DN621292

Overview
NameDN621292
Unique NameDN621292
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length347
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.581e-29
Identity = 60/83 (72.29%), Postives = 71/83 (85.54%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVAEKV+V  KHNDDEQY WES AGGSFTV  D  GE +GRGTK+ LHLKEDQ EYLEERR+K+++KKHS+FI YPI+L++
Sbjct:  136 AYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL 217
[Close]
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 1.581e-29
Identity = 60/83 (72.29%), Postives = 71/83 (85.54%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVAEKV+V  KHNDDEQY WES AGGSFTV  D  GE +GRGTK+ LHLKEDQ EYLEERR+K+++KKHS+FI YPI+L++
Sbjct:  136 AYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL 217
[Close]
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HS90B_MACFA (Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.581e-29
Identity = 60/83 (72.29%), Postives = 71/83 (85.54%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVAEKV+V  KHNDDEQY WES AGGSFTV  D  GE +GRGTK+ LHLKEDQ EYLEERR+K+++KKHS+FI YPI+L++
Sbjct:  136 AYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL 217
[Close]
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HS90B_HUMAN (Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4)

HSP 1 Score: 127.872 bits (320), Expect = 1.581e-29
Identity = 60/83 (72.29%), Postives = 71/83 (85.54%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVAEKV+V  KHNDDEQY WES AGGSFTV  D  GE +GRGTK+ LHLKEDQ EYLEERR+K+++KKHS+FI YPI+L++
Sbjct:  136 AYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL 217
[Close]
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 1.581e-29
Identity = 60/83 (72.29%), Postives = 71/83 (85.54%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVAEKV+V  KHNDDEQY WES AGGSFTV  D  GE +GRGTK+ LHLKEDQ EYLEERR+K+++KKHS+FI YPI+L++
Sbjct:  136 AYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL 217
[Close]
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 1.581e-29
Identity = 60/83 (72.29%), Postives = 71/83 (85.54%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVAEKV+V  KHNDDEQY WES AGGSFTV  D  GE +GRGTK+ LHLKEDQ EYLEERR+K+++KKHS+FI YPI+L++
Sbjct:  136 AYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL 217
[Close]
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HS90A_CHICK (Heat shock protein HSP 90-alpha OS=Gallus gallus GN=HSP90AA1 PE=3 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 2.064e-29
Identity = 61/83 (73.49%), Postives = 70/83 (84.34%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  D +GE LGRGTK+ LHLKEDQ EYLEERR+K+++KKHS+FI YPI L++
Sbjct:  140 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRLD-NGEPLGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPIRLFV 221
[Close]
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.521e-29
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GE +GRGTK+  HLKEDQ EYLEERR+K+++KKHS+FI YPI+L++
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVIPHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFV 222
[Close]
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.006e-29
Identity = 59/83 (71.08%), Postives = 71/83 (85.54%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVAEKV+V  KHNDDEQY WES AGGSFTV  D  GE +GRGTK+ L+LKEDQ EYLEERR+K+++KKHS+FI YPI+L++
Sbjct:  136 AYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRTD-HGEPIGRGTKVILYLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYV 217
[Close]
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HS902_HUMAN (Putative heat shock protein HSP 90-alpha A2 OS=Homo sapiens GN=HSP90AA2 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 6.006e-29
Identity = 59/83 (71.08%), Postives = 70/83 (84.34%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GE +GRGTK+ LHLKEDQ EYLEE+R+K+++KKHS+ I YPI+L++
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GERMGRGTKVILHLKEDQTEYLEEQRIKEIVKKHSQLIGYPITLFV 222
The following BLAST results are available for this feature:
BLAST of DN621292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
HS90B_PONAB1.581e-2972.29Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]
HS90B_MOUSE1.581e-2972.29Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]
HS90B_MACFA1.581e-2972.29Heat shock protein HSP 90-beta OS=Macaca fascicula... [more]
HS90B_HUMAN1.581e-2972.29Heat shock protein HSP 90-beta OS=Homo sapiens GN=... [more]
HS90B_HORSE1.581e-2972.29Heat shock protein HSP 90-beta OS=Equus caballus G... [more]
HS90B_BOVIN1.581e-2972.29Heat shock protein HSP 90-beta OS=Bos taurus GN=HS... [more]
HS90A_CHICK2.064e-2973.49Heat shock protein HSP 90-alpha OS=Gallus gallus G... [more]
HS90A_PANTR3.521e-2972.29Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HS90B_CHICK6.006e-2971.08Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]
HS902_HUMAN6.006e-2971.08Putative heat shock protein HSP 90-alpha A2 OS=Hom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06I06_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006I06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621292 ID=DN621292; Name=DN621292; organism=Citrus sinensis; type=EST; length=347bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCCGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCTTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATT
TGATTAAGAAGCACTCTGAGTTCATTAGTTACCCAATTTCCCTCTGGATT
GAGAAGACCACTGAGAAGGAGATTTCTGATGATGAGGACGAGGAAGAAAA
GAAAGATGAGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGA
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