DN621304

Overview
NameDN621304
Unique NameDN621304
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_AERHH (Octanoyltransferase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=lipB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.773e-15
Identity = 59/203 (29.06%), Postives = 98/203 (48.28%), Query Frame = 1
Query:  115 KLVSDRKIHKISDTLLSLQHPPTYTLGKR-RTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKA-----CPG--QKGETGIWV-GDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFGYDSL 696
            K  +D +     D    ++H P YT G+  + +H L   +  + +       + RGG +T+HGP Q +LY ++ +R   L  R  V  LE+ +I   +  G++A      PG   K + G  +  + K+ ++G+RI+ G + HGLA N++ D+  F  I PCG A   +T      G    AE      LV+  A   GY+++
Sbjct:   34 KAFTDSRTPDTPDEFWVVEHDPVYTQGQAGKAEHLLAPGDIPVVQ-------SDRGGQVTYHGPGQLVLYVLVDVRRSKLTVRELVTCLETAIINTLAKSGIEAYAKPDAPGVYVKNQLGAALQTEAKLASLGLRIRKGCSFHGLALNVNMDMTPFLRINPCGYAGMAMTQTSALGGPQSVAE--AQAMLVAELASLIGYETI 227          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_YEAST (Octanoyltransferase, mitochondrial OS=Saccharomyces cerevisiae GN=LIP2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.155e-14
Identity = 62/232 (26.72%), Postives = 105/232 (45.26%), Query Frame = 1
Query:  112 EKLVSDRKIH-KISDTLLSLQHPPTYTLGKRRTD---------HNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDI-GLGARNYVEKLESTMIEIASLYGVKACPGQKG----------ETGIWV--GDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFGYDSL--IWKDNVSILSDN 732
            EK + D+ +  K +  +L+ +  PTYT GKR            +   I E +      +    +RGG +TFHGP Q ++Y I+ L+      A+  V  +E   I   +L   K C               +TG+WV  G +K+ ++G+ ++  ITSHG+A N++ DL+Y      CG+ +   TS+  +    +     +    V    +  G  +L  +  D+V+IL  N
Sbjct:   98 EKRILDKVMAMKPNPIILTFEFEPTYTGGKRIKKTMTPDQIAAYESFIPETQKDNPRPKFVQVERGGQVTFHGPGQIVIYIILDLKTFQSFPAKCLVSCIEQATIR--TLKNTKMCDDTDKPLNLDAMTTKDTGVWVENGKKKVASVGIHVRRSITSHGVAINVNTDLSYMNSFEMCGLKNTLTTSIMEQRPDAVVNVQSVAISFVKEMTKLLGIKTLERMQIDDVNILKKN 327          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_VARPS (Octanoyltransferase OS=Variovorax paradoxus (strain S110) GN=lipB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.155e-14
Identity = 58/200 (29.00%), Postives = 87/200 (43.50%), Query Frame = 1
Query:   73 LGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLG-KRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWV----------------------GDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSL 603
            LG  +Y+      ++   +R + +  D L   +H P +T G   R DH L      + +       T RGG +TFHGP Q + YP+I LR  G   + YV ++E +++   + +GV       G  GI+V                      G  KI A+G+++    T HG+A N+  DL  F  I PCG A      L
Sbjct:   10 LGAADYAATYGAMKQFTLER-LPETPDALWICEHAPVFTQGIAGRQDHILNPGAIPVVQ-------TDRGGQVTFHGPGQVVAYPLIDLRRAGYFVKEYVYRIEESVLRTLAHFGVTG-HRVAGAPGIYVRLDDPFSHAALTGPLPAGDPFRGLGKIAALGIKVSRHATYHGVALNVAMDLEPFSRINPCGYAGLQTVDL 200          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_AERS4 (Octanoyltransferase OS=Aeromonas salmonicida (strain A449) GN=lipB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.509e-14
Identity = 58/205 (28.29%), Postives = 97/205 (47.32%), Query Frame = 1
Query:  115 KLVSDRKIHKISDTLLSLQHPPTYTLGKR-RTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDR-----KIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFGYDSLIWKDN 711
            K  +D +     D    ++H P YT G+  + +H L   +  + +       + RGG +T+HGP Q +LY ++ +R   L  R  V  LE+ +I   +   ++A   +    G++V +      K+ ++G+RI+ G + HGLA NI+ D+  F  I PCG A   +T      G    AE      LV+  A   GY ++   D+
Sbjct:   29 KAFTDNRTSDTPDEFWVVEHDPVYTQGQAGKAEHLLAPGDIPVVQ-------SDRGGQVTYHGPGQLVLYVLVDVRRSKLSVRELVTCLETAIINTLAKSDIQAY-AKADAPGVYVTNELGMEAKLASLGLRIRKGCSFHGLALNINMDMTPFLRINPCGYAGMAMTQTSALGGPQSVAE--AQAILVAELASLIGYQTITNADD 223          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_RHOFD (Octanoyltransferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=lipB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.179e-13
Identity = 58/206 (28.16%), Postives = 86/206 (41.75%), Query Frame = 1
Query:   70 RLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAE--LKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWV--------------------------GDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSL 603
            RLG ++Y  A +  +   + R   +  D L   +HPP YT G        L  +AE         +  T RGG +T+HGP Q + YP++ L+  G   + YV ++E  +I     +GV       G  GI+V                          G  KI A+G+++    T HG+A N+  DL  +  I PCG A      L
Sbjct:    9 RLGRIDYLPAYEAMQVFTAART-PETPDELWICEHPPVYTQG--------LAGKAEHVFNPGTIPVVQTNRGGQVTYHGPGQVVAYPLLDLKRAGYFIKEYVYRIEEAVIRTLVEFGVTG-HRVAGAPGIYVRLDDPGSHALLPQRPMKSGLANPSFGGLGKIAALGLKVSRNCTYHGVALNVAMDLEPYTRINPCGYAGLQTVDL 204          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_PROHO (Octanoyltransferase (Fragment) OS=Prochlorothrix hollandica GN=lipB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 36/107 (33.64%), Postives = 58/107 (54.21%), Query Frame = 1
Query:  145 ISDTLLSLQHPPTYTLGKRRTDHNLLIS---------------EAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVK 420
            ++DTLL L+HPP YTLG+  +   +  +               E    + G ELH T+RGG++T+H P Q + YPI++LR +      Y+ +LE  +I +   YG++
Sbjct:   10 LADTLLLLEHPPVYTLGRGSSLDFIKFTPPASFTAGVTPSSRAEPTPPQPGPELHRTERGGEVTYHCPGQLVGYPILNLRRLSADLHWYLRQLEEYLIRVLDHYGLR 116          
The following BLAST results are available for this feature:
BLAST of DN621304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 436
Match NameE-valueIdentityDescription
LIPB_AERHH6.773e-1529.06Octanoyltransferase OS=Aeromonas hydrophila subsp.... [more]
LIPB_YEAST1.155e-1426.72Octanoyltransferase, mitochondrial OS=Saccharomyce... [more]
LIPB_VARPS1.155e-1429.00Octanoyltransferase OS=Variovorax paradoxus (strai... [more]
LIPB_AERS41.509e-1428.29Octanoyltransferase OS=Aeromonas salmonicida (stra... [more]
LIPB_RHOFD2.179e-1328.16Octanoyltransferase OS=Rhodoferax ferrireducens (s... [more]
LIPB_PROHO7.749e-1133.64Octanoyltransferase (Fragment) OS=Prochlorothrix h... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06I13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006I13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621304 ID=DN621304; Name=DN621304; organism=Citrus sinensis; type=EST; length=782bp
CCCCCTTCTCCTGACGGCCTGTATTTGTATTATCAGGGAATGAAAGTTCC
ACGGAGTTTACAGATCTGGAGACTGGGCATTGTCAACTACTCCGATGCAC
TTAAGCTGCAGGAAAAACTGGTCTCTGATAGAAAAATTCATAAGATTTCT
GATACCCTCTTGTCCCTTCAGCATCCACCCACGTATACCCTTGGAAAACG
GCGTACGGATCATAATTTATTAATTTCTGAGGCTGAACTGAAAAAGTTAG
GAGCTGAACTTCATTACACTCAGAGAGGAGGAGACATTACATTTCATGGT
CCCCACCAAGCAATTCTGTATCCCATTATTTCCCTTCGTGATATTGGACT
TGGTGCTCGAAATTATGTGGAGAAACTTGAGTCAACTATGATTGAAATAG
CATCACTATATGGAGTTAAAGCTTGCCCTGGACAAAAGGGTGAGACAGGA
ATTTGGGTTGGAGATAGAAAGATAGGTGCAATTGGAGTTCGGATACAATA
TGGAATTACTTCCCATGGGTTGGCATTCAACATAGATCCTGATTTGAACT
ATTTTAAGCATATCGTGCCTTGTGGGATTGCAGATAAAGATGTCACATCT
TTGAGAAGGGAGACAGGTATTCCGCTTCCTGCTGAAGATGTAATTCATGA
GCAGTTAGTTTCTTGTTTTGCTAGACAGTTTGGCTATGATAGTCTTATCT
GGAAGGATAATGTCTCAATATTGTCAGATAATTAGGAAGTCAATTGAGAT
GTATAGTATGCCTGGCAAATAAATCATGTAAA
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