DN621304

Overview
NameDN621304
Unique NameDN621304
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_NOCFA (Octanoyltransferase OS=Nocardia farcinica GN=lipB PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.406e-28
Identity = 74/197 (37.56%), Postives = 114/197 (57.87%), Query Frame = 1
Query:   73 LGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQ-KGETGIWV------GDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDV 642
            LG+++Y  A +LQ  + ++R     SD LL L+HP  YT G+R  D +L I        G+ +    RGG IT+HGP Q + YPI+ L +  +   +YV +LE  +I + +  G+    G+ +G +G+W+       +RKI AIG+R+Q G+  HG++FN +  L+ F+ IVPCGI D  VT+L RE G  +   +V
Sbjct:   22 LGLIDYHAAWELQRTIAAERAEGAGSDRLLLLEHPSVYTAGRRTEDADLPID-------GSPVVQVDRGGKITWHGPGQLVGYPIVRLAE-PVDVVDYVRRLEEALISVCTELGLTV--GRVEGRSGVWLPATETLAERKIAAIGIRVQRGVALHGISFNCNSALDGFQAIVPCGIQDAGVTTLTRELGREVTVAEV 208          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_GEOMG (Octanoyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=lipB PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.406e-28
Identity = 73/195 (37.44%), Postives = 104/195 (53.33%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDV 642
            + I  LG + +  AL +QE+L +        +TLL L+HPP YT+G+     N+L         G  +    RGGD+TFHGP Q + YP+I L   G     Y+  LE  +I +A+ +GV A   + G TGIW    K+ +IGV ++  +T HG A N+  +L  F+ I PCGI    +TSL    G P+P  DV
Sbjct:    1 MMIRDLGKLEFEAALAIQEQLAAGVAAGTSPETLLLLEHPPVYTIGRGGCRENVLDP-------GIRVVEANRGGDVTFHGPGQLVGYPVIDLGRRGRDLHRYLRILEELLINVAAEFGV-AARREPGRTGIWTDGGKLASIGVGVRRWVTMHGFALNVTNELAPFRSINPCGIVACPITSLSAILGRPVPLGDV 187          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_ANAVT (Octanoyltransferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=lipB PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.406e-28
Identity = 74/211 (35.07%), Postives = 116/211 (54.98%), Query Frame = 1
Query:   55 SLQIWRLGIVNYSDALKLQEKLVSDRKIH-KISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFG 684
            S  ++  G++ Y +A   Q  L+  R  +  + D L+ L+HPP YTLG+     +L   + +  +   E+H  +RGG++T+H P Q + YPI++LR        Y+ +LE  +I + ++YG+K        TG+W+  RK+ AIG+++   IT HG A N+ PD+  F  IVPCGI DK V SL +   IP    + +   +V  FA  FG
Sbjct:   11 SCLLYNKGLMPYLEAHAWQRSLLHQRIDYPNLEDVLILLEHPPVYTLGQ---GSSLEFLKFDPNQSEFEIHRIERGGEVTYHCPGQLVGYPILNLRRHRQDLHWYLRQLEEVIIRVLAVYGLKG-DRLPSLTGVWLEGRKVAAIGIKVSRWITMHGFALNVCPDMTGFGRIVPCGITDKPVGSLAQ--WIPGITCEEVRVHVVQAFAEVFG 215          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_GEOUR (Octanoyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=lipB PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.132e-28
Identity = 65/187 (34.76%), Postives = 105/187 (56.15%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETG 618
            + I  LG++++ +A  +QE+L ++      ++TLL L+HPP YT+G    + N+L +  E++++        RGGD+T+HGP Q + YP+I L   G     Y+  +E  ++ + + + V A     G TG+W    K+ +IGV ++  +T HG A N+  DL  F  I PCG+A   VTSL  E G
Sbjct:    1 MNIIDLGLIDFDEAYSIQERLAAEVFAGSGAETLLLLEHPPVYTIGSGGDEGNILDTAIEVRRIN-------RGGDVTYHGPGQLVGYPVIDLARRGCDLHRYLRFIEELLMLVVADFRVAAFRSP-GRTGVWTDQGKLASIGVGVRRWVTMHGFALNVTTDLTPFTRINPCGMAGCPVTSLEAEVG 179          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_ARTCA (Octanoyltransferase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=lipB PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.132e-28
Identity = 74/193 (38.34%), Postives = 104/193 (53.89%), Query Frame = 1
Query:   82 VNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG------DRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDV 642
            V+Y  A  +Q +L       +   T+L L+H   YT GK   DH            G  +    RGG +T+HGP Q I YPI+ L++   G R+YVE+LE+ MI + + YG++A    KG  G+WV       DRKI AIG+R+  G+T HG+A N   DL  +  I+ CGI D  VT++ RETG  +   D+
Sbjct:   15 VDYQHAWDVQRELHGKVVAGEAPSTVLLLEHAAVYTAGKLTEDHERPFD-------GTPVVAVDRGGKLTWHGPGQLIAYPILKLKNRA-GIRDYVERLEAVMIAVMADYGIRA-ERIKGRAGVWVKADANGPDRKIAAIGIRVLNGVTMHGVAINCSNDLAPYGQIIACGITDAGVTTMSRETGKDIRPADI 198          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_MYCVP (Octanoyltransferase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=lipB PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.111e-28
Identity = 82/203 (40.39%), Postives = 111/203 (54.68%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQ-KGETGIWVGD------RKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVI 645
            +Q+ +LG V+Y  A  LQ + +++ +     DTLL LQHP  YT G+R           E    G  +  T RGG IT+HGP Q + YPII L +  L   N+V +LE ++I + +  G+    G+ +G +G+WV        RKI AIG+R+  G T HG A N D DLN F  IVPCGI D  VTSL  E G  +   +VI
Sbjct:   18 VQVRKLGTVDYLAAWDLQRE-IAEARAEGGPDTLLLLQHPAVYTAGRRTLPE-------ERPADGTPVIDTDRGGKITWHGPGQLVGYPIIGLAE-PLDVVNFVRRLEESLITVCAELGLPT--GRVEGRSGVWVEADGVRPARKIAAIGIRVARGTTLHGFALNCDCDLNAFGSIVPCGIRDAGVTSLTAEMGRTVGVGEVI 209          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_MYCMM (Octanoyltransferase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=lipB PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.111e-28
Identity = 81/206 (39.32%), Postives = 115/206 (55.83%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHN----LLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQ-KGETGIWVG------DRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDV 642
            + + +LG V+Y  A ++Q  L +D ++    DTLL LQHP  YT G+R   H     +    A  + +  ++  T RGG IT+HGP Q + YPII L    L   NYV +LE ++I++    G++   G+ +G +G+W+       +RKI AIGVR+    T HG A N D DL  F  IVPCGI+D  VTSL  E G  +  E+V
Sbjct:   12 IDVRQLGSVDYQTAWQMQRDL-ADARVAGGPDTLLLLQHPAVYTAGRRTEPHERPGPVFAGAAGAEAI--DVVDTDRGGKITWHGPGQLVGYPIIGLAQ-PLDVVNYVRRLEESLIKVCLDLGLET--GRVEGRSGVWIPAGSGRPERKIAAIGVRVSRATTLHGFALNCDCDLAAFTAIVPCGISDAGVTSLSAELGRTVGVEEV 211          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_DESDA (Octanoyltransferase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=lipB PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.111e-28
Identity = 70/186 (37.63%), Postives = 101/186 (54.30%), Query Frame = 1
Query:   73 LGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLP 630
            LG   Y DA  LQ K V         D LL L+HPPT ++GK     N+     ++     ++ ++ RGG++T H P Q + YP+ISL+    G R YV  LE   I + + +GV A   Q G  G+W G+RKI ++G+ +   +T HG+A N+  DL+ F  I PCG+     TS+ RET  P+P
Sbjct:    6 LGRTGYEDAFTLQ-KQVQAMVQSGGDDILLLLEHPPTVSIGKNSGAENVPPHLQDMWNGHVDIVHSTRGGNVTCHFPGQLVAYPVISLKKRSGGIRAYVHDLEEAAIRMLARFGVTAARRQ-GFPGVWTGERKIASLGIAVSRYVTMHGMALNVAEDLSLFNIISPCGLEGVAATSIARETAGPVP 189          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_ARTAT (Octanoyltransferase OS=Arthrobacter aurescens (strain TC1) GN=lipB PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 9.111e-28
Identity = 75/207 (36.23%), Postives = 110/207 (53.14%), Query Frame = 1
Query:   55 SLQIWRLGI----VNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWV------GDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVI 645
            +L+  +LG+    V+Y     LQ  + +     + + T+L L+H   YT GK   DH            G  +    RGG +T+HGP Q I YPI+ L++   G R+YVE+LE+ MI +   YG+KA    KG  G+W+       DRKI AIG+R+  G+T HG+A N   DL  +  I+ CGI D  VT++  ETG  +   D++
Sbjct:    2 TLEFSQLGLAPDFVDYMQGWDLQRDIHNKVVAGEKNSTVLILEHAAVYTAGKLTEDHERPFD-------GTPVVPVDRGGKLTWHGPGQLIAYPILKLKNRA-GIRDYVERLEAIMIAVMQDYGIKAVT-VKGRAGVWILADDKGPDRKIAAIGIRVLDGVTMHGVAINCSNDLAPYAQIIACGITDASVTTMSLETGRTINPADIV 199          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_XANCP (Octanoyltransferase OS=Xanthomonas campestris pv. campestris GN=lipB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.190e-27
Identity = 73/213 (34.27%), Postives = 117/213 (54.93%), Query Frame = 1
Query:   46 VPRSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFG 684
            +P   Q+  LG+ +Y+   +  ++    R  H   D L  ++H P +TLG+     ++L +  E+  L  +     RGG +T+HGP Q ++YP++ LR + +G R+YV K+E  +I+    + + A   + G  G++VG  KI A+G+R++ G T HGL+FN+  DL  F  I PCG  D  VTS+  + G P    D +   L+   ARQFG
Sbjct:   14 LPLPAQVRDLGMQDYAPVWRAMQRFTDTRDEHT-GDELWVVEHTPVFTLGQAGKPEHVL-APGEIPVLQVD-----RGGQVTYHGPGQLVVYPLLDLRRLKIGVRDYVCKIEQALIDTLDEWNIVA-ERRDGAPGVYVGGAKIAALGIRVRRGCTFHGLSFNVAMDLEPFHRINPCGYQDLQVTSV-LDLGGP-SGMDAVKAVLLDQLARQFG 216          
The following BLAST results are available for this feature:
BLAST of DN621304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 436
Match NameE-valueIdentityDescription
LIPB_NOCFA1.406e-2837.56Octanoyltransferase OS=Nocardia farcinica GN=lipB ... [more]
LIPB_GEOMG1.406e-2837.44Octanoyltransferase OS=Geobacter metallireducens (... [more]
LIPB_ANAVT1.406e-2835.07Octanoyltransferase OS=Anabaena variabilis (strain... [more]
LIPB_GEOUR3.132e-2834.76Octanoyltransferase OS=Geobacter uraniireducens (s... [more]
LIPB_ARTCA3.132e-2838.34Octanoyltransferase OS=Arthrobacter chlorophenolic... [more]
LIPB_MYCVP9.111e-2840.39Octanoyltransferase OS=Mycobacterium vanbaalenii (... [more]
LIPB_MYCMM9.111e-2839.32Octanoyltransferase OS=Mycobacterium marinum (stra... [more]
LIPB_DESDA9.111e-2837.63Octanoyltransferase OS=Desulfovibrio desulfuricans... [more]
LIPB_ARTAT9.111e-2836.23Octanoyltransferase OS=Arthrobacter aurescens (str... [more]
LIPB_XANCP1.190e-2734.27Octanoyltransferase OS=Xanthomonas campestris pv. ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06I13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006I13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621304 ID=DN621304; Name=DN621304; organism=Citrus sinensis; type=EST; length=782bp
CCCCCTTCTCCTGACGGCCTGTATTTGTATTATCAGGGAATGAAAGTTCC
ACGGAGTTTACAGATCTGGAGACTGGGCATTGTCAACTACTCCGATGCAC
TTAAGCTGCAGGAAAAACTGGTCTCTGATAGAAAAATTCATAAGATTTCT
GATACCCTCTTGTCCCTTCAGCATCCACCCACGTATACCCTTGGAAAACG
GCGTACGGATCATAATTTATTAATTTCTGAGGCTGAACTGAAAAAGTTAG
GAGCTGAACTTCATTACACTCAGAGAGGAGGAGACATTACATTTCATGGT
CCCCACCAAGCAATTCTGTATCCCATTATTTCCCTTCGTGATATTGGACT
TGGTGCTCGAAATTATGTGGAGAAACTTGAGTCAACTATGATTGAAATAG
CATCACTATATGGAGTTAAAGCTTGCCCTGGACAAAAGGGTGAGACAGGA
ATTTGGGTTGGAGATAGAAAGATAGGTGCAATTGGAGTTCGGATACAATA
TGGAATTACTTCCCATGGGTTGGCATTCAACATAGATCCTGATTTGAACT
ATTTTAAGCATATCGTGCCTTGTGGGATTGCAGATAAAGATGTCACATCT
TTGAGAAGGGAGACAGGTATTCCGCTTCCTGCTGAAGATGTAATTCATGA
GCAGTTAGTTTCTTGTTTTGCTAGACAGTTTGGCTATGATAGTCTTATCT
GGAAGGATAATGTCTCAATATTGTCAGATAATTAGGAAGTCAATTGAGAT
GTATAGTATGCCTGGCAAATAAATCATGTAAA
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