DN621304

Overview
NameDN621304
Unique NameDN621304
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_BURP1 (Octanoyltransferase OS=Burkholderia pseudomallei (strain 1710b) GN=lipB PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.249e-18
Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 1
Query:  124 SDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGD-----RKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIA 582
            +D +     D +  ++HPP YTLG+     +LL++++     G  L    RGG IT+HGP Q + Y ++ LR   L  R  V ++E  +IE  + Y + A   + G  GI+V        KI A+G++I+ G + HGL+ N+  DL  F  I PCG A
Sbjct:   53 TDARTPDTDDEIWVVEHPPVYTLGQAGNPAHLLVADS-----GVPLVKVDRGGQITYHGPGQIVAYLLVDLRRRKLMVRTLVTRIEEAVIETLAAYNL-ASARKAGAPGIYVESGPHRGAKIAALGLKIRNGCSYHGLSVNVKMDLRPFLAINPCGYA 204          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_BURP0 (Octanoyltransferase OS=Burkholderia pseudomallei (strain 1106a) GN=lipB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.249e-18
Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 1
Query:  124 SDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGD-----RKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIA 582
            +D +     D +  ++HPP YTLG+     +LL++++     G  L    RGG IT+HGP Q + Y ++ LR   L  R  V ++E  +IE  + Y + A   + G  GI+V        KI A+G++I+ G + HGL+ N+  DL  F  I PCG A
Sbjct:   45 TDARTPDTDDEIWVVEHPPVYTLGQAGNPAHLLVADS-----GVPLVKVDRGGQITYHGPGQIVAYLLVDLRRRKLMVRTLVTRIEEAVIETLAAYNL-ASARKAGAPGIYVESGPHRGAKIAALGLKIRNGCSYHGLSVNVKMDLRPFLAINPCGYA 196          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_BURMS (Octanoyltransferase OS=Burkholderia mallei (strain SAVP1) GN=lipB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.249e-18
Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 1
Query:  124 SDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGD-----RKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIA 582
            +D +     D +  ++HPP YTLG+     +LL++++     G  L    RGG IT+HGP Q + Y ++ LR   L  R  V ++E  +IE  + Y + A   + G  GI+V        KI A+G++I+ G + HGL+ N+  DL  F  I PCG A
Sbjct:   48 TDARTPDTDDEIWVVEHPPVYTLGQAGNPAHLLVADS-----GVPLVKVDRGGQITYHGPGQIVAYLLVDLRRRKLMVRTLVTRIEEAVIETLAAYNL-ASARKAGAPGIYVESGPHRGAKIAALGLKIRNGCSYHGLSVNVKMDLRPFLAINPCGYA 199          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_BURMA (Octanoyltransferase OS=Burkholderia mallei GN=lipB PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.249e-18
Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 1
Query:  124 SDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGD-----RKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIA 582
            +D +     D +  ++HPP YTLG+     +LL++++     G  L    RGG IT+HGP Q + Y ++ LR   L  R  V ++E  +IE  + Y + A   + G  GI+V        KI A+G++I+ G + HGL+ N+  DL  F  I PCG A
Sbjct:   24 TDARTPDTDDEIWVVEHPPVYTLGQAGNPAHLLVADS-----GVPLVKVDRGGQITYHGPGQIVAYLLVDLRRRKLMVRTLVTRIEEAVIETLAAYNL-ASARKAGAPGIYVESGPHRGAKIAALGLKIRNGCSYHGLSVNVKMDLRPFLAINPCGYA 175          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_BURM9 (Octanoyltransferase OS=Burkholderia mallei (strain NCTC 10229) GN=lipB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.249e-18
Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 1
Query:  124 SDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGD-----RKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIA 582
            +D +     D +  ++HPP YTLG+     +LL++++     G  L    RGG IT+HGP Q + Y ++ LR   L  R  V ++E  +IE  + Y + A   + G  GI+V        KI A+G++I+ G + HGL+ N+  DL  F  I PCG A
Sbjct:   48 TDARTPDTDDEIWVVEHPPVYTLGQAGNPAHLLVADS-----GVPLVKVDRGGQITYHGPGQIVAYLLVDLRRRKLMVRTLVTRIEEAVIETLAAYNL-ASARKAGAPGIYVESGPHRGAKIAALGLKIRNGCSYHGLSVNVKMDLRPFLAINPCGYA 199          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_BURM7 (Octanoyltransferase OS=Burkholderia mallei (strain NCTC 10247) GN=lipB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.249e-18
Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 1
Query:  124 SDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGD-----RKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIA 582
            +D +     D +  ++HPP YTLG+     +LL++++     G  L    RGG IT+HGP Q + Y ++ LR   L  R  V ++E  +IE  + Y + A   + G  GI+V        KI A+G++I+ G + HGL+ N+  DL  F  I PCG A
Sbjct:   48 TDARTPDTDDEIWVVEHPPVYTLGQAGNPAHLLVADS-----GVPLVKVDRGGQITYHGPGQIVAYLLVDLRRRKLMVRTLVTRIEEAVIETLAAYNL-ASARKAGAPGIYVESGPHRGAKIAALGLKIRNGCSYHGLSVNVKMDLRPFLAINPCGYA 199          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_PASMU (Octanoyltransferase OS=Pasteurella multocida GN=lipB PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.938e-18
Identity = 62/217 (28.57%), Postives = 110/217 (50.69%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISL-RDIGLG----ARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFGYDS 693
            L + +LGI +Y    +  +     R +    D +  +QHP  +T G+     +LL      ++    +  + RGG IT+HG  Q ++Y ++ + R   LG     R  V  LE  ++   + YG+ A P +    G+++ ++KI ++G+RI+ G + HGLA NI+ DL+ F  I PCG A  ++  L         + + +  +LV+ FA+  GY++
Sbjct:    7 LLVRQLGIQDYQTVWQQMQTFTDSRDVDT-QDEIWLVQHPAVFTQGQAGKAEHLL------QQTTIPVVQSDRGGQITYHGLGQQVMYVLVDIKRQKALGNEFNVRQLVSALEQAVVNTLADYGIHAYP-KADAPGVYIDEKKICSLGLRIRKGCSFHGLALNINMDLSPFHFINPCGYAGLEMCQLADFIDPQQASCEKVAPKLVAHFAQLLGYNA 215          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB1_PICTO (Probable octanoyltransferase 1 OS=Picrophilus torridus GN=lipB1 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.938e-18
Identity = 66/213 (30.99%), Postives = 107/213 (50.23%), Query Frame = 1
Query:   85 NYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIG-LGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGD----RKIGAIGVRIQYGITSHGLAFNIDPD-LNYFKHIVPCGI--ADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFGYDSLI 699
            +Y   L +Q +LVS RK   I +T++ ++H P YT+G++    N              +  T RGGDIT+HGP Q + Y I  +R  G    + ++  +E+  I +    G  A  G   E GIW+      +K+ +IG+ I   ++ HG+A NI+ + LN F  I PCG+  A  D   ++R+  I L   ++  E++   F  +  Y+ LI
Sbjct:   16 DYKKCLDIQYRLVSMRKNDLIGNTIIFVEHDPVYTIGRKADPRNY---------SNVNVIRTDRGGDITYHGPGQLVSYFIFDVRINGKKEVKTFLNNIENVYINLLKNLGYSASTGD--EPGIWIEKNGKLKKVASIGMAIDDYVSYHGVALNINKEVLNGFIKINPCGLPPAVMDYIDIKRDDAIDLIIREI--EKIYGKF-NKIEYEGLI 214          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_JANMA (Octanoyltransferase OS=Janthinobacterium sp. (strain Marseille) GN=lipB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.837e-18
Identity = 65/205 (31.71%), Postives = 104/205 (50.73%), Query Frame = 1
Query:   40 MKVPRSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLR----DIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGD-----RKIGAIGVRIQ-YGITSHGLAFNIDPDLNYFKHIVPCG---IADKDVTSLRRET 615
            M VP+   I + G+  Y        +  +D +    +D L  ++HPP +TLG      ++L            +  T RGG++T+HGP Q ++Y ++ LR    D  L AR  V K+E ++I+  + Y + AC  + G  GI++ D      KI A+G++I+  G T HG++ N+  DL  F  I PCG   +A  D+ SL  +T
Sbjct:    1 MSVPQQPLILQRGLEAYETTFAAM-RAFTDARTAATADELWIVEHPPVFTLGLAADPSHVLDPHQ------IPVVETDRGGEVTYHGPGQVVIYLLLDLRRHKADARLFARELVNKIEQSVIDTLAAYNL-ACERKPGAPGIYMSDGPAQGAKIAALGLKIRGNGCTYHGVSLNVAMDLTPFTWINPCGYEDLATIDMQSLGAQT 197          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_HAES1 (Octanoyltransferase OS=Haemophilus somnus (strain 129Pt) GN=lipB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.837e-18
Identity = 63/219 (28.77%), Postives = 110/219 (50.23%), Query Frame = 1
Query:   55 SLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLR-----DIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFGYDSL 696
            +L I +LGI +Y    + Q +  +D +     D +  +QHP  +T G+     +LL            +  + RGG IT+HG  Q I+Y +I ++        L  R  V  LE +++   + YG+K+ P +    G++V ++KI ++G+RI+ G + HGLA NI+ DL+ F+ I PCG    ++  +           D +  +LV+ F +  GY+ +
Sbjct:    5 TLIIRQLGIQDYQQVWQ-QMREFTDTRNALTPDEIWLVQHPAVFTQGQAGKPEHLL------NPTDIPVVQSDRGGQITYHGLGQQIMYVLIDIKRHKANGSELNVRQLVTALEQSVVSTLADYGIKSYP-KADAPGVYVNEQKICSLGLRIRKGCSFHGLALNINMDLSPFRQINPCGYIGLEMCQMADFIPTEQAQCDKVAPKLVTHFTQLLGYNDV 215          
The following BLAST results are available for this feature:
BLAST of DN621304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 436
Match NameE-valueIdentityDescription
LIPB_BURP12.249e-1834.81Octanoyltransferase OS=Burkholderia pseudomallei (... [more]
LIPB_BURP02.249e-1834.81Octanoyltransferase OS=Burkholderia pseudomallei (... [more]
LIPB_BURMS2.249e-1834.81Octanoyltransferase OS=Burkholderia mallei (strain... [more]
LIPB_BURMA2.249e-1834.81Octanoyltransferase OS=Burkholderia mallei GN=lipB... [more]
LIPB_BURM92.249e-1834.81Octanoyltransferase OS=Burkholderia mallei (strain... [more]
LIPB_BURM72.249e-1834.81Octanoyltransferase OS=Burkholderia mallei (strain... [more]
LIPB_PASMU2.938e-1828.57Octanoyltransferase OS=Pasteurella multocida GN=li... [more]
LIPB1_PICTO2.938e-1830.99Probable octanoyltransferase 1 OS=Picrophilus torr... [more]
LIPB_JANMA3.837e-1831.71Octanoyltransferase OS=Janthinobacterium sp. (stra... [more]
LIPB_HAES13.837e-1828.77Octanoyltransferase OS=Haemophilus somnus (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06I13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006I13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621304 ID=DN621304; Name=DN621304; organism=Citrus sinensis; type=EST; length=782bp
CCCCCTTCTCCTGACGGCCTGTATTTGTATTATCAGGGAATGAAAGTTCC
ACGGAGTTTACAGATCTGGAGACTGGGCATTGTCAACTACTCCGATGCAC
TTAAGCTGCAGGAAAAACTGGTCTCTGATAGAAAAATTCATAAGATTTCT
GATACCCTCTTGTCCCTTCAGCATCCACCCACGTATACCCTTGGAAAACG
GCGTACGGATCATAATTTATTAATTTCTGAGGCTGAACTGAAAAAGTTAG
GAGCTGAACTTCATTACACTCAGAGAGGAGGAGACATTACATTTCATGGT
CCCCACCAAGCAATTCTGTATCCCATTATTTCCCTTCGTGATATTGGACT
TGGTGCTCGAAATTATGTGGAGAAACTTGAGTCAACTATGATTGAAATAG
CATCACTATATGGAGTTAAAGCTTGCCCTGGACAAAAGGGTGAGACAGGA
ATTTGGGTTGGAGATAGAAAGATAGGTGCAATTGGAGTTCGGATACAATA
TGGAATTACTTCCCATGGGTTGGCATTCAACATAGATCCTGATTTGAACT
ATTTTAAGCATATCGTGCCTTGTGGGATTGCAGATAAAGATGTCACATCT
TTGAGAAGGGAGACAGGTATTCCGCTTCCTGCTGAAGATGTAATTCATGA
GCAGTTAGTTTCTTGTTTTGCTAGACAGTTTGGCTATGATAGTCTTATCT
GGAAGGATAATGTCTCAATATTGTCAGATAATTAGGAAGTCAATTGAGAT
GTATAGTATGCCTGGCAAATAAATCATGTAAA
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