DN621302

Overview
NameDN621302
Unique NameDN621302
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621302 vs. ExPASy Swiss-Prot
Match: PUR4_XYLFT (Phosphoribosylformylglycinamidine synthase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=purL PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 43/103 (41.75%), Postives = 56/103 (54.37%), Query Frame = -3
Query:  395 AHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREW 703
            AHGEG A F  D   D+   +H+A +RY +  G     YP N NGSP G+  + + DGR   +MPHPER        W P  W  D    +PWL++F+NAR W
Sbjct: 1226 AHGEGYAMF--DTPADQAA-AHVA-LRYINGHGQAATHYPLNPNGSPNGITGLTTTDGRITILMPHPERTPRTINLSWCPNEWGED----APWLRLFRNARAW 1320          
BLAST of DN621302 vs. ExPASy Swiss-Prot
Match: PUR4_XYLFA (Phosphoribosylformylglycinamidine synthase OS=Xylella fastidiosa GN=purL PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 43/103 (41.75%), Postives = 56/103 (54.37%), Query Frame = -3
Query:  395 AHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREW 703
            AHGEG A F  D   D+   +H+A +RY +  G     YP N NGSP G+  + + DGR   +MPHPER        W P  W  D    +PWL++F+NAR W
Sbjct: 1226 AHGEGYAMF--DTPADQAA-AHVA-LRYINGHGQAATHYPLNPNGSPNGITGLTTTDGRITILMPHPERTPRTINLSWSPNEWGED----TPWLRLFRNARAW 1320          
BLAST of DN621302 vs. ExPASy Swiss-Prot
Match: PUR4_NEIMB (Phosphoribosylformylglycinamidine synthase OS=Neisseria meningitidis serogroup B GN=purL PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.188e-12
Identity = 40/102 (39.22%), Postives = 52/102 (50.98%), Query Frame = -3
Query:  398 AHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 703
            +HGEGRA F   G    I       ++Y D     T+ YP N NGSP G+A + + DGR   MMPHPER +   Q  W P+ W       S W ++F  AR+
Sbjct: 1222 SHGEGRADFALHG--GNISADLGIALQYIDGQNQVTQTYPLNPNGSPQGIAGVTNADGRITIMMPHPERVYRAAQMSWKPEGWT----ELSGWYRLFAGARK 1317          
BLAST of DN621302 vs. ExPASy Swiss-Prot
Match: PUR4_NEIMA (Phosphoribosylformylglycinamidine synthase OS=Neisseria meningitidis serogroup A GN=purL PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.188e-12
Identity = 40/102 (39.22%), Postives = 53/102 (51.96%), Query Frame = -3
Query:  398 AHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 703
            +HGEGRA F   G    I       ++Y D     T+ YP N NGSP G+A + + DGR   MMPHPER +   Q  W P++W       S W ++F  AR+
Sbjct: 1222 SHGEGRADFALHG--GNISADLGIALQYVDGQNQITQTYPLNPNGSPQGIAGVTNADGRVTIMMPHPERVYRAAQMSWKPEDWT----ELSGWYRLFAGARK 1317          
BLAST of DN621302 vs. ExPASy Swiss-Prot
Match: PURQ_METTP (Phosphoribosylformylglycinamidine synthase 1 OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=purQ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12
Identity = 33/77 (42.86%), Postives = 41/77 (53.25%), Query Frame = -3
Query:  473 AHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYP 703
            AH EG     D  V++R++       RYC   G     +P NVNGS   +A I +P+G  L MMPHPER F  WQ P
Sbjct:  158 AHAEGNLVASDRKVIERLIEDDQIVFRYCSPQGEIINEFPVNVNGSTENIAGISNPEGNVLGMMPHPERAFFAWQLP 234          
BLAST of DN621302 vs. ExPASy Swiss-Prot
Match: PUR4_NEIG1 (Phosphoribosylformylglycinamidine synthase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=purL PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11
Identity = 40/102 (39.22%), Postives = 51/102 (50.00%), Query Frame = -3
Query:  398 AHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 703
            +HGEGRA F   G    I       ++Y D     T+ YP N NGSP G+A I + DGR   MMPHPER +   Q    P+ W       S W ++F  AR+
Sbjct: 1216 SHGEGRADFALHG--GNISADLGIALQYVDGQNQVTQTYPLNPNGSPQGIAGITNADGRVTIMMPHPERVYRAAQMSRKPEGWT----ELSGWYRLFAGARK 1311          
The following BLAST results are available for this feature:
BLAST of DN621302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
PUR4_XYLFT3.694e-1441.75Phosphoribosylformylglycinamidine synthase OS=Xyle... [more]
PUR4_XYLFA3.694e-1441.75Phosphoribosylformylglycinamidine synthase OS=Xyle... [more]
PUR4_NEIMB1.188e-1239.22Phosphoribosylformylglycinamidine synthase OS=Neis... [more]
PUR4_NEIMA1.188e-1239.22Phosphoribosylformylglycinamidine synthase OS=Neis... [more]
PURQ_METTP2.027e-1242.86Phosphoribosylformylglycinamidine synthase 1 OS=Me... [more]
PUR4_NEIG13.823e-1139.22Phosphoribosylformylglycinamidine synthase OS=Neis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06I12_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006I12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621302 ID=DN621302; Name=DN621302; organism=Citrus sinensis; type=EST; length=705bp
TTTTTTTTTTTTTTTTTATGTGCAGGCTGCATTTATGCCCTTATAACAAA
GAACTTATGCAACCAAAAATGTATAATTTTCATTTAAAAGTAGTTAAGTA
TCCTATATGATGAAATATGTCCATTTTTCAGTTATTGTTTGACGTAATTC
TTGCAAATAAAATTATCAAAAGAAATTAACACATCGGATGTCTTCTAAAA
TTGGCCTAAATCAGAAGCCAAATACAACTCACTTCAAAATGTCTGCAGAT
TTTTTTTGTAGCAATCAGAGCCCTGGTTTCCCGGCATCAAACATACCATA
CATCAGCACAGAAATGAATCAGCGAGCAATTAGAGGCAGCAACCTTCCTG
AAGGGAAAATGGAAAGGGGGAGTTACTAACCCATCTCAAGAACACCATTC
TCTGGCATTTTGGAACATCTTTAACCATGGGCTAGGGCCCTTTTTGTCCA
CATTCCAGTTCTTGGGGTACCACGGGTACTGCCACATTAAGAAGCAACGC
TCTGGATGAGGCATCATAGCAAGATGTCTTCCATCGGGTGAACAAATTGC
TGCCACTCCTAAGGGAGAGCCATTCACATTAAAAGGGTAAACTTCTGTAG
GATTTCCATCATCATCACAATATCTTACTGGAGCCAAATGTGAATGAAGG
ATACGATCAAGAACACCATCATCAGGGAAATACGCTCTACCCTCACCATG
GGCAG
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