAGAGAGGAGGAGACATTACATTTCATGGT
CCCCACCAAGCAATTCTGTATCCCATTATTTCCCTTCGTGATATTGGACT
TGGTGCTCGAAATTATGTGGAGAAACTTGAGTCAACTATGATTGAAATAG
CATCACTATATGGAGTTAAAGCTTGCCCTGGACAAAAGGGTGAGACAGGA
ATTTGGGTTGGAGATAGAAAGATAGGTGCAATTGGAGTTCGGATACAATA
TGGAATTACTTCCCATGGGTTGGCATTCAACATAGATCCTGATTTGAACT
ATTTTAAGCATATCGTGCCTTGTGGGATTGCAGATAAAGATGTCACATCT
TTGAGAAGGGAGACAGGTATTCCGCTTCCTGCTGAAGATGTAATTCATGA
GCAGTTAGTTTCTTGTTTTGCTAGACAGTTTGGCTATGATAGTCTTATCT
GGAAGGATAATGTCTCAATATTGTCAGATAATTAGGAAGTCAATTGAGAT
GTATAGTATGCCTGGCAAATAAATCATGTAAA
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