DN621304

Overview
NameDN621304
Unique NameDN621304
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_XANC8 (Octanoyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=lipB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.190e-27
Identity = 73/213 (34.27%), Postives = 117/213 (54.93%), Query Frame = 1
Query:   46 VPRSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFG 684
            +P   Q+  LG+ +Y+   +  ++    R  H   D L  ++H P +TLG+     ++L +  E+  L  +     RGG +T+HGP Q ++YP++ LR + +G R+YV K+E  +I+    + + A   + G  G++VG  KI A+G+R++ G T HGL+FN+  DL  F  I PCG  D  VTS+  + G P    D +   L+   ARQFG
Sbjct:   14 LPLPAQVRDLGMQDYAPVWRAMQRFTDTRDEHT-GDELWVVEHTPVFTLGQAGKPEHVL-APGEIPVLQVD-----RGGQVTYHGPGQLVVYPLLDLRRLKIGVRDYVCKIEQALIDTLDEWNIVA-ERRDGAPGVYVGGAKIAALGIRVRRGCTFHGLSFNVAMDLEPFHRINPCGYQDLQVTSV-LDLGGP-SGMDAVKAVLLDQLARQFG 216          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_MYCUA (Octanoyltransferase OS=Mycobacterium ulcerans (strain Agy99) GN=lipB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.190e-27
Identity = 79/203 (38.92%), Postives = 111/203 (54.68%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLL--ISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG------DRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDV 642
            + + +LG V+Y  A ++Q  L +D ++    DTLL LQHP  YT G+R   H     +          ++  T RGG IT+HGP Q + YPII L    L   NYV +LE ++I+++   G++     +G +G+W+       +RKI AIGVR+    T HG A N D DL  F  IVPCGI+D  VTSL  E G  +  E+V
Sbjct:   12 IDVRQLGSVDYQTAWQMQRDL-ADARVAGGPDTLLLLQHPAVYTAGRRTEPHERPGPVFAGAAGDEAIDVVDTDRGGKITWHGPGQLVGYPIIRLAQ-PLDVVNYVRRLEESLIKVSLDLGLET-RRVEGRSGVWIPAGSGRPERKIAAIGVRVSRATTLHGFALNCDCDLAAFTAIVPCGISDAGVTSLSAELGRTVGVEEV 211          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_GEOBB (Octanoyltransferase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=lipB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.190e-27
Identity = 67/190 (35.26%), Postives = 107/190 (56.32%), Query Frame = 1
Query:   73 LGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDV 642
            +G++ Y++AL++QE+LV++ +     + LL L+H P YT+G      N+L  E E  ++        RGGD+T+HGP Q + YPI+ L   G     Y+  LE  ++E+ +  GV  C    G TG+W G+ K+ +IGV ++  ++ HG A N+ PD   F  I PCG+    +TSL  E G  L  +++
Sbjct:    6 VGVIGYAEALRIQEQLVAEVQ-QGGEEALLLLEHLPVYTIGAGGDRGNVLDPELEPVRVN-------RGGDVTYHGPGQLVCYPILDLSRRGRDLHRYLRFLERFLVELCAGLGV-GCHTVPGRTGVWTGNGKLASIGVGVRRWVSMHGFALNVSPDTAPFSRINPCGMPGCSITSLSLELGEELFVDEL 186          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_CORA7 (Octanoyltransferase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=lipB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.190e-27
Identity = 73/207 (35.27%), Postives = 107/207 (51.69%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG-------------DRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAED 639
            L+I RLG + Y +A  LQ ++ + R      D +L ++HP  YT GKR           ++   G  +    RGG IT+HG  Q ++YPII L +  +   +YV +LE  +I+     GV       G +G+WV              DRK+GA+G+R+  G+T HGLA N    L Y++HIV CGI D DV++L  E G  +  E+
Sbjct:   22 LEIRRLGRMGYQEAWDLQAEIAAARAAGTQGDVILVVEHPNVYTAGKRTQPE-------DMPDNGLPVIDVDRGGRITWHGEGQLVVYPIIKLAE-PVDVVDYVRRLEEAIIQAVRELGVSTAGRIDGRSGVWVPSTTQAADPAAPKRDRKLGALGIRVTRGVTMHGLALNCTNTLEYYEHIVACGIDDADVSTLSLELGREVTMEE 220          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_RHOSR (Octanoyltransferase OS=Rhodococcus sp. (strain RHA1) GN=lipB PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.554e-27
Identity = 75/209 (35.89%), Postives = 110/209 (52.63%), Query Frame = 1
Query:   49 PRSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKL-GAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVG----------DRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDV 642
            P  + +  LG + Y DA   Q +L ++R  +  +DTLL L+HP  YT G+R        +E E +   G  +    RGG IT+HGP Q + YPI+ L +  +    YV +LE  +I + +  G+  C    G +G+W+           +RK+ AIGVR+Q G+  HG + N +  L  F  I+PCGI D  VTSL RE G  +  E+V
Sbjct:   12 PSPISVEHLGTIGYVDAWDRQRELAAERAENVGTDTLLLLEHPAVYTAGRR--------TEPEDRPTDGTPVIDVDRGGKITWHGPGQLVGYPIVKLAE-PVDVVRYVRRLEQALITVCTDLGI-VCGRVDGRSGVWLPASFDNGQWLPERKVAAIGVRVQRGVALHGFSLNCNSVLTGFDAIIPCGIRDAGVTSLSRELGRDVTVEEV 210          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_RHOOB (Octanoyltransferase OS=Rhodococcus opacus (strain B4) GN=lipB PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.554e-27
Identity = 75/208 (36.06%), Postives = 110/208 (52.88%), Query Frame = 1
Query:   49 PRSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKL-GAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKA--CPGQKG-------ETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDV 642
            P  + +  LG + Y DA   Q +L ++R  +  +DTLL L+HP  YT G+R        +E E +   G  +    RGG IT+HGP Q + YPI+ L +  +    YV +LE  +I + +  G+      G+ G       + G W+ +RK+ AIGVR+Q G+  HG + N +  L  F  I+PCGI D  VTSL RE G  +  E+V
Sbjct:   12 PSPISVEHLGTIGYVDAWDRQRELAAERAENLGADTLLLLEHPAVYTAGRR--------TEPEDRPTDGTPVIDVDRGGKITWHGPGQLVGYPIVKLAE-PVDVVRYVRRLEQALISVCTDLGIDCGRVDGRSGVWLPASLDNGQWLPERKVAAIGVRVQRGVALHGFSLNCNSVLTGFDAIIPCGIRDAGVTSLSRELGRDVTVEEV 210          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_GEOSL (Octanoyltransferase OS=Geobacter sulfurreducens GN=lipB PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.522e-27
Identity = 70/179 (39.11%), Postives = 98/179 (54.75%), Query Frame = 1
Query:   82 VNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETG 618
            + Y++A  LQE+L +D    +  +TLL L+HPP YTLG+R    +L        ++        RGGD+T+HGP Q + YPI+ L   G     Y+  LE  +++ A+  GV+A     G TGIW    K+ +IGV ++  +T HG A NI  DL  F  I PCGI    VT+L RE G
Sbjct:    1 MEYAEAFALQERLAADVAAGRAEETLLLLEHPPVYTLGRRGDGGSLPDPSVRPVEIN-------RGGDVTWHGPGQLVGYPILDLGCRGRDLHRYLRFLEQVLMDAAASLGVQAWR-VAGRTGIWTEGGKLASIGVGVRRWVTMHGFALNICNDLAPFSRIHPCGIVGCPVTTLSREAG 171          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_SALAI (Octanoyltransferase OS=Salinispora arenicola (strain CNS-205) GN=lipB PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.906e-27
Identity = 74/203 (36.45%), Postives = 108/203 (53.20%), Query Frame = 1
Query:   58 LQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQ-KGETGIWVGD------RKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVI 645
            L + R G ++Y  A + Q +L       K  D +L L+HP  YT GKR    +  +        G  +    RGG IT+HGP Q + YPI+ L D  +    YV ++E  +I++ + +G+ A  G+ +G +G+WV        RK+ AIG+R+  G+T HG + N D DL Y+  IVPCGI D  VTSL  E G P+   D +
Sbjct:    8 LTVLRAGTLDYEAAWEEQRRLHESVVTDKHGDAVLLLEHPSVYTAGKRTEPWDRPMD-------GTPVIDVDRGGKITWHGPGQLVGYPILRLPD-PVDVVAYVRRVEQMLIDVCAEFGLVA--GRIEGRSGVWVPADDRGPARKVAAIGIRVARGVTLHGFSLNCDCDLTYYDRIVPCGIRDAGVTSLAAELGRPVTVADAL 200          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_ANASP (Octanoyltransferase OS=Anabaena sp. (strain PCC 7120) GN=lipB PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.906e-27
Identity = 71/210 (33.81%), Postives = 113/210 (53.81%), Query Frame = 1
Query:   64 IWRLGIVNYSDALKLQEKLVSDRKIH-KISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQKGETGIWVGDRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRETGIPLPAEDVIHEQLVSCFARQFGYD 690
            ++  G++ Y  A   Q  L+  R  +  + D L+ L+HPP YTLG+     +L   + +  +   E+H  +RGG++T+H P Q + YPI++L         Y+ +LE  +I + ++Y +K        TG+W+  RK+ AIG+++   IT HG A N+ PD+  F  IVPCGI DK V SL +   IP    + +   +V  FA  FG +
Sbjct:   14 LYNKGLMPYLAAHAWQRSLLRQRIDYPNLEDVLILLEHPPVYTLGQ---GSSLEFLKFDPNQSEFEIHRIERGGEVTYHCPGQLVGYPILNLHRHRQDLHWYLRQLEEVIIRVLAVYDLKG-DRLPSLTGVWLEGRKVAAIGIKVSRWITMHGFALNVCPDMTGFSRIVPCGITDKPVGSLAQ--WIPGITCEEVRVHVVQAFAEVFGLE 217          
BLAST of DN621304 vs. ExPASy Swiss-Prot
Match: LIPB_PROAC (Octanoyltransferase OS=Propionibacterium acnes GN=lipB PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.713e-27
Identity = 72/208 (34.62%), Postives = 112/208 (53.85%), Query Frame = 1
Query:   10 PDGLYLYYQGMKVPRSLQIWRLGIVNYSDALKLQEKLVSDRKIHKISDTLLSLQHPPTYTLGKRRTDHNLLISEAELKKLGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLESTMIEIASLYGVKACPGQ-KGETGIWVG------DRKIGAIGVRIQYGITSHGLAFNIDPDLNYFKHIVPCGIADKDVTSLRRE 612
            P GL+  Y G+   R  +        Y++    Q ++ ++   H+  +T++ ++H P YT G+R                G  +    RGG+IT+HGP Q + YPI+ L+  G+G  +YV ++E  +I + S YG++A  G+  G TG+W        +RK+ AIG+R+      HG A NIDPD   F +I+PCGI+D DVTS+ RE
Sbjct:   28 PAGLHFEYLGIADSRPTR------TEYNECWAHQREVHAEVSAHQRPNTVIYVEHDPVYTAGRRTRKEAYPFD-------GTPVVPVDRGGEITWHGPGQLVGYPIVFLQR-GIGVVDYVRRVEEAVIRLVSQYGLRA--GRVPGRTGVWFPSDGMGPERKVCAIGIRVSRQTAMHGFALNIDPDTAGFDNIIPCGISDADVTSMARE 219          
The following BLAST results are available for this feature:
BLAST of DN621304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 436
Match NameE-valueIdentityDescription
LIPB_XANC81.190e-2734.27Octanoyltransferase OS=Xanthomonas campestris pv. ... [more]
LIPB_MYCUA1.190e-2738.92Octanoyltransferase OS=Mycobacterium ulcerans (str... [more]
LIPB_GEOBB1.190e-2735.26Octanoyltransferase OS=Geobacter bemidjiensis (str... [more]
LIPB_CORA71.190e-2735.27Octanoyltransferase OS=Corynebacterium aurimucosum... [more]
LIPB_RHOSR1.554e-2735.89Octanoyltransferase OS=Rhodococcus sp. (strain RHA... [more]
LIPB_RHOOB1.554e-2736.06Octanoyltransferase OS=Rhodococcus opacus (strain ... [more]
LIPB_GEOSL4.522e-2739.11Octanoyltransferase OS=Geobacter sulfurreducens GN... [more]
LIPB_SALAI5.906e-2736.45Octanoyltransferase OS=Salinispora arenicola (stra... [more]
LIPB_ANASP5.906e-2733.81Octanoyltransferase OS=Anabaena sp. (strain PCC 71... [more]
LIPB_PROAC7.713e-2734.62Octanoyltransferase OS=Propionibacterium acnes GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06I13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006I13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621304 ID=DN621304; Name=DN621304; organism=Citrus sinensis; type=EST; length=782bp
CCCCCTTCTCCTGACGGCCTGTATTTGTATTATCAGGGAATGAAAGTTCC
ACGGAGTTTACAGATCTGGAGACTGGGCATTGTCAACTACTCCGATGCAC
TTAAGCTGCAGGAAAAACTGGTCTCTGATAGAAAAATTCATAAGATTTCT
GATACCCTCTTGTCCCTTCAGCATCCACCCACGTATACCCTTGGAAAACG
GCGTACGGATCATAATTTATTAATTTCTGAGGCTGAACTGAAAAAGTTAG
GAGCTGAACTTCATTACACTCAGAGAGGAGGAGACATTACATTTCATGGT
CCCCACCAAGCAATTCTGTATCCCATTATTTCCCTTCGTGATATTGGACT
TGGTGCTCGAAATTATGTGGAGAAACTTGAGTCAACTATGATTGAAATAG
CATCACTATATGGAGTTAAAGCTTGCCCTGGACAAAAGGGTGAGACAGGA
ATTTGGGTTGGAGATAGAAAGATAGGTGCAATTGGAGTTCGGATACAATA
TGGAATTACTTCCCATGGGTTGGCATTCAACATAGATCCTGATTTGAACT
ATTTTAAGCATATCGTGCCTTGTGGGATTGCAGATAAAGATGTCACATCT
TTGAGAAGGGAGACAGGTATTCCGCTTCCTGCTGAAGATGTAATTCATGA
GCAGTTAGTTTCTTGTTTTGCTAGACAGTTTGGCTATGATAGTCTTATCT
GGAAGGATAATGTCTCAATATTGTCAGATAATTAGGAAGTCAATTGAGAT
GTATAGTATGCCTGGCAAATAAATCATGTAAA
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