DN621304

Overview
NameDN621304
Unique NameDN621304
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_CORGL (Octanoyltransferase OS=Corynebacterium glutamicum GN=lipB PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.963e-32
Identity = 74/206 (35.92%), Postives = 116/206 (56.31%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG------DRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQL 657
            ++I RLG+++Y +A   Q +L + R   +I D LL L+HP  YT GKR    +L  +       G  +    RGG IT+HGP Q ++YPII L D  +   +YV +LE  +I++    GV       G +G+WV       D K+ AIG+RI  G+  HG+A N +  L++++HI+PCGIAD  +++L RE    +  E+++   +
Sbjct:   22 IEIQRLGLIDYQEAWDYQAELATRRANDEIPDQLLILEHPSVYTAGKRTQPEDLPTN-------GLPVINADRGGRITWHGPGQLVIYPIIKLAD-PIDVVDYVRRLEEALIQVVGDMGVAGAGRIDGRSGVWVPAHDGWVDSKVAAIGIRITRGVAMHGVAINCNNTLDFYEHIIPCGIADAGLSTLSRELKRDVSVEELVEPSI 219          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_CORGB (Octanoyltransferase OS=Corynebacterium glutamicum (strain R) GN=lipB PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.963e-32
Identity = 74/206 (35.92%), Postives = 116/206 (56.31%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG------DRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQL 657
            ++I RLG+++Y +A   Q +L + R   +I D LL L+HP  YT GKR    +L  +       G  +    RGG IT+HGP Q ++YPII L D  +   +YV +LE  +I++    GV       G +G+WV       D K+ AIG+RI  G+  HG+A N +  L++++HI+PCGIAD  +++L RE    +  E+++   +
Sbjct:   22 IEIQRLGLIDYQEAWDYQAELATRRANDEIPDQLLILEHPSVYTAGKRTQPEDLPTN-------GLPVINADRGGRITWHGPGQLVIYPIIKLAD-PIDVVDYVRRLEEALIQVVGDMGVAGAGRIDGRSGVWVPAHDGWVDSKVAAIGIRITRGVAMHGVAINCNNTLDFYEHIIPCGIADAGLSTLSRELKRDVSVEELVEPSI 219          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_COREF (Octanoyltransferase OS=Corynebacterium efficiens GN=lipB PE=3 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.774e-31
Identity = 72/202 (35.64%), Postives = 111/202 (54.95%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG------DRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVI 645
            +++  LG V+Y D+  LQ  L   R   +I+D +L L+HP  YT GKR    +L  +       G  +    RGG IT+HGP Q ++YPII L +  +   +YV +LE  +I+    +GV       G +G+WV       D K+ A+G+R+  G+T HGLA N +  L ++ HI+ CGI D  +T+L RE G  +P  +++
Sbjct:   22 IEVQHLGTVDYRDSWDLQASLAEQRARDEIADQILVLEHPSVYTAGKRTQPEDLPTN-------GLPVIEVDRGGRITWHGPGQLVMYPIIKLAE-PIDVVDYVRRLEEALIQTVRTFGVPEAGRVDGRSGVWVPAHDGYPDSKVAALGIRVTRGVTMHGLALNCNNTLEFYDHIIACGIEDAGLTTLSRELGRDVPTTELV 215          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_TRIEI (Octanoyltransferase OS=Trichodesmium erythraeum (strain IMS101) GN=lipB PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.026e-31
Identity = 76/204 (37.25%), Postives = 116/204 (56.86%), Query Frame = 1
Query:   76 GIVNYSDALKLQEKLVSDR-KIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFG 684
            G+  YS A + Q  LV  R    +++D L+ L+HP  YTLG+      L     + K    ELH  +RGG++T+H P Q + YPI++L+        Y+ +LE  +I++  ++G+K      G TG+W+  RK+GAIG+++   IT HG A N+ P+L  F+ IVPCGI+DK V SL +   IP    D +   + + FA+ FG
Sbjct:   12 GLTKYSVAWEWQRSLVQQRHNCPELADVLILLEHPQVYTLGQGAKLDFLKFDPTQNKY---ELHRVERGGEVTYHCPGQLVGYPILNLKHYQQDLHWYLRQLEEVLIKVLDIFGLKG-ERYPGLTGVWLEGRKVGAIGIKVSRWITMHGFALNVSPNLEGFQRIVPCGISDKSVGSLAQ--FIPSITTDEVLPLVANAFAKVFG 209          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_GLOVI (Octanoyltransferase OS=Gloeobacter violaceus GN=lipB PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.026e-31
Identity = 77/205 (37.56%), Postives = 121/205 (59.02%), Query Frame = 1
Query:   76 GIVNYSDALKLQEKLVSDRKIHKIS-DTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSC-FARQFG 684
            G+V Y  A + Q +L++ R  H+   D L+ L+HPP YTLG+     ++L+  A +     EL+ T+RGG++T+HGP Q + YPI+ L         Y+  LE  +IE+ + +GV+    + G TG+W G RKI A+G+++   +T HG A N+DPDL+ F  IVPCG+     + ++   G+ +  E V  + +V+C FAR FG
Sbjct:   10 GLVPYLTAWEWQRQLMATRIAHRDRPDVLMLLEHPPVYTLGQGADAKHVLVDPASI-----ELYRTERGGEVTYHGPGQLVGYPILDLTGYRQDLHWYLRTLEQVLIEVLADFGVQG-EREAGFTGVWAGGRKIAALGIKVSRWVTMHGFALNVDPDLDAFARIVPCGLTRPVGSLVQLCPGVSV--EQV--QPVVACAFARVFG 204          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIP2P_ARATH (Plastidial lipoyltransferase 2 OS=Arabidopsis thaliana GN=LIP2p PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.952e-31
Identity = 78/214 (36.45%), Postives = 123/214 (57.48%), Query Frame = 1
Query:   79 IVNYSDALKLQEKLVSDRKI-----HKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEI-ASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLR-----RETGI--PLPAEDVIHEQLVSCFARQF 681
            +V Y  A   Q+ +V ++K         +DT++ LQH P YT+G   T+  L     ++K     ++ T+RGG++T+HGP Q ++YPII+LR+  +    Y+  LE  +I + +S + +KA     G TG+WVG++K+ AIG+R+   IT HGLA N+  DL  F  IVPCGI D+ V +++      E G+   L   D++HE L+  F+  F
Sbjct:   54 LVPYKKAWSWQKSIVEEKKTLIDRNQDCADTVILLQHSPVYTMGTASTEDYL---NFDIKDAPFNVYRTERGGEVTYHGPGQLVMYPIINLRNHEMDLHWYLRMLEEIVIRVLSSTFSIKASR-LDGLTGVWVGNQKVAAIGIRVSKWITYHGLALNVTTDLTPFNWIVPCGIRDRKVGNIKGLLEDGEHGMVDDLRLIDIVHESLLKEFSEAF 263          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_THEEB (Octanoyltransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=lipB PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.162e-31
Identity = 80/209 (38.28%), Postives = 124/209 (59.33%), Query Frame = 1
Query:   73 LGIVNYSDALKLQEKLVSDRKIHKIS-DTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQK--GETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFGYD 690
            LGI+ Y DA + Q++LV++R+ +  + D LL+L+HP  YTLG+  T  ++          G E+   +RGGD+T+H P Q + YPI++LR        Y+ +LE  +I+    YG+K   G++  G TG+WV   K+ AIG+++   I+ HG+A N+  DL  F  IVPCGI D+ V +LR+     +  EDV  +Q V+ F+R FG +
Sbjct:   11 LGIIPYRDAWRWQQQLVAERRQNLAAPDVLLTLEHPAIYTLGQGATTAHIHFDPVAT---GIEVLRIERGGDVTYHCPGQLVAYPILNLRRHCCDLHWYLHQLEEVIIQTLRHYGIK---GERVAGLTGVWVEGYKVAAIGIKVTRWISFHGIALNVVNDLKGFGRIVPCGIGDRPVGNLRQFCA-DIQLEDV-RQQFVAAFSRVFGLE 211          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_DESAD (Octanoyltransferase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=lipB PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.805e-31
Identity = 73/204 (35.78%), Postives = 116/204 (56.86%), Query Frame = 1
Query:   73 LGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFG 684
            LG++ + +A ++Q + +         D L  L+HPP  TLG++    NLLISE  LK +GAE+  T RGG+IT H P Q ++YP++ +     G + +   +E T I  A+ +GV+A   + G  G+WVG  K+ +IG+ ++  IT HGL+FN+  D+  F  I  CG+     TSL RE G     +++  E++ + F  +FG
Sbjct:    6 LGLIPHGEAERIQLERLKQVMEGTAEDALYLLEHPPVVTLGRQGGLENLLISEEALKAMGAEVVQTARGGNITCHYPGQMVVYPVMRIEKRRGGIKKFFFDMEETAIRTAARFGVQAARSE-GRPGVWVGPGKLCSIGIGVKKWITYHGLSFNVSSDMKLFDAITLCGLHGAHPTSLSREAG-----KEISTEEVKNVFREEFG 203          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_ROSS1 (Octanoyltransferase OS=Roseiflexus sp. (strain RS-1) GN=lipB PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.150e-30
Identity = 79/222 (35.59%), Postives = 119/222 (53.60%), Query Frame = 1
Query:   52 RSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIA---SLYGVKACPGQKGETGIWV--GDRKIGAIGVRIQY-GITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFGYDSLI 699
            R+L I+ LG+++Y  A  +Q ++   R   ++ DTLL L+HPPT TLG R +  +LL+    L   G  +  + RGG  T+H P Q + YPI  L   G     Y+  LE ++I +     L G +      G TG+WV  G  KI AIG+++   G+T+HGLA N++ DL  F  IVPCG+  + VTS+  E G  + A   + E+L+      F  +  +
Sbjct:    2 RTLTIYHLGLIDYRTAWDVQRRIARARSAGQVGDTLLLLEHPPTITLGSRASTEHLLVPAEHLSAEGVTVVQSDRGGGATYHAPGQIVAYPIFKLLQHGRDIGRYLRGLEESVIRVLRDDGLIGERV----PGLTGVWVRNGAAKICAIGIKVSAGGVTTHGLALNVNIDLRGFDLIVPCGVHGRGVTSMSAELG-EVVAMSSVAERLIGHLCAVFDLEPAV 218          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_MYCLE (Octanoyltransferase OS=Mycobacterium leprae GN=lipB PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.502e-30
Identity = 84/205 (40.98%), Postives = 110/205 (53.66%), Query Frame = 1
Query:   46 VPRSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGD------RKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDV 642
            +P ++ + +LG V+Y  A +LQ  L +D ++    DTLL LQHPP YT G+R   H            G  +  T RGG IT+HGP Q + YPII L +  L   NYV +LE  +I++ +  G+       G +GIWV        RKI AIGVR+    T HG A N   DL+ F  IVPCGI+D  VTSL  E G  +   DV
Sbjct:    7 IPTAIDVRQLGTVDYHIAWQLQRDL-ADARVAGGPDTLLLLQHPPVYTAGRRTQPHE----RPNPSLHGVPVVETDRGGKITWHGPGQLVGYPIIGLAE-PLDVVNYVRRLEEALIKVCAELGLDTSR-VNGRSGIWVPGSAGQPARKIAAIGVRVSRATTMHGFALNCQCDLDAFHAIVPCGISDAGVTSLSAELGRTVAVNDV 204          
The following BLAST results are available for this feature:
BLAST of DN621304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 436
Match NameE-valueIdentityDescription
LIPB_CORGL7.963e-3235.92Octanoyltransferase OS=Corynebacterium glutamicum ... [more]
LIPB_CORGB7.963e-3235.92Octanoyltransferase OS=Corynebacterium glutamicum ... [more]
LIPB_COREF1.774e-3135.64Octanoyltransferase OS=Corynebacterium efficiens G... [more]
LIPB_TRIEI3.026e-3137.25Octanoyltransferase OS=Trichodesmium erythraeum (s... [more]
LIPB_GLOVI3.026e-3137.56Octanoyltransferase OS=Gloeobacter violaceus GN=li... [more]
LIP2P_ARATH3.952e-3136.45Plastidial lipoyltransferase 2 OS=Arabidopsis thal... [more]
LIPB_THEEB5.162e-3138.28Octanoyltransferase OS=Thermosynechococcus elongat... [more]
LIPB_DESAD8.805e-3135.78Octanoyltransferase OS=Desulfovibrio salexigens (s... [more]
LIPB_ROSS11.150e-3035.59Octanoyltransferase OS=Roseiflexus sp. (strain RS-... [more]
LIPB_MYCLE1.502e-3040.98Octanoyltransferase OS=Mycobacterium leprae GN=lip... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06I13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006I13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621304 ID=DN621304; Name=DN621304; organism=Citrus sinensis; type=EST; length=782bp
CCCCCTTCTCCTGACGGCCTGTATTTGTATTATCAGGGAATGAAAGTTCC
ACGGAGTTTACAGATCTGGAGACTGGGCATTGTCAACTACTCCGATGCAC
TTAAGCTGCAGGAAAAACTGGTCTCTGATAGAAAAATTCATAAGATTTCT
GATACCCTCTTGTCCCTTCAGCATCCACCCACGTATACCCTTGGAAAACG
GCGTACGGATCATAATTTATTAATTTCTGAGGCTGAACTGAAAAAGTTAG
GAGCTGAACTTCATTACACTCAGAGAGGAGGAGACATTACATTTCATGGT
CCCCACCAAGCAATTCTGTATCCCATTATTTCCCTTCGTGATATTGGACT
TGGTGCTCGAAATTATGTGGAGAAACTTGAGTCAACTATGATTGAAATAG
CATCACTATATGGAGTTAAAGCTTGCCCTGGACAAAAGGGTGAGACAGGA
ATTTGGGTTGGAGATAGAAAGATAGGTGCAATTGGAGTTCGGATACAATA
TGGAATTACTTCCCATGGGTTGGCATTCAACATAGATCCTGATTTGAACT
ATTTTAAGCATATCGTGCCTTGTGGGATTGCAGATAAAGATGTCACATCT
TTGAGAAGGGAGACAGGTATTCCGCTTCCTGCTGAAGATGTAATTCATGA
GCAGTTAGTTTCTTGTTTTGCTAGACAGTTTGGCTATGATAGTCTTATCT
GGAAGGATAATGTCTCAATATTGTCAGATAATTAGGAAGTCAATTGAGAT
GTATAGTATGCCTGGCAAATAAATCATGTAAA
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