DN621284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: FAL1_YEAS7 (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) GN=FAL1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.107e-28 Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 2 Query: 239 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 +V +F++M L+++LLRGIY+YGFE PS+IQ R I G DVI QAQSGTGKTATF G+LQ +D QAL+L+PTRELA QI +V++ LGDY+ V A GG ++++D Sbjct: 20 KVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDD 134
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_LEIBR (Probable eukaryotic initiation factor 4A OS=Leishmania braziliensis GN=LbrM01_V2.0740 PE=3 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.446e-28 Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 251 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHAC---VGGTSVREDQR 589 SFD M L +NLLRGIY+YGFEKPS+IQQR I PF +G D+I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L C VGGT V++D R Sbjct: 27 SFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSAKFCETFVGGTRVQDDLR 142
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_LEIMA (Probable eukaryotic initiation factor 4A OS=Leishmania major GN=LMJ_0078 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.467e-28 Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 251 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHAC---VGGTSVREDQR 589 SFD M L +NLLRGIY+YGFEKPS+IQQR I PF +G D+I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L C VGGT V++D R Sbjct: 27 SFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCETFVGGTRVQDDLR 142
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_LEIIN (Probable eukaryotic initiation factor 4A OS=Leishmania infantum GN=LinJ01.0780 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.467e-28 Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 251 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHAC---VGGTSVREDQR 589 SFD M L +NLLRGIY+YGFEKPS+IQQR I PF +G D+I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L C VGGT V++D R Sbjct: 27 SFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCETFVGGTRVQDDLR 142
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: RH34_ARATH (DEAD-box ATP-dependent RNA helicase 34 OS=Arabidopsis thaliana GN=RH34 PE=2 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.224e-27 Identity = 57/111 (51.35%), Postives = 79/111 (71.17%), Query Frame = 2 Query: 251 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 SFD MG+ + +LRG+Y YG++KPS IQQR +VP KG DVI QAQSGTGKT+ + Q ++ + Q LVL+P+RELA Q EK ++A+G + ++ HAC+GG S+ ED Sbjct: 23 SFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGED 133
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_TRYBB (Probable eukaryotic initiation factor 4A OS=Trypanosoma brucei brucei GN=Tb09.160.3270 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.088e-27 Identity = 65/117 (55.56%), Postives = 83/117 (70.94%), Query Frame = 2 Query: 251 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHA----CVGGTSVREDQR 589 SFD M L +NLLRGIY++GFEKPS+IQQR IVPF +G D+I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L + VGGT V++D R Sbjct: 27 SFDDMPLHQNLLRGIYSHGFEKPSSIQQRAIVPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNVLQGLVLSPTRELAMQTAEVITRIGEFLAEGSSSFCATFVGGTRVQDDYR 143
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_TRYCR (Probable eukaryotic initiation factor 4A OS=Trypanosoma cruzi GN=Tc00.1047053511585.190 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.652e-27 Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 251 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVK----VHACVGGTSVREDQR 589 SFD M L +NLLRGIY++GFEKPS+IQQR IVPF +G D+I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L VGGT V++D R Sbjct: 27 SFDDMPLHQNLLRGIYSHGFEKPSSIQQRAIVPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNVLQGLVLSPTRELALQTAEVITRIGEFLAEGNSSFCATFVGGTRVQDDYR 143
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A2_ORYSJ (Putative eukaryotic initiation factor 4A-2 OS=Oryza sativa subsp. japonica GN=Os02g0221300 PE=3 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 1.954e-25 Identity = 63/155 (40.65%), Postives = 87/155 (56.13%), Query Frame = 2 Query: 128 DMAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 592 D +AP ++++ T ++++T G F + E+L+ +KPSA+ QRGIVP C GLD+IQQ+ GT T T C GILQ+LDY +CQALVL PT +LA + + V+ LG +L K HA GGTS EDQ+I Sbjct: 24 DSNSIAPSAIAINSKKKQTT-KDIVTTQGAQF---------------ISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQI 160
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: FAL1_PHANO (ATP-dependent RNA helicase FAL1 OS=Phaeosphaeria nodorum GN=FAL1 PE=3 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 6.287e-24 Identity = 63/125 (50.40%), Postives = 75/125 (60.00%), Query Frame = 2 Query: 218 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 589 +F TS + V +F+AM L+ENLLRGIYAYG+E PSA+Q R IV CKG D I QAQSGTGKTATF ILQ V+ LGDY+ V+ HAC+GGT+V ED R Sbjct: 14 EFSTSKEVTVAPTFEAMHLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISILQS-------------------------VIMGLGDYMNVQCHACIGGTNVGEDIR 113
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: DHH1_PICST (ATP-dependent RNA helicase DHH1 OS=Pichia stipitis GN=DHH1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.814e-21 Identity = 53/111 (47.75%), Postives = 73/111 (65.77%), Query Frame = 2 Query: 251 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 SF+ L+ LL GI+ GFEKPS IQ+ I G DV+ +A++GTGKTA+F LQQ+ L + QAL+L PTRELA Q +V+R LG +LG++ GGTS+++D Sbjct: 31 SFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDVLARAKNGTGKTASFIIPSLQQIKPKLNKIQALILVPTRELALQTSQVVRTLGKHLGIQCMVTTGGTSLKDD 141 The following BLAST results are available for this feature:
BLAST of DN621284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 376
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621284 ID=DN621284; Name=DN621284; organism=Citrus sinensis; type=EST; length=594bpback to top |