DN621284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A3_NICPL (Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.825e-31 Identity = 66/113 (58.41%), Postives = 84/113 (74.34%), Query Frame = 2 Query: 251 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 589 SF MG++++LLRG+Y YGFEKPSAIQQR ++P G DVI QAQSGTGKT+ + Q +D + QAL+L+PTRELA Q EKV+ A+GDY+ V+ HAC+GG SV ED R Sbjct: 19 SFAEMGIKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMIALTVCQIVDTKSSEVQALILSPTRELAAQTEKVILAIGDYINVQAHACIGGKSVGEDIR 131
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_LODEL (ATP-dependent RNA helicase eIF4A OS=Lodderomyces elongisporus GN=TIF1 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.066e-31 Identity = 66/119 (55.46%), Postives = 87/119 (73.11%), Query Frame = 2 Query: 227 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 ++YD V FD + L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTATF LQ++D QAL+LAPTRELA QI+ V+ ++G YL V VHA +GGTS+ +D Sbjct: 16 SNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMSDD 134
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: FAL1_ASHGO (ATP-dependent RNA helicase FAL1 OS=Ashbya gossypii GN=FAL1 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.066e-31 Identity = 69/114 (60.53%), Postives = 83/114 (72.81%), Query Frame = 2 Query: 242 VYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 V +F++M LQENLLRGIY YGFE PSAIQ R I +G DVI QAQSGTGKTATF G+LQ +D QALVL+PTRELA QI +V+R LGDY+ V AC GG ++++D Sbjct: 21 VSPTFESMKLQENLLRGIYGYGFEAPSAIQSRAITQIIRGKDVIAQAQSGTGKTATFTIGMLQVIDSSSKDLQALVLSPTRELAAQISQVVRNLGDYMNVVALACTGGKALQQD 134
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_CANAL (ATP-dependent RNA helicase eIF4A OS=Candida albicans GN=TIF1 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.310e-31 Identity = 67/119 (56.30%), Postives = 87/119 (73.11%), Query Frame = 2 Query: 227 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 T+YD V FD + L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTATF LQ+++ QAL+LAPTRELA QI+ V+ A+G YL V VHA +GGTS+ +D Sbjct: 16 TNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRINENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDD 134
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: FAL1_LODEL (ATP-dependent RNA helicase FAL1 OS=Lodderomyces elongisporus GN=FAL1 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 6.935e-31 Identity = 65/115 (56.52%), Postives = 86/115 (74.78%), Query Frame = 2 Query: 239 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 +V+ +F++M L+ LL+GIYAYGFE PSAIQ R I+ G D I QAQSGTGKTATF G+L+ LD +CQALVL+PTRELA QI+ V++ LGDY+ ++ +AC+GG +V D Sbjct: 23 KVHRTFESMRLKPELLKGIYAYGFEAPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGMLEVLDSKSKECQALVLSPTRELATQIQNVIKHLGDYMNIQTYACIGGKNVGTD 137
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: RH2_ARATH (DEAD-box ATP-dependent RNA helicase 2 OS=Arabidopsis thaliana GN=RH2 PE=2 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 3.442e-30 Identity = 63/117 (53.85%), Postives = 85/117 (72.65%), Query Frame = 2 Query: 239 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 589 E SF+ MG++E++LRG+Y YGFEKPSAIQQR ++P +G DVI QAQSGTGKT+ + Q +D + QAL+L+PTRELA Q EK ++A+G + ++ HAC+GG SV ED R Sbjct: 32 EPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIR 148
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: FAL1_CANGA (ATP-dependent RNA helicase FAL1 OS=Candida glabrata GN=FAL1 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.308e-29 Identity = 66/111 (59.46%), Postives = 81/111 (72.97%), Query Frame = 2 Query: 251 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 +F++M L+E LLRGIY+YGFE PSAIQ R I G DVI QAQSGTGKTATF G+LQ +D QALVL+PTRELA QI KV+ LGDY+ VK +A GG ++++D Sbjct: 24 TFESMDLKEGLLRGIYSYGFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTIGMLQAIDLKKHDLQALVLSPTRELAAQIGKVVTNLGDYMNVKAYAMTGGKTMKDD 134
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: FAL1_KLULA (ATP-dependent RNA helicase FAL1 OS=Kluyveromyces lactis GN=FAL1 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.708e-29 Identity = 66/115 (57.39%), Postives = 82/115 (71.30%), Query Frame = 2 Query: 239 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 +V +F++M L+ +LLRGIY YGFE PS+IQ R I G DVI QAQSGTGKTATF G+LQ +D + QALVL+PTRELA Q E V+ LGDYL V HAC GG ++++D Sbjct: 20 KVSATFESMNLKPDLLRGIYFYGFEYPSSIQSRAISQIISGKDVIAQAQSGTGKTATFTIGLLQAIDSKSKELQALVLSPTRELASQSESVISNLGDYLNVTAHACTGGKALQQD 134
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.491e-29 Identity = 63/115 (54.78%), Postives = 83/115 (72.17%), Query Frame = 2 Query: 239 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 ++ +F++M L+++LLRGIY YGFE PSAIQ R I G DVI QAQSGTGKTATF G+LQ +D QALVL+PTRELA QI +V+ LGDY+ V+ +A GG ++++D Sbjct: 20 KISPTFESMNLKDDLLRGIYGYGFEAPSAIQSRAITQIISGTDVIAQAQSGTGKTATFTIGMLQAIDLKRKDLQALVLSPTRELASQINQVVSNLGDYMNVQSYAMTGGKTMKDD 134
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: FAL1_YEAST (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae GN=FAL1 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.107e-28 Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 2 Query: 239 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 +V +F++M L+++LLRGIY+YGFE PS+IQ R I G DVI QAQSGTGKTATF G+LQ +D QAL+L+PTRELA QI +V++ LGDY+ V A GG ++++D Sbjct: 20 KVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDD 134 The following BLAST results are available for this feature:
BLAST of DN621284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 376
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621284 ID=DN621284; Name=DN621284; organism=Citrus sinensis; type=EST; length=594bpback to top |