DN621292

Overview
NameDN621292
Unique NameDN621292
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length347
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.029e-25
Identity = 51/81 (62.96%), Postives = 67/81 (82.72%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLW 247
            YLVA+ V V +KHNDD+QY+WES+A GSF ++ DT  E LGRGT+I LHL+++  EYLEE +LKDL+KK+SEFI++PI LW
Sbjct:  204 YLVADYVEVVSKHNDDKQYVWESKADGSFAISEDTWNEPLGRGTEIKLHLRDEAKEYLEEGKLKDLVKKYSEFINFPIYLW 284          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.872e-25
Identity = 57/83 (68.67%), Postives = 65/83 (78.31%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVA++V V +K+NDDE Y WES AGG+FTVT     +L  RGT+I LHLKEDQ EYLEERRLKDLIKKHSEFI Y I L +
Sbjct:  126 AYLVADRVTVVSKNNDDEAYTWESSAGGTFTVTPTPDCDLK-RGTRIVLHLKEDQQEYLEERRLKDLIKKHSEFIGYDIELMV 207          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP90_PODAN (Heat shock protein 90 homolog OS=Podospora anserina GN=MOD-E PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 8.975e-25
Identity = 52/83 (62.65%), Postives = 69/83 (83.13%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVA++V V +K+NDDEQYIWES AGG+F ++ D +G  +GRGTKI LHLK++Q +YL E ++K++IKKHSEFISYPI L +
Sbjct:  126 AYLVADRVTVVSKNNDDEQYIWESSAGGTFNISPD-NGPSIGRGTKIILHLKDEQTDYLNESKIKEVIKKHSEFISYPIYLHV 207          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP83_DROPB (Heat shock protein 83 (Fragment) OS=Drosophila pseudoobscura bogotana GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 8.975e-25
Identity = 51/78 (65.38%), Postives = 66/78 (84.62%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYP 235
            AYL+A++V VT+K+NDDEQY+WES AGGSFTV  D S E LGRGTKI L++KEDQ +YLEE ++K+++ KHS+FI YP
Sbjct:  129 AYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKADNS-EPLGRGTKIXLYIKEDQTDYLEESKIKEIVNKHSQFIGYP 205          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 8.975e-25
Identity = 50/82 (60.98%), Postives = 67/82 (81.71%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLW 247
            AYLVA+ + V +KHNDD QY+WES+A G F V+ DT  E LGRGT+I LHL+++  EYLEE +LK+L+K++SEFI++PISLW
Sbjct:  202 AYLVADYIEVISKHNDDSQYVWESKANGKFAVSEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKRYSEFINFPISLW 283          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 2.611e-24
Identity = 53/83 (63.86%), Postives = 66/83 (79.52%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVA++V VT+K+N DE Y+WES A G+FT+T     ++  RGT+ITLHLKEDQ+EYLE RRLK+LIKKHSEFI Y I L +
Sbjct:  126 AYLVADRVTVTSKNNSDESYVWESSACGTFTITSTPESDMK-RGTRITLHLKEDQMEYLEPRRLKELIKKHSEFIGYDIELMV 207          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.411e-24
Identity = 55/83 (66.27%), Postives = 65/83 (78.31%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            AYLVA++V V +K+N+D+ Y WES AGG+FTVT     +L  RGT+I LHLKEDQ EYLEERRLKDLIKKHSEFI Y I L +
Sbjct:  126 AYLVADRVTVVSKNNEDDAYTWESSAGGTFTVTSTPDCDLK-RGTRIVLHLKEDQQEYLEERRLKDLIKKHSEFIGYDIELMV 207          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.454e-24
Identity = 51/83 (61.45%), Postives = 67/83 (80.72%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWI 250
            A+LVA+KV+V +KHNDD+ Y WES AGGSF + +    EL  RGTKITL++KEDQ +YLEERR+K+++KKHS+FI YPI L +
Sbjct:  131 AFLVADKVVVASKHNDDDCYQWESSAGGSFIIRQVNDPELT-RGTKITLYIKEDQTDYLEERRIKEIVKKHSQFIGYPIKLTV 212          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.771e-23
Identity = 49/81 (60.49%), Postives = 67/81 (82.72%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISL 244
            A+LVA+KV+VT+K+NDD+ Y WES AGGSF V      EL  RGTKIT+++KEDQ+++LEER++K+++KKHS+FI YPI L
Sbjct:  129 AFLVADKVVVTSKNNDDDSYQWESSAGGSFVVRPYNDPELT-RGTKITMYIKEDQVDFLEERKIKEIVKKHSQFIGYPIKL 208          
BLAST of DN621292 vs. ExPASy Swiss-Prot
Match: HSP90_CAEEL (Heat shock protein 90 OS=Caenorhabditis elegans GN=daf-21 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.925e-23
Identity = 48/81 (59.26%), Postives = 66/81 (81.48%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISL 244
            A+LVA+KV+VT+K+NDD+ Y WES AGGSF V      E+  RGTKI +H+KEDQ+++LEER++K+++KKHS+FI YPI L
Sbjct:  129 AFLVADKVVVTSKNNDDDSYQWESSAGGSFVVRPFNDPEVT-RGTKIVMHIKEDQIDFLEERKIKEIVKKHSQFIGYPIKL 208          
The following BLAST results are available for this feature:
BLAST of DN621292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
ENPL_HORVU4.029e-2562.96Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
HSP85_TRYCR6.872e-2568.67Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]
HSP90_PODAN8.975e-2562.65Heat shock protein 90 homolog OS=Podospora anserin... [more]
HSP83_DROPB8.975e-2565.38Heat shock protein 83 (Fragment) OS=Drosophila pse... [more]
ENPL_ARATH8.975e-2560.98Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
HSP83_LEIIN2.611e-2463.86Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
HSP83_TRYBB3.411e-2466.27Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HSP90_BRUPA4.454e-2461.45Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
HSP90_CAEBR3.771e-2360.49Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]
HSP90_CAEEL4.925e-2359.26Heat shock protein 90 OS=Caenorhabditis elegans GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06I06_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006I06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621292 ID=DN621292; Name=DN621292; organism=Citrus sinensis; type=EST; length=347bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCCGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCTTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATT
TGATTAAGAAGCACTCTGAGTTCATTAGTTACCCAATTTCCCTCTGGATT
GAGAAGACCACTGAGAAGGAGATTTCTGATGATGAGGACGAGGAAGAAAA
GAAAGATGAGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGA
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